Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_020902 Daucus carota HOM05D001778 ORTHO05D006754 3.4e-217 758.1 391 100.0
Dinv41429 Davidia involucrata HOM05D001778 ORTHO05D006754 1.1e-58 231.5 326 44.8
Atru.chr7.237 Acer truncatum HOM05D001778 ORTHO05D006754 1.0e-56 224.9 376 41.5
Prupe.7G255200 Prunus persica HOM05D001778 ORTHO05D006754 1.4e-56 224.6 388 40.5
CSS0018906 Camellia sinensis var. sinensis HOM05D001778 ORTHO05D006754 1.5e-55 221.1 378 40.5
QL02p091165 Quercus lobata HOM05D001778 ORTHO05D006754 2.8e-54 216.9 378 39.7
TAR625G0975 Trochodendron aralioides HOM05D001778 ORTHO05D006754 1.2e-49 201.4 380 39.5
RcHm_v2.0_Chr2g0086731 Rosa chinensis HOM05D001778 ORTHO05D006754 3.0e-48 196.8 379 39.3
Manes.14G138100 Manihot esculenta HOM05D001778 ORTHO05D006754 6.8e-48 195.7 380 36.1
Cfa020898 Carpinus fangiana HOM05D001778 ORTHO05D006754 1.5e-47 194.5 333 39.3
Haze_19342 Corylus avellana HOM05D001778 ORTHO05D006754 1.5e-47 194.5 428 35.5
Lj9A707G51 Lonicera japonica HOM05D001778 ORTHO05D006754 3.4e-47 193.4 380 39.7
COL.COLO4_24112 Corchorus olitorius HOM05D001778 ORTHO05D006754 5.7e-47 192.6 378 38.6
Actinidia04242 Actinidia chinensis HOM05D001778 ORTHO05D006754 1.7e-46 191.0 381 38.3
Thecc.09G141100 Theobroma cacao HOM05D001778 ORTHO05D006754 2.2e-46 190.7 379 38.3
FAN19G2821 Fragaria x ananassa HOM05D001778 ORTHO05D006754 2.9e-46 190.3 372 39.0
MD02G1013400 Malus domestica HOM05D001778 ORTHO05D006754 2.9e-46 190.3 388 36.9
FAN28G2191 Fragaria x ananassa HOM05D001778 ORTHO05D006754 3.7e-46 189.9 376 39.1
Nn8g39707 Nelumbo nucifera HOM05D001778 ORTHO05D006754 3.7e-46 189.9 379 36.4
FvH4_1g01770 Fragaria vesca HOM05D001778 ORTHO05D006754 4.9e-46 189.5 376 39.1
FAN26G1059 Fragaria x ananassa HOM05D001778 ORTHO05D006754 4.9e-46 189.5 378 38.6
MD15G1160200 Malus domestica HOM05D001778 ORTHO05D006754 6.4e-46 189.1 390 37.7
Nn2g12229 Nelumbo nucifera HOM05D001778 ORTHO05D006754 2.4e-45 187.2 383 37.3
FAN23G0031 Fragaria x ananassa HOM05D001778 ORTHO05D006754 4.1e-45 186.4 378 38.1
TAR626G1981 Trochodendron aralioides HOM05D001778 ORTHO05D006754 1.2e-44 184.9 380 36.6
Duzib168G2395 Durio zibethinus HOM05D001778 ORTHO05D006754 2.0e-44 184.1 380 38.4
Manes.06G041400 Manihot esculenta HOM05D001778 ORTHO05D006754 2.0e-44 184.1 381 36.0
Actinidia21913 Actinidia chinensis HOM05D001778 ORTHO05D006754 5.9e-44 182.6 370 38.9
CiPaw.15G183000 Carya illinoinensis HOM05D001778 ORTHO05D006754 7.8e-44 182.2 378 36.5
Cc06_g07470 Coffea canephora HOM05D001778 ORTHO05D006754 7.8e-44 182.2 384 37.2
TWI63G1506 Tripterygium wilfordii HOM05D001778 ORTHO05D006754 1.3e-43 181.4 384 36.5
Duzib150G0892 Durio zibethinus HOM05D001778 ORTHO05D006754 1.7e-43 181.0 379 37.5
Ciclev10007967m.g Citrus clementina HOM05D001778 ORTHO05D006754 6.6e-43 179.1 373 35.4
CSS0028105 Camellia sinensis var. sinensis HOM05D001778 ORTHO05D006754 3.3e-42 176.8 269 41.3
Hma1.2p1_0182F.1_g080420 Hydrangea macrophylla HOM05D001778 ORTHO05D006754 6.2e-41 172.6 372 39.0
Nitab4.5_0001021g0130 Nicotiana tabacum HOM05D001778 ORTHO05D006754 1.0e-40 171.8 372 37.9
TAR383G0731 Trochodendron aralioides HOM05D001778 ORTHO05D006754 1.4e-40 171.4 389 36.8
Nitab4.5_0001555g0070 Nicotiana tabacum HOM05D001778 ORTHO05D006754 3.1e-40 170.2 372 37.4
Sopen07g003250 Solanum pennellii HOM05D001778 ORTHO05D006754 9.8e-39 165.2 366 35.5
TAR636G1754 Trochodendron aralioides HOM05D001778 ORTHO05D006754 1.3e-38 164.9 340 36.5
Solyc07g007200.4 Solanum lycopersicum HOM05D001778 ORTHO05D006754 1.7e-38 164.5 365 35.6
Rhsim01G0052300 Rhododendron simsii HOM05D001778 ORTHO05D006754 2.2e-38 164.1 367 39.8
Migut.K00384 Erythranthe guttata HOM05D001778 ORTHO05D006754 3.7e-38 163.3 368 38.6
PGSC0003DMG400030695 Solanum tuberosum HOM05D001778 ORTHO05D006754 4.9e-38 162.9 365 35.9
Lj4g0022620 Lotus japonicus HOM05D001778 ORTHO05D006754 5.4e-37 159.5 381 34.9
MBI15_g30249_MAGBIO Magnolia biondii HOM05D001778 ORTHO05D006754 7.0e-37 159.1 386 37.0
Glyma.17G105500 Glycine max HOM05D001778 ORTHO05D006754 9.2e-37 158.7 384 35.9
Dinv44026 Davidia involucrata HOM05D001778 ORTHO05D006754 1.6e-36 157.9 375 36.0
SGA_v2.0_scaffold183G39869 Striga asiatica HOM05D001778 ORTHO05D006754 1.6e-36 157.9 363 35.5
Aqoxy7G03539 Aquilegia oxysepala HOM05D001778 ORTHO05D006754 7.8e-36 155.6 388 36.9
Glyma.13G165500 Glycine max HOM05D001778 ORTHO05D006754 5.0e-35 152.9 387 34.9
CSS0031767 Camellia sinensis var. sinensis HOM05D001778 ORTHO05D006754 6.6e-35 152.5 378 34.1
CSS0045678 Camellia sinensis var. sinensis HOM05D001778 ORTHO05D006754 6.6e-35 152.5 378 34.1
TWI34G0943 Tripterygium wilfordii HOM05D001778 ORTHO05D006754 4.3e-34 149.8 390 32.8
Oeu055920.1 Olea europaea HOM05D001778 ORTHO05D006754 2.1e-33 147.5 338 35.2
Potri.006G190500 Populus trichocarpa HOM05D001778 ORTHO05D006754 6.2e-33 146.0 336 33.0
Gohir.A06G050400 Gossypium hirsutum HOM05D001778 ORTHO05D006754 3.1e-32 143.7 379 33.5
arahy.Tifrunner.gnm1.ann1.6Y3UBL Arachis hypogaea HOM05D001778 ORTHO05D006754 6.8e-32 142.5 382 34.8
Gohir.D08G258000 Gossypium hirsutum HOM05D001778 ORTHO05D006754 8.9e-32 142.1 377 35.3
Gohir.D06G049700 Gossypium hirsutum HOM05D001778 ORTHO05D006754 2.0e-31 141.0 378 31.7
Gohir.A08G237400 Gossypium hirsutum HOM05D001778 ORTHO05D006754 3.4e-31 140.2 377 33.7
Gorai.004G275100 Gossypium raimondii HOM05D001778 ORTHO05D006754 3.4e-31 140.2 377 35.0
Gorai.010G056600 Gossypium raimondii HOM05D001778 ORTHO05D006754 4.4e-31 139.8 379 32.5
Oeu051708.1 Olea europaea HOM05D001778 ORTHO05D006754 4.4e-31 139.8 259 38.6
Sabra18G0097600 Salix brachista HOM05D001778 ORTHO05D006754 1.3e-30 138.3 378 30.7
CANSAT11G2321 Cannabis sativa HOM05D001778 ORTHO05D006754 2.2e-30 137.5 377 33.2
arahy.Tifrunner.gnm1.ann1.8YJ5TP Arachis hypogaea HOM05D001778 ORTHO05D006754 2.9e-30 137.1 382 34.0
Lalb_Chr13g0301211 Lupinus albus HOM05D001778 ORTHO05D006754 8.3e-30 135.6 381 32.5
Peaxi162Scf00391g00112 Petunia axillaris HOM05D001778 ORTHO05D006754 1.1e-29 135.2 326 33.1
Lalb_Chr12g0198491 Lupinus albus HOM05D001778 ORTHO05D006754 2.4e-29 134.0 384 31.2
Actinidia21615 Actinidia chinensis HOM05D001778 ORTHO05D006754 3.2e-29 133.7 371 32.1
VMungo1215G0692 Vigna mungo HOM05D001778 ORTHO05D006754 3.2e-29 133.7 382 33.2
Potri.018G114700 Populus trichocarpa HOM05D001778 ORTHO05D006754 5.4e-29 132.9 262 35.1
PGSC0003DMG401001720 Solanum tuberosum HOM05D001778 ORTHO05D006754 7.1e-29 132.5 205 45.4
Solyc01g088640.4 Solanum lycopersicum HOM05D001778 ORTHO05D006754 1.6e-28 131.3 362 35.6
Medtr4g116460 Medicago truncatula HOM05D001778 ORTHO05D006754 2.7e-28 130.6 382 32.7
Nitab4.5_0005064g0020 Nicotiana tabacum HOM05D001778 ORTHO05D006754 4.6e-28 129.8 180 46.7
MELO3C010268.2 Cucumis melo HOM05D001778 ORTHO05D006754 1.0e-27 128.6 378 31.7
CsaV3_1G028450 Cucumis sativus L. HOM05D001778 ORTHO05D006754 1.0e-27 128.6 386 32.1
Nitab4.5_0007434g0030 Nicotiana tabacum HOM05D001778 ORTHO05D006754 1.0e-27 128.6 181 47.5
Psat4g033440 Pisum sativum HOM05D001778 ORTHO05D006754 1.3e-27 128.3 383 31.9
Sopen01g035490 Solanum pennellii HOM05D001778 ORTHO05D006754 1.7e-27 127.9 362 35.4
Ca_21617_v3 Cicer arietinum L. HOM05D001778 ORTHO05D006754 2.3e-27 127.5 376 32.7
TPR.G15772 Trifolium pratense HOM05D001778 ORTHO05D006754 3.0e-27 127.1 387 31.5
Phvul.003G174300 Phaseolus vulgaris HOM05D001778 ORTHO05D006754 4.3e-26 123.2 384 33.1
Dinv42919 Davidia involucrata HOM05D001778 ORTHO05D006754 2.1e-25 120.9 331 34.4
Dinv43181 Davidia involucrata HOM05D001778 ORTHO05D006754 2.1e-25 120.9 331 34.4
Peaxi162Scf01845g00008 Petunia axillaris HOM05D001778 ORTHO05D006754 6.2e-25 119.4 199 41.7
vmacro21885 Vaccinium macrocarpon HOM05D001778 ORTHO05D006754 1.2e-23 115.2 272 35.3
Cpa.g.sc46.83 Carica papaya HOM05D001778 ORTHO05D006754 2.0e-23 114.4 374 31.6
MSTRG.26321 Avicennia marina HOM05D001778 ORTHO05D006754 2.2e-22 110.9 336 32.1
Eucgr.C04089 Eucalyptus grandis HOM05D001778 ORTHO05D006754 6.4e-22 109.4 359 31.2
Hund09320 Selenicereus undatus HOM05D001778 ORTHO05D006754 6.4e-22 109.4 402 29.1
CSS0010233 Camellia sinensis var. sinensis HOM05D001778 ORTHO05D006754 3.5e-20 103.6 374 29.1
ClCG06G011980 Citrullus lanatus HOM05D001778 ORTHO05D006754 6.0e-20 102.8 383 29.8
Potri.002G140500 Populus trichocarpa HOM05D001778 ORTHO05D006754 7.8e-20 102.4 371 27.8
EL10Ac8g18825 Beta vulgaris HOM05D001778 ORTHO05D006754 1.7e-19 101.3 366 27.3
Sed0006824 Sechium edule HOM05D001778 ORTHO05D006754 5.1e-19 99.8 388 28.6
Rhsim01G0143100 Rhododendron simsii HOM05D001778 ORTHO05D006754 1.9e-18 97.8 362 30.9
vmacro21077 Vaccinium macrocarpon HOM05D001778 ORTHO05D006754 3.3e-18 97.1 355 29.3
Potri.014G053500 Populus trichocarpa HOM05D001778 ORTHO05D006754 7.3e-18 95.9 152 42.8
QL04p026302 Quercus lobata HOM05D001778 ORTHO05D006754 7.3e-18 95.9 376 29.8
Oeu024394.1 Olea europaea HOM05D001778 ORTHO05D006754 8.1e-17 92.4 158 39.9
Sc14g0000070 Simmondsia chinensis HOM05D001778 ORTHO05D006754 8.1e-17 92.4 358 30.2
Manes.05G058100 Manihot esculenta HOM05D001778 ORTHO05D006754 1.1e-16 92.0 359 30.1
Ah.14g078670 Amaranthus hybridus HOM05D001778 ORTHO05D006754 2.4e-16 90.9 387 27.9
Sabra02G0109700 Salix brachista HOM05D000894 ORTHO05D001833 1.2e-15 88.6 235 32.8
CSS0010785 Camellia sinensis var. sinensis HOM05D001778 ORTHO05D006754 2.6e-15 87.4 344 27.9
AUR62011263 Chenopodium quinoa HOM05D001778 ORTHO05D006754 7.6e-15 85.9 336 28.6
AUR62041443 Chenopodium quinoa HOM05D001778 ORTHO05D006754 1.3e-14 85.1 336 28.3
Oeu018162.1 Olea europaea HOM05D001778 ORTHO05D006754 1.7e-14 84.7 357 29.4
Sabra14G0040000 Salix brachista HOM05D005587 ORTHO05D007287 2.9e-14 84.0 344 28.8
Sc08g0005720 Simmondsia chinensis HOM05D001778 ORTHO05D006754 1.9e-13 81.3 169 33.7
Dinv42918 Davidia involucrata HOM05D001778 ORTHO05D006754 2.4e-13 80.9 59 61.0
Dinv43182 Davidia involucrata HOM05D001778 ORTHO05D006754 2.4e-13 80.9 59 61.0
Cc02_g25570 Coffea canephora HOM05D001778 ORTHO05D006754 3.2e-13 80.5 352 28.7
ECA236G1299 Erigeron canadensis HOM05D001778 ORTHO05D006754 2.1e-12 77.8 349 30.4
Sed0019605 Sechium edule HOM05D001778 ORTHO05D006754 3.5e-12 77.0 289 27.3
SEGI_35279 Sequoiadendron giganteum HOM05D001778 ORTHO05D006754 3.0e-11 73.9 207 30.0
PGR102G3058 Punica granatum HOM05D001778 ORTHO05D006754 5.1e-11 73.2 394 27.4
Migut.N01718 Erythranthe guttata HOM05D001778 ORTHO05D006754 5.6e-10 69.7 209 32.1
Actinidia12627 Actinidia chinensis HOM05D001778 ORTHO05D006754 3.8e-06 57.0 61 49.2


User provided reference genes

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