Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_020883 Daucus carota HOM05D005260 ORTHO05D006390 3.5e-152 541.6 272 100.0
Rhsim01G0036000 Rhododendron simsii HOM05D005260 ORTHO05D006390 2.5e-102 375.9 292 68.5
CSS0012073 Camellia sinensis var. sinensis HOM05D005260 ORTHO05D006390 4.3e-102 375.2 288 70.8
Rhsim01G0045600 Rhododendron simsii HOM05D005260 ORTHO05D006390 5.7e-102 374.8 292 68.8
Hma1.2p1_0028F.1_g017400 Hydrangea macrophylla HOM05D005260 ORTHO05D006390 4.8e-101 371.7 284 69.7
Rhsim01G0035700 Rhododendron simsii HOM05D005260 ORTHO05D006390 1.8e-100 369.8 286 69.2
TAR383G0874 Trochodendron aralioides HOM05D005260 ORTHO05D006390 2.5e-97 359.4 284 68.3
Glyma.02G202400 Glycine max HOM05D005260 ORTHO05D006390 5.5e-97 358.2 274 68.6
Lsat_1_v5_gn_6_38260 Lactuca sativa HOM05D005260 ORTHO05D006390 9.4e-97 357.5 277 69.3
QL02p092738 Quercus lobata HOM05D005260 ORTHO05D006390 2.1e-96 356.3 283 68.6
RhsimUnG0040000 Rhododendron simsii HOM05D005260 ORTHO05D006390 6.1e-96 354.8 278 67.6
Phvul.003G157300 Phaseolus vulgaris HOM05D005260 ORTHO05D006390 6.7e-95 351.3 272 66.5
Glyma.17G075400 Glycine max HOM05D005260 ORTHO05D006390 1.1e-94 350.5 273 68.1
FAN23G1120 Fragaria x ananassa HOM05D005260 ORTHO05D006390 3.3e-94 349.0 279 69.2
FAN19G1826 Fragaria x ananassa HOM05D005260 ORTHO05D006390 4.4e-94 348.6 279 68.5
Peaxi162Scf00347g00088 Petunia axillaris HOM05D005260 ORTHO05D006390 7.4e-94 347.8 285 67.0
Nitab4.5_0001201g0060 Nicotiana tabacum HOM05D005260 ORTHO05D006390 1.3e-93 347.1 285 68.1
Nitab4.5_0008157g0020 Nicotiana tabacum HOM05D005260 ORTHO05D006390 2.2e-93 346.3 285 67.4
Ca_21113_v3 Cicer arietinum L. HOM05D005260 ORTHO05D006390 4.8e-93 345.1 274 68.2
Psat4g008640 Pisum sativum HOM05D005260 ORTHO05D006390 6.3e-93 344.7 276 67.4
RcHm_v2.0_Chr2g0085941 Rosa chinensis HOM05D005260 ORTHO05D006390 8.2e-93 344.4 284 66.9
FAN26G1108 Fragaria x ananassa HOM05D005260 ORTHO05D006390 1.4e-92 343.6 275 68.4
Prupe.7G260500 Prunus persica HOM05D005260 ORTHO05D006390 1.8e-92 343.2 285 66.7
Cc06_g15200 Coffea canephora HOM05D005260 ORTHO05D006390 9.1e-92 340.9 285 65.6
Lalb_Chr13g0300941 Lupinus albus HOM05D005260 ORTHO05D006390 9.1e-92 340.9 280 68.2
Potri.018G109800 Populus trichocarpa HOM05D005260 ORTHO05D006390 9.1e-92 340.9 282 64.5
MD15G1155100 Malus domestica HOM05D005260 ORTHO05D006390 1.2e-91 340.5 284 64.8
Haze_19232 Corylus avellana HOM05D005260 ORTHO05D006390 4.5e-91 338.6 277 65.7
TAR625G1225 Trochodendron aralioides HOM05D005260 ORTHO05D006390 4.5e-91 338.6 279 66.7
FAN28G1391 Fragaria x ananassa HOM05D005260 ORTHO05D006390 5.9e-91 338.2 275 67.3
ECA233G0390 Erigeron canadensis HOM05D005260 ORTHO05D006390 2.2e-90 336.3 291 65.6
TPR.G9269 Trifolium pratense HOM05D005260 ORTHO05D006390 2.2e-90 336.3 277 66.1
Eucgr.C02595 Eucalyptus grandis HOM05D005260 ORTHO05D006390 5.0e-90 335.1 279 64.5
Sabra18G0092700 Salix brachista HOM05D005260 ORTHO05D006390 5.0e-90 335.1 286 63.3
Solyc07g005340.2 Solanum lycopersicum HOM05D005260 ORTHO05D006390 5.0e-90 335.1 287 65.9
Cfa020845 Carpinus fangiana HOM05D005260 ORTHO05D006390 1.1e-89 334.0 277 65.0
Sopen07g001450 Solanum pennellii HOM05D005260 ORTHO05D006390 1.1e-89 334.0 287 65.5
CAN.G1116.9 Capsicum annuum HOM05D005260 ORTHO05D006390 3.2e-89 332.4 285 64.9
Lj7P455T24 Lonicera japonica HOM05D005260 ORTHO05D006390 4.2e-89 332.0 285 63.9
Sc18g0000130 Simmondsia chinensis HOM05D005260 ORTHO05D006390 5.5e-89 331.6 285 63.5
Oeu051690.1 Olea europaea HOM05D005260 ORTHO05D006390 7.2e-89 331.3 277 66.4
Ciclev10008691m.g Citrus clementina HOM05D005260 ORTHO05D006390 9.4e-89 330.9 280 62.1
FvH4_1g01150 Fragaria vesca HOM05D005260 ORTHO05D006390 9.4e-89 330.9 282 66.0
PGSC0003DMG400003180 Solanum tuberosum HOM05D005260 ORTHO05D006390 4.7e-88 328.6 287 64.8
Manes.14G111500 Manihot esculenta HOM05D005260 ORTHO05D006390 6.1e-88 328.2 281 61.9
Potri.006G186900 Populus trichocarpa HOM05D005260 ORTHO05D006390 1.8e-87 326.6 283 63.6
CiPaw.15G174600 Carya illinoinensis HOM05D005260 ORTHO05D006390 2.3e-87 326.2 285 63.5
Medtr4g131190 Medicago truncatula HOM05D005260 ORTHO05D006390 1.1e-86 323.9 267 65.5
MBI14_g37102_MAGBIO Magnolia biondii HOM05D005260 ORTHO05D006390 2.0e-86 323.2 283 61.5
Lj4g0015138 Lotus japonicus HOM05D005260 ORTHO05D006390 2.6e-86 322.8 273 64.8
Actinidia04287 Actinidia chinensis HOM05D005260 ORTHO05D006390 5.7e-86 321.6 276 62.7
Oeu050475.1 Olea europaea HOM05D005260 ORTHO05D006390 9.7e-86 320.9 277 65.0
TWI34G1822 Tripterygium wilfordii HOM05D005260 ORTHO05D006390 9.7e-86 320.9 285 62.8
CsaV3_1G028770 Cucumis sativus L. HOM05D005260 ORTHO05D006390 1.3e-85 320.5 286 62.2
SGA_v2.0_scaffold265G46122 Striga asiatica HOM05D005260 ORTHO05D006390 1.7e-85 320.1 276 63.4
MELO3C010238.2 Cucumis melo HOM05D005260 ORTHO05D006390 2.2e-85 319.7 287 63.4
Duzib168G1964 Durio zibethinus HOM05D005260 ORTHO05D006390 2.2e-85 319.7 276 63.0
HanXRQChr13g0397631 Helianthus annuus HOM05D005260 ORTHO05D006390 2.2e-85 319.7 287 62.4
ClCG06G015480 Citrullus lanatus HOM05D005260 ORTHO05D006390 2.8e-85 319.3 283 62.5
VMungo1215G1942 Vigna mungo HOM05D005260 ORTHO05D006390 1.8e-84 316.6 272 61.0
Sabra06G0142800 Salix brachista HOM05D005260 ORTHO05D006390 7.0e-84 314.7 273 61.9
PGR102G1636 Punica granatum HOM05D005260 ORTHO05D006390 1.2e-83 313.9 275 61.5
Duzib150G0891 Durio zibethinus HOM05D005260 ORTHO05D006390 2.7e-83 312.8 277 62.5
Gohir.A13G184700 Gossypium hirsutum HOM05D005260 ORTHO05D006390 2.7e-83 312.8 276 62.0
Gohir.D13G191100 Gossypium hirsutum HOM05D005260 ORTHO05D006390 3.5e-83 312.4 276 62.0
Gorai.013G217000 Gossypium raimondii HOM05D005260 ORTHO05D006390 3.5e-83 312.4 276 62.0
A02p08050 Brassica napus HOM05D005260 ORTHO05D006390 1.3e-82 310.5 276 61.6
BcaC04g19916 Brassica carinata HOM05D005260 ORTHO05D006390 1.7e-82 310.1 279 60.2
C09p49880 Brassica napus HOM05D005260 ORTHO05D006390 1.7e-82 310.1 279 60.2
BolC9t57839H Brassica oleracea HOM05D005260 ORTHO05D006390 1.7e-82 310.1 279 60.2
Thecc.09G033300 Theobroma cacao HOM05D005260 ORTHO05D006390 1.7e-82 310.1 276 60.9
Atru.chr6.1391 Acer truncatum HOM05D005260 ORTHO05D006390 2.2e-82 309.7 280 60.0
A10p16150 Brassica napus HOM05D005260 ORTHO05D006390 2.2e-82 309.7 279 60.2
BraA10t43614Z Brassica rapa HOM05D005260 ORTHO05D006390 2.2e-82 309.7 281 60.5
SHI04751 Sapria himalayana HOM05D005260 ORTHO05D006390 2.2e-82 309.7 281 58.4
Sabra06G0141800 Salix brachista HOM05D005260 ORTHO05D006390 2.9e-82 309.3 274 61.3
Atru.chr7.58 Acer truncatum HOM05D005260 ORTHO05D006390 3.8e-82 308.9 280 60.0
Thhalv10013961m.g Eutrema salsugineum HOM05D005260 ORTHO05D006390 3.8e-82 308.9 281 60.1
AL8G34120 Arabidopsis lyrata HOM05D005260 ORTHO05D006390 5.0e-82 308.5 279 59.5
CARHR271830 Cardamine hirsuta HOM05D005260 ORTHO05D006390 6.5e-82 308.1 279 59.9
BcaB05g22395 Brassica carinata HOM05D005260 ORTHO05D006390 8.5e-82 307.8 279 61.3
BolC2t07483H Brassica oleracea HOM05D005260 ORTHO05D006390 8.5e-82 307.8 276 61.2
C02p13690 Brassica napus HOM05D005260 ORTHO05D006390 2.5e-81 306.2 276 61.2
Sp6g19700 Schrenkiella parvula HOM05D005260 ORTHO05D006390 3.2e-81 305.8 281 59.1
Sed0012515 Sechium edule HOM05D005260 ORTHO05D006390 3.2e-81 305.8 286 60.1
AT5G58020 Arabidopsis thaliana HOM05D005260 ORTHO05D006390 4.2e-81 305.4 281 60.1
Cpa.g.sc46.130 Carica papaya HOM05D005260 ORTHO05D006390 4.2e-81 305.4 282 61.3
PSO170G6608 Papaver somniferum HOM05D005260 ORTHO05D006390 4.2e-81 305.4 295 60.7
BraA02t05877Z Brassica rapa HOM05D005260 ORTHO05D006390 9.4e-81 304.3 276 60.9
Aa31LG3G13860 Aethionema arabicum HOM05D005260 ORTHO05D006390 1.6e-80 303.5 278 60.1
PSO017G5909 Papaver somniferum HOM05D005260 ORTHO05D006390 1.6e-80 303.5 295 60.7
MSTRG.6120 Avicennia marina HOM05D005260 ORTHO05D006390 2.1e-80 303.1 276 59.1
Carub.0008s1857 Capsella rubella HOM05D005260 ORTHO05D006390 8.0e-80 301.2 281 60.9
GSVIVG01023592001 Vitis vinifera HOM05D005260 ORTHO05D006390 8.0e-80 301.2 272 63.6
ATR0739G050 Amborella trichopoda HOM05D005260 ORTHO05D006390 3.4e-78 295.8 291 59.5
Migut.J01331 Erythranthe guttata HOM05D005260 ORTHO05D006390 3.4e-78 295.8 276 58.3
THA.LOC104817828 Tarenaya hassleriana HOM05D005260 ORTHO05D006390 4.4e-78 295.4 278 59.7
SalBow1G8640 Salvia bowleyana HOM05D005260 ORTHO05D006390 6.3e-77 291.6 275 57.8
Gorai.006G273400 Gossypium raimondii HOM05D005260 ORTHO05D006390 1.8e-76 290.0 276 59.8
Os06g0183900 Oryza sativa ssp. japonica HOM05D005260 ORTHO05D006390 1.2e-75 287.3 278 57.2
THA.LOC104817826 Tarenaya hassleriana HOM05D005260 ORTHO05D006390 2.0e-75 286.6 276 57.2
Ah.11g045050 Amaranthus hybridus HOM05D005260 ORTHO05D006390 1.7e-74 283.5 280 57.5
Aqoxy3G00834 Aquilegia oxysepala HOM05D005260 ORTHO05D006390 1.5e-73 280.4 278 59.7
Gohir.D09G249000 Gossypium hirsutum HOM05D005260 ORTHO05D006390 2.5e-73 279.6 285 57.5
CiPaw.16G114800 Carya illinoinensis HOM05D005260 ORTHO05D006390 1.8e-71 273.5 278 56.8
EL10Ac8g18850 Beta vulgaris HOM05D005260 ORTHO05D006390 4.4e-70 268.9 296 53.0
Pp3c14_10930 Physcomitrium patens HOM05D005260 ORTHO05D006390 9.8e-70 267.7 282 53.9
COL.COLO4_18779 Corchorus olitorius HOM05D005260 ORTHO05D006390 6.3e-69 265.0 276 56.9
SEGI_13576 Sequoiadendron giganteum HOM05D005260 ORTHO05D006390 1.1e-68 264.2 279 54.5
AagrBONN_evm.TU.Sc2ySwM_228.4055 Anthoceros agrestis HOM05D005260 ORTHO05D006390 8.6e-66 254.6 281 52.0
SGA_v2.0_scaffold45G17044 Striga asiatica HOM05D005260 ORTHO05D006390 2.5e-65 253.1 265 55.1
Actinidia38337 Actinidia chinensis HOM05D005260 ORTHO05D006390 1.2e-64 250.8 169 74.0
Mapoly0043s0023 Marchantia polymorpha HOM05D005260 ORTHO05D006390 4.7e-64 248.8 297 49.5
SMO307G0072 Selaginella moellendorffii HOM05D005260 ORTHO05D006390 1.5e-62 243.8 277 51.6
AUR62031434 Chenopodium quinoa HOM05D005260 ORTHO05D006390 2.5e-57 226.5 211 55.9
Dinv42879 Davidia involucrata HOM05D005260 ORTHO05D006390 4.0e-55 219.2 249 55.0
Dinv43221 Davidia involucrata HOM05D005260 ORTHO05D006390 4.0e-55 219.2 249 55.0
CBR_g44540 Chara braunii HOM05D005260 ORTHO05D006390 2.0e-54 216.9 329 41.0
AUR62021106 Chenopodium quinoa HOM05D005260 ORTHO05D006390 8.3e-53 211.5 197 55.3
HPP92_018747 Vanilla planifolia HOM05D005260 ORTHO05D006390 2.7e-51 206.5 204 58.8
Gohir.D07G030400 Gossypium hirsutum HOM05D005260 ORTHO05D006390 3.0e-50 203.0 272 47.4
Gorai.001G031600 Gossypium raimondii HOM05D005260 ORTHO05D006390 6.6e-50 201.8 272 47.1
Lalb_Chr12g0198621 Lupinus albus HOM05D005260 ORTHO05D006390 6.6e-50 201.8 199 60.3
unitig_0.g2819 Utricularia gibba HOM05D005260 ORTHO05D006390 1.4e-44 184.1 220 51.4
AagrBONN_evm.TU.Sc2ySwM_344.4069 Anthoceros agrestis HOM05D005260 ORTHO05D006390 1.2e-32 144.4 180 51.7
TAR625G0635 Trochodendron aralioides HOM05D005260 ORTHO05D006390 3.4e-30 136.3 142 59.9
HanXRQChr09g0262911 Helianthus annuus HOM05D005260 ORTHO05D006390 2.4e-28 130.2 89 68.5
Atru.chr13.1961 Acer truncatum HOM05D005260 ORTHO05D006390 6.0e-27 125.6 167 50.3
CDE02G0414 Ceratophyllum demersum HOM05D005260 ORTHO05D006390 7.3e-25 118.6 153 50.3
Cre03.g150650 Chlamydomonas reinhardtii HOM05D005260 ORTHO05D006390 8.1e-24 115.2 292 30.5
PRCOL_00003864 Prasinoderma coloniale HOM05D005260 ORTHO05D006390 9.9e-22 108.2 269 32.3
BolC3t13905H Brassica oleracea HOM05D005260 ORTHO05D006390 4.6e-11 72.8 51 72.5
MCO05G557 Micromonas commoda HOM05D005260 ORTHO05D006390 3.0e-10 70.1 224 25.0
Zm00001eb158280 Zea mays HOM05D005260 ORTHO05D006390 1.9e-09 67.4 55 56.4
CBR_g37538 Chara braunii HOM05D005260 ORTHO05D006390 3.7e-08 63.2 247 23.1
unitig_747.g21900 Utricularia gibba HOM05D005260 ORTHO05D006390 6.2e-08 62.4 81 50.6
MELO3C004727.2 Cucumis melo HOM05D005260 ORTHO05D006390 6.9e-07 58.9 31 80.6
HPP92_018748 Vanilla planifolia HOM05D005260 ORTHO05D006390 6.9e-07 58.9 34 73.5
Cre17.g715950 Chlamydomonas reinhardtii HOM05D005260 ORTHO05D006390 2.6e-06 57.0 165 27.3


User provided reference genes

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