Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_020880 Daucus carota HOM05D003121 ORTHO05D003535 1.7e-155 552.7 295 100.0
DCAR_022799 Daucus carota HOM05D003121 ORTHO05D003535 2.0e-113 412.9 234 94.9
Dinv41919 Davidia involucrata HOM05D003121 ORTHO05D003535 1.4e-69 267.3 236 66.1
Hma1.2p1_0032F.1_g019220 Hydrangea macrophylla HOM05D003121 ORTHO05D003535 4.5e-68 262.3 237 64.1
Nitab4.5_0000563g0090 Nicotiana tabacum HOM05D003121 ORTHO05D003535 2.2e-67 260.0 242 63.2
Nitab4.5_0002341g0030 Nicotiana tabacum HOM05D003121 ORTHO05D003535 4.9e-67 258.8 242 62.8
TAR376G0768 Trochodendron aralioides HOM05D003121 ORTHO05D003535 3.2e-66 256.1 240 63.3
CAN.G756.31 Capsicum annuum HOM05D003121 ORTHO05D003535 9.3e-66 254.6 238 62.2
Eucgr.G01791 Eucalyptus grandis HOM05D003121 ORTHO05D003535 2.7e-65 253.1 237 62.9
Ciclev10030221m.g Citrus clementina HOM05D003121 ORTHO05D003535 3.5e-65 252.7 232 62.5
PGSC0003DMG401001724 Solanum tuberosum HOM05D003121 ORTHO05D003535 7.9e-65 251.5 240 62.1
Migut.N01332 Erythranthe guttata HOM05D003121 ORTHO05D003535 1.3e-64 250.8 273 56.4
ClCG02G003910 Citrullus lanatus HOM05D003121 ORTHO05D003535 2.3e-64 250.0 240 59.6
Duzib052G0361 Durio zibethinus HOM05D003121 ORTHO05D003535 3.9e-64 249.2 232 60.8
CsaV3_7G001220 Cucumis sativus L. HOM05D003121 ORTHO05D003535 1.1e-63 247.7 240 59.6
Sed0021457 Sechium edule HOM05D003121 ORTHO05D003535 1.1e-63 247.7 240 59.6
Sopen01g035570 Solanum pennellii HOM05D003121 ORTHO05D003535 1.5e-63 247.3 240 60.8
MSTRG.27630 Avicennia marina HOM05D003121 ORTHO05D003535 2.5e-63 246.5 237 59.9
TAR625G0403 Trochodendron aralioides HOM05D003121 ORTHO05D003535 4.3e-63 245.7 239 61.9
Rhsim01G0025300 Rhododendron simsii HOM05D003121 ORTHO05D003535 5.6e-63 245.4 235 60.9
Solyc01g088730.3 Solanum lycopersicum HOM05D003121 ORTHO05D003535 1.6e-62 243.8 238 60.1
Ca_03297_v3 Cicer arietinum L. HOM05D003121 ORTHO05D003535 2.1e-62 243.4 232 59.5
Cc09_g10310 Coffea canephora HOM05D003121 ORTHO05D003535 2.1e-62 243.4 240 59.6
PGR042G3155 Punica granatum HOM05D003121 ORTHO05D003535 4.8e-62 242.3 236 61.0
Prupe.8G168900 Prunus persica HOM05D003121 ORTHO05D003535 1.1e-61 241.1 240 59.2
Peaxi162Scf00793g00345 Petunia axillaris HOM05D003121 ORTHO05D003535 1.8e-61 240.4 239 60.7
QL11p052350 Quercus lobata HOM05D003121 ORTHO05D003535 1.8e-61 240.4 243 58.0
GSVIVG01037045001 Vitis vinifera HOM05D003121 ORTHO05D003535 3.1e-61 239.6 238 60.5
HanXRQChr10g0298091 Helianthus annuus HOM05D003121 ORTHO05D003535 9.0e-61 238.0 238 60.1
Hma1.2p1_0163F.1_g072700 Hydrangea macrophylla HOM05D003121 ORTHO05D003535 2.0e-60 236.9 239 59.8
SGA_v2.0_scaffold195G40810 Striga asiatica HOM05D003121 ORTHO05D003535 3.4e-60 236.1 237 59.1
Gorai.002G200100 Gossypium raimondii HOM05D003121 ORTHO05D003535 9.9e-60 234.6 236 59.3
Gohir.D01G161400 Gossypium hirsutum HOM05D003121 ORTHO05D003535 1.3e-59 234.2 236 59.3
CSS0021302 Camellia sinensis var. sinensis HOM05D003121 ORTHO05D003535 2.9e-59 233.0 237 59.5
MELO3C013333.2 Cucumis melo HOM05D003121 ORTHO05D003535 2.9e-59 233.0 240 57.1
Actinidia39167 Actinidia chinensis HOM05D003121 ORTHO05D003535 6.4e-59 231.9 237 57.0
Gohir.A01G170400 Gossypium hirsutum HOM05D003121 ORTHO05D003535 1.1e-58 231.1 236 58.5
RcHm_v2.0_Chr6g0278841 Rosa chinensis HOM05D003121 ORTHO05D003535 1.1e-58 231.1 240 55.4
CARHR189980 Cardamine hirsuta HOM05D003121 ORTHO05D003535 1.9e-58 230.3 238 58.4
CiPaw.02G071300 Carya illinoinensis HOM05D003121 ORTHO05D003535 3.2e-58 229.6 240 57.9
Psat6g232680 Pisum sativum HOM05D003121 ORTHO05D003535 3.2e-58 229.6 237 57.8
Lsat_1_v5_gn_4_72000 Lactuca sativa HOM05D003121 ORTHO05D003535 4.2e-58 229.2 242 59.1
ECA234G0462 Erigeron canadensis HOM05D003121 ORTHO05D003535 7.1e-58 228.4 243 56.4
Haze_00809 Corylus avellana HOM05D003121 ORTHO05D003535 9.3e-58 228.0 243 58.0
THA.LOC104819658 Tarenaya hassleriana HOM05D003121 ORTHO05D003535 1.2e-57 227.6 233 60.1
Thecc.02G055800 Theobroma cacao HOM05D003121 ORTHO05D003535 1.2e-57 227.6 238 57.1
Nn5g27768 Nelumbo nucifera HOM05D003121 ORTHO05D003535 2.1e-57 226.9 241 57.7
Manes.15G059200 Manihot esculenta HOM05D003121 ORTHO05D003535 2.7e-57 226.5 258 52.3
FvH4_2g15640 Fragaria vesca HOM05D003121 ORTHO05D003535 6.0e-57 225.3 242 53.7
FAN20G1288 Fragaria x ananassa HOM05D003121 ORTHO05D003535 7.9e-57 224.9 237 54.4
FAN24G0024 Fragaria x ananassa HOM05D003121 ORTHO05D003535 1.0e-56 224.6 237 54.4
CiPaw.01G132000 Carya illinoinensis HOM05D003121 ORTHO05D003535 1.8e-56 223.8 242 57.9
COL.COLO4_17374 Corchorus olitorius HOM05D003121 ORTHO05D003535 1.8e-56 223.8 241 56.0
Sed0012540 Sechium edule HOM05D003121 ORTHO05D003535 3.9e-56 222.6 240 53.3
Actinidia32029 Actinidia chinensis HOM05D003121 ORTHO05D003535 6.7e-56 221.9 231 56.3
TPR.G2486 Trifolium pratense HOM05D003121 ORTHO05D003535 8.7e-56 221.5 236 56.8
vmacro13056 Vaccinium macrocarpon HOM05D003121 ORTHO05D003535 8.7e-56 221.5 234 55.6
Sp2g23600 Schrenkiella parvula HOM05D003121 ORTHO05D003535 1.9e-55 220.3 240 57.1
Carub.0006s2137 Capsella rubella HOM05D003121 ORTHO05D003535 3.3e-55 219.5 238 56.7
arahy.Tifrunner.gnm1.ann1.LP37DI Arachis hypogaea HOM05D003121 ORTHO05D003535 4.3e-55 219.2 237 56.5
AL6G34890 Arabidopsis lyrata HOM05D003121 ORTHO05D003535 7.4e-55 218.4 238 56.3
Thhalv10004704m.g Eutrema salsugineum HOM05D003121 ORTHO05D003535 9.6e-55 218.0 239 55.2
AT5G23590 Arabidopsis thaliana HOM05D003121 ORTHO05D003535 3.7e-54 216.1 237 56.1
Medtr1g112910 Medicago truncatula HOM05D003121 ORTHO05D003535 3.7e-54 216.1 235 56.2
VMungo0720G1452 Vigna mungo HOM05D003121 ORTHO05D003535 3.7e-54 216.1 234 55.1
Aa31LG10G14410 Aethionema arabicum HOM05D003121 ORTHO05D003535 1.1e-53 214.5 239 57.3
arahy.Tifrunner.gnm1.ann1.TJ1SRC Arachis hypogaea HOM05D003121 ORTHO05D003535 1.1e-53 214.5 233 56.2
EL10Ac9g21341 Beta vulgaris HOM05D003121 ORTHO05D003535 1.4e-53 214.2 234 56.8
MD05G1124900 Malus domestica HOM05D003121 ORTHO05D003535 2.4e-53 213.4 237 53.2
Glyma.20G106400 Glycine max HOM05D003121 ORTHO05D003535 3.1e-53 213.0 232 55.2
Hund00013 Selenicereus undatus HOM05D003121 ORTHO05D003535 9.0e-53 211.5 239 54.8
AUR62010012 Chenopodium quinoa HOM05D003121 ORTHO05D003535 2.0e-52 210.3 233 56.7
Lj5g0004060 Lotus japonicus HOM05D003121 ORTHO05D003535 2.0e-52 210.3 231 54.5
EL10Ac6g13967 Beta vulgaris HOM05D003121 ORTHO05D003535 3.4e-52 209.5 234 55.6
PSO541G2003 Papaver somniferum HOM05D003121 ORTHO05D003535 3.4e-52 209.5 282 51.4
BraA06t26383Z Brassica rapa HOM05D003121 ORTHO05D003535 1.7e-51 207.2 241 53.9
C07p43950 Brassica napus HOM05D003121 ORTHO05D003535 4.9e-51 205.7 247 53.0
AUR62013002 Chenopodium quinoa HOM05D003121 ORTHO05D003535 4.9e-51 205.7 233 56.2
PSO675G0341 Papaver somniferum HOM05D003121 ORTHO05D003535 4.9e-51 205.7 286 50.7
TWI60G0855 Tripterygium wilfordii HOM05D003121 ORTHO05D003535 8.4e-51 204.9 234 54.3
A06p34540 Brassica napus HOM05D000059 ORTHO05D003535 1.1e-50 204.5 242 54.1
Lalb_Chr06g0163731 Lupinus albus HOM05D003121 ORTHO05D003535 1.4e-50 204.1 236 54.2
Dinv40527 Davidia involucrata HOM05D003121 ORTHO05D003535 1.9e-50 203.8 195 61.5
BolC7t44923H Brassica oleracea HOM05D003121 ORTHO05D003535 4.2e-50 202.6 244 52.9
AUR62015153 Chenopodium quinoa HOM05D003121 ORTHO05D003535 7.1e-50 201.8 233 54.9
Eucgr.L03152 Eucalyptus grandis HOM05D003121 ORTHO05D003535 1.6e-49 200.7 203 61.1
Ah.01g023230 Amaranthus hybridus HOM05D003121 ORTHO05D003535 2.1e-49 200.3 272 48.2
Lj5P177T42 Lonicera japonica HOM05D003121 ORTHO05D003535 1.5e-47 194.1 176 67.6
Phvul.007G017900 Phaseolus vulgaris HOM05D003121 ORTHO05D003535 3.3e-47 193.0 234 51.7
unitig_746.g26872 Utricularia gibba HOM05D003121 ORTHO05D003535 4.3e-47 192.6 240 49.6
Glyma.10G283300 Glycine max HOM05D003121 ORTHO05D003535 8.2e-46 188.3 238 49.6
CDE02G2638 Ceratophyllum demersum HOM05D003121 ORTHO05D003535 1.1e-45 188.0 234 51.3
Lsat_1_v5_gn_4_71980 Lactuca sativa HOM05D003121 ORTHO05D003535 3.1e-45 186.4 235 54.0
Sabra09G0107000 Salix brachista HOM05D003121 ORTHO05D003535 4.5e-44 182.6 234 48.3
ATR0661G016 Amborella trichopoda HOM05D003121 ORTHO05D003535 1.3e-43 181.0 247 46.6
SEGI_06864 Sequoiadendron giganteum HOM05D003121 ORTHO05D003535 1.9e-42 177.2 244 45.5
Potri.009G138100 Populus trichocarpa HOM05D003121 ORTHO05D003535 4.2e-42 176.0 234 47.0
Sc14g0002330 Simmondsia chinensis HOM05D003121 ORTHO05D003535 5.5e-42 175.6 176 58.0
MBI15_g18375_MAGBIO Magnolia biondii HOM05D000140 ORTHO05D000087 3.6e-41 172.9 236 46.2
MBI07_g07805_MAGBIO Magnolia biondii HOM05D003121 ORTHO05D003535 3.7e-38 162.9 193 52.8
COL.COLO4_32987 Corchorus olitorius HOM05D003121 ORTHO05D003535 6.3e-38 162.2 218 48.2
BcaNung05203 Brassica carinata HOM05D003121 ORTHO05D003535 4.1e-37 159.5 247 46.2
CDE09G1210 Ceratophyllum demersum HOM05D003121 ORTHO05D003535 4.1e-37 159.5 190 53.7
SHI04584 Sapria himalayana HOM05D003121 ORTHO05D003535 4.5e-36 156.0 279 39.1
Mapoly0015s0100 Marchantia polymorpha HOM05D003121 ORTHO05D003535 3.8e-35 152.9 253 41.1
HPP92_007329 Vanilla planifolia HOM05D003121 ORTHO05D003535 1.9e-34 150.6 297 38.0
Actinidia21476 Actinidia chinensis HOM05D003121 ORTHO05D003535 2.5e-34 150.2 193 50.8
CSS0049142 Camellia sinensis var. sinensis HOM05D003121 ORTHO05D003535 8.8e-32 141.7 227 42.3
CSS0045143 Camellia sinensis var. sinensis HOM05D003121 ORTHO05D003535 7.4e-31 138.7 198 48.0
Oeu028963.1 Olea europaea HOM05D003121 ORTHO05D003535 1.3e-30 137.9 156 53.2
Aqoxy6G01979 Aquilegia oxysepala HOM05D003121 ORTHO05D003535 2.4e-29 133.7 199 49.2
ECA236G3931 Erigeron canadensis HOM05D003121 ORTHO05D003535 1.5e-28 131.0 241 40.7
Pp3c8_9650 Physcomitrium patens HOM05D003121 ORTHO05D003535 3.5e-28 129.8 237 38.4
Cpa.g.sc14.232 Carica papaya HOM05D003121 ORTHO05D003535 2.7e-25 120.2 232 38.8
PGSC0003DMG401018151 Solanum tuberosum HOM05D003121 ORTHO05D003535 8.0e-25 118.6 196 46.4
CSS0005739 Camellia sinensis var. sinensis HOM05D003121 ORTHO05D003535 1.8e-24 117.5 132 54.5
Peaxi162Scf00444g00017 Petunia axillaris HOM05D003121 ORTHO05D003535 2.6e-23 113.6 254 38.6
SMO364G0026 Selaginella moellendorffii HOM05D003121 ORTHO05D003535 5.3e-21 105.9 256 33.6
AagrBONN_evm.TU.Sc2ySwM_362.2486 Anthoceros agrestis HOM05D003121 ORTHO05D003535 7.0e-21 105.5 217 37.3
DCAR_029977 Daucus carota HOM05D003121 ORTHO05D003535 7.0e-21 105.5 227 37.9
Zm00001eb002940 Zea mays HOM05D003121 ORTHO05D003535 2.2e-19 100.5 174 42.0
BcaB07g29983 Brassica carinata HOM05D000059 ORTHO05D000128 6.5e-19 99.0 231 34.6
Os03g0136800 Oryza sativa ssp. japonica HOM05D003121 ORTHO05D003535 8.5e-19 98.6 235 35.7
Solyc12g056890.1 Solanum lycopersicum HOM05D003121 ORTHO05D003535 3.2e-18 96.7 191 42.9
SGA_v2.0_scaffold207G41938 Striga asiatica HOM05D003121 ORTHO05D003535 4.7e-17 92.8 235 34.0
Atru.chr2.1615 Acer truncatum HOM05D003121 ORTHO05D003535 4.0e-16 89.7 205 36.6
CBR_g49670 Chara braunii HOM05D002303 ORTHO05D007639 4.0e-16 89.7 210 33.8
Sopen04g007110 Solanum pennellii HOM05D003121 ORTHO05D003535 2.0e-15 87.4 192 35.4
PGSC0003DMG400015012 Solanum tuberosum HOM05D003121 ORTHO05D003535 2.0e-15 87.4 191 36.1
Solyc04g015090.3 Solanum lycopersicum HOM05D003121 ORTHO05D003535 2.6e-15 87.0 192 37.0
PRCOL_00003164 Prasinoderma coloniale HOM05D003121 ORTHO05D003535 1.7e-14 84.3 259 31.7
CSS0039474 Camellia sinensis var. sinensis HOM05D003121 ORTHO05D003535 2.2e-14 84.0 244 34.0
PSO675G3506 Papaver somniferum HOM05D003121 ORTHO05D003535 2.2e-14 84.0 146 44.5
PGSC0003DMG400045980 Solanum tuberosum HOM05D003121 ORTHO05D003535 3.1e-13 80.1 137 44.5
PSO732G0110 Papaver somniferum HOM05D003121 ORTHO05D003535 2.0e-12 77.4 138 43.5
MCO05G385 Micromonas commoda HOM05D003121 ORTHO05D003535 7.7e-12 75.5 242 31.0
MD10G1127700 Malus domestica HOM05D003121 ORTHO05D003535 1.1e-10 71.6 69 55.1
ECA240G3367 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.5e-10 70.5 211 34.6
Actinidia08416 Actinidia chinensis HOM05D003121 ORTHO05D003535 2.7e-09 67.0 87 54.0
PSO339G5273 Papaver somniferum HOM05D003121 ORTHO05D003535 1.8e-08 64.3 178 33.7
Ah.14g082270 Amaranthus hybridus HOM05D003121 ORTHO05D003535 1.5e-07 61.2 75 50.7
Gorai.011G217000 Gossypium raimondii HOM05D001348 ORTHO05D017988 3.7e-06 56.6 67 47.8
Peaxi162Scf00102g01243 Petunia axillaris HOM05D000021 ORTHO05D000010 3.7e-06 56.6 48 68.8


User provided reference genes

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