Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_020866 Daucus carota HOM05D005959 ORTHO05D007263 4.5e-136 488.0 265 100.0
Cfa017467 Carpinus fangiana HOM05D005959 ORTHO05D007263 3.2e-118 428.7 265 86.4
Manes.08G000700 Manihot esculenta HOM05D005959 ORTHO05D007263 3.2e-118 428.7 265 86.4
Thecc.05G049500 Theobroma cacao HOM05D005959 ORTHO05D007263 7.2e-118 427.6 265 86.0
FAN09G4388 Fragaria x ananassa HOM05D005959 ORTHO05D007263 8.0e-117 424.1 265 84.2
Gohir.D04G117100 Gossypium hirsutum HOM05D005959 ORTHO05D007263 8.0e-117 424.1 265 85.3
Hma1.2p1_0111F.1_g053440 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 8.0e-117 424.1 265 83.0
Atru.chr8.2507 Acer truncatum HOM05D005959 ORTHO05D007263 1.0e-116 423.7 265 84.9
MSTRG.26742 Avicennia marina HOM05D005959 ORTHO05D007263 1.4e-116 423.3 265 84.9
Duzib128G1635 Durio zibethinus HOM05D005959 ORTHO05D007263 1.4e-116 423.3 265 85.3
Prupe.6G245600 Prunus persica HOM05D005959 ORTHO05D007263 1.4e-116 423.3 265 84.5
Duzib106G1538 Durio zibethinus HOM05D005959 ORTHO05D007263 1.8e-116 422.9 265 84.9
Gorai.009G422000 Gossypium raimondii HOM05D005959 ORTHO05D007263 2.3e-116 422.5 265 84.9
Cc06_g03270 Coffea canephora HOM05D005959 ORTHO05D007263 3.0e-116 422.2 265 84.2
RcHm_v2.0_Chr3g0468051 Rosa chinensis HOM05D005959 ORTHO05D007263 3.0e-116 422.2 265 83.8
FAN05G1034 Fragaria x ananassa HOM05D005959 ORTHO05D007263 3.9e-116 421.8 265 83.4
FAN02G2849 Fragaria x ananassa HOM05D005959 ORTHO05D007263 5.2e-116 421.4 265 83.4
Lj3A975G71 Lonicera japonica HOM05D005959 ORTHO05D007263 5.2e-116 421.4 265 85.3
Lsat_1_v5_gn_6_33160 Lactuca sativa HOM05D005959 ORTHO05D007263 1.1e-115 420.2 265 83.4
Haze_20691 Corylus avellana HOM05D005959 ORTHO05D007263 1.5e-115 419.9 278 82.4
FAN14G3394 Fragaria x ananassa HOM05D005959 ORTHO05D007263 1.5e-115 419.9 265 82.6
Oeu026074.1 Olea europaea HOM05D005959 ORTHO05D007263 1.5e-115 419.9 265 82.6
Ciclev10012473m.g Citrus clementina HOM05D005959 ORTHO05D007263 2.0e-115 419.5 265 83.8
Potri.016G082100 Populus trichocarpa HOM05D005959 ORTHO05D007263 2.0e-115 419.5 261 85.4
Migut.L01643 Erythranthe guttata HOM05D005959 ORTHO05D007263 2.6e-115 419.1 265 82.6
MD04G1110300 Malus domestica HOM05D005959 ORTHO05D007263 2.6e-115 419.1 265 83.8
QL07p045958 Quercus lobata HOM05D005959 ORTHO05D007263 2.6e-115 419.1 264 83.0
Peaxi162Scf00009g00079 Petunia axillaris HOM05D005959 ORTHO05D007263 3.3e-115 418.7 265 82.6
Duzib093G0581 Durio zibethinus HOM05D005959 ORTHO05D007263 4.4e-115 418.3 265 83.8
Rhsim05G0184400 Rhododendron simsii HOM05D005959 ORTHO05D007263 5.7e-115 417.9 265 83.8
Glyma.10G047100 Glycine max HOM05D005959 ORTHO05D007263 9.7e-115 417.2 258 86.0
Potri.006G215700 Populus trichocarpa HOM05D005959 ORTHO05D007263 9.7e-115 417.2 261 84.3
Nitab4.5_0000725g0200 Nicotiana tabacum HOM05D005959 ORTHO05D007263 1.3e-114 416.8 265 81.9
PGSC0003DMG400017610 Solanum tuberosum HOM05D005959 ORTHO05D007263 2.8e-114 415.6 265 82.6
unitig_578.g16043 Utricularia gibba HOM05D005959 ORTHO05D007263 2.8e-114 415.6 265 81.9
HanXRQChr13g0399331 Helianthus annuus HOM05D005959 ORTHO05D007263 6.3e-114 414.5 265 83.4
MD12G1131100 Malus domestica HOM05D005959 ORTHO05D007263 1.4e-113 413.3 265 81.5
FvH4_6g14820 Fragaria vesca HOM05D005959 ORTHO05D007263 1.8e-113 412.9 254 85.4
Solyc10g085950.2 Solanum lycopersicum HOM05D005959 ORTHO05D007263 1.8e-113 412.9 265 81.5
Glyma.03G175800 Glycine max HOM05D005959 ORTHO05D007263 5.3e-113 411.4 262 82.1
TWI74G1319 Tripterygium wilfordii HOM05D005959 ORTHO05D007263 5.3e-113 411.4 265 84.2
TAR623G1105 Trochodendron aralioides HOM05D005959 ORTHO05D007263 5.3e-113 411.4 265 83.8
Aqoxy2G00899 Aquilegia oxysepala HOM05D005959 ORTHO05D007263 1.6e-112 409.8 258 84.5
ATR0594G178 Amborella trichopoda HOM05D005959 ORTHO05D007263 2.0e-112 409.5 265 82.6
Eucgr.K03183 Eucalyptus grandis HOM05D005959 ORTHO05D007263 2.0e-112 409.5 261 83.5
Psat0s1952g0120 Pisum sativum HOM05D005959 ORTHO05D007263 2.6e-112 409.1 263 82.5
CsaV3_3G035240 Cucumis sativus L. HOM05D005959 ORTHO05D007263 3.5e-112 408.7 263 82.9
Lj1g0020453 Lotus japonicus HOM05D005959 ORTHO05D007263 4.5e-112 408.3 259 83.0
Hund12071 Selenicereus undatus HOM05D005959 ORTHO05D007263 4.5e-112 408.3 265 81.1
Ca_08807_v3 Cicer arietinum L. HOM05D005959 ORTHO05D007263 1.0e-111 407.1 263 83.3
PGR004G1166 Punica granatum HOM05D005959 ORTHO05D007263 1.0e-111 407.1 263 82.5
SGA_v2.0_scaffold94G28648 Striga asiatica HOM05D005959 ORTHO05D007263 1.0e-111 407.1 265 80.4
MELO3C009294.2 Cucumis melo HOM05D005959 ORTHO05D007263 1.7e-111 406.4 263 82.5
Phvul.001G172900 Phaseolus vulgaris HOM05D005959 ORTHO05D007263 1.7e-111 406.4 262 80.5
TPR.G21452 Trifolium pratense HOM05D005959 ORTHO05D007263 2.2e-111 406.0 263 81.7
Sc01g0003780 Simmondsia chinensis HOM05D005959 ORTHO05D007263 2.9e-111 405.6 263 81.0
arahy.Tifrunner.gnm1.ann1.R87Y2D Arachis hypogaea HOM05D005959 ORTHO05D007263 3.8e-111 405.2 262 80.9
Lj2A103T72 Lonicera japonica HOM05D005959 ORTHO05D007263 6.5e-111 404.4 263 81.7
Medtr7g100160 Medicago truncatula HOM05D005959 ORTHO05D007263 1.5e-110 403.3 263 81.7
CSS0020892 Camellia sinensis var. sinensis HOM05D005959 ORTHO05D007263 1.9e-110 402.9 265 79.6
Carub.0004s1924 Capsella rubella HOM05D005959 ORTHO05D007263 1.9e-110 402.9 264 80.3
CARHR132260 Cardamine hirsuta HOM05D005959 ORTHO05D007263 1.9e-110 402.9 264 79.9
CANSAT80G1914 Cannabis sativa HOM05D005959 ORTHO05D007263 3.2e-110 402.1 261 80.5
EL10Ac7g17275 Beta vulgaris HOM05D005959 ORTHO05D007263 7.2e-110 401.0 265 80.8
Thhalv10017068m.g Eutrema salsugineum HOM05D005959 ORTHO05D007263 7.2e-110 401.0 262 80.2
Lalb_Chr25g0289351 Lupinus albus HOM05D005959 ORTHO05D007263 2.7e-109 399.1 263 80.6
A04p28510 Brassica napus HOM05D005959 ORTHO05D007263 3.6e-109 398.7 259 80.3
ECA233G2168 Erigeron canadensis HOM05D005959 ORTHO05D007263 3.6e-109 398.7 253 84.6
arahy.Tifrunner.gnm1.ann1.T45XFJ Arachis hypogaea HOM05D005959 ORTHO05D007263 6.1e-109 397.9 262 80.2
BraA04t18329Z Brassica rapa HOM05D005959 ORTHO05D007263 6.1e-109 397.9 259 79.9
AT2G37330 Arabidopsis thaliana HOM05D005959 ORTHO05D007263 8.0e-109 397.5 264 78.8
PSO339G1263 Papaver somniferum HOM05D005959 ORTHO05D007263 8.0e-109 397.5 258 82.6
C04p65830 Brassica napus HOM05D005959 ORTHO05D007263 1.0e-108 397.1 259 79.9
Sabra16G0089800 Salix brachista HOM05D005959 ORTHO05D007263 1.8e-108 396.4 261 82.4
Sopen10g035320 Solanum pennellii HOM05D005959 ORTHO05D007263 3.0e-108 395.6 253 82.6
BcaC02g07517 Brassica carinata HOM05D005959 ORTHO05D007263 4.0e-108 395.2 259 79.5
BolC4t28086H Brassica oleracea HOM05D005959 ORTHO05D007263 4.0e-108 395.2 259 79.5
PSO384G3658 Papaver somniferum HOM05D005959 ORTHO05D007263 6.7e-108 394.4 258 81.8
Sp4g19650 Schrenkiella parvula HOM05D005959 ORTHO05D007263 6.7e-108 394.4 262 78.6
Sed0012545 Sechium edule HOM05D005959 ORTHO05D007263 6.7e-108 394.4 263 80.2
MBI14_g34528_MAGBIO Magnolia biondii HOM05D005959 ORTHO05D007263 1.2e-107 393.7 257 82.9
AL4G33710 Arabidopsis lyrata HOM05D005959 ORTHO05D007263 1.5e-107 393.3 264 78.0
BraA05t19827Z Brassica rapa HOM05D005959 ORTHO05D007263 1.5e-107 393.3 262 78.6
A05p08590 Brassica napus HOM05D005959 ORTHO05D007263 2.0e-107 392.9 262 78.2
CDE07G0433 Ceratophyllum demersum HOM05D005959 ORTHO05D007263 2.6e-107 392.5 265 77.4
BcaC02g11852 Brassica carinata HOM05D005959 ORTHO05D007263 4.4e-107 391.7 262 78.2
THA.LOC104823437 Tarenaya hassleriana HOM05D005959 ORTHO05D007263 1.7e-106 389.8 264 79.2
C04p10680 Brassica napus HOM05D005959 ORTHO05D007263 6.3e-106 387.9 260 78.1
BolC4t22661H Brassica oleracea HOM05D005959 ORTHO05D007263 6.3e-106 387.9 260 78.1
Lalb_Chr20g0113031 Lupinus albus HOM05D005959 ORTHO05D007263 1.4e-105 386.7 262 77.1
Aa31LG5G22650 Aethionema arabicum HOM05D005959 ORTHO05D007263 2.4e-105 386.0 261 77.4
Ah.15g091970 Amaranthus hybridus HOM05D005959 ORTHO05D007263 4.1e-105 385.2 265 78.1
BcaB06g28984 Brassica carinata HOM05D005959 ORTHO05D007263 5.3e-105 384.8 251 80.9
CAN.G687.19 Capsicum annuum HOM05D005959 ORTHO05D007263 7.0e-105 384.4 241 84.2
HPP92_021201 Vanilla planifolia HOM05D005959 ORTHO05D007263 9.1e-105 384.0 263 76.4
BcaB02g09288 Brassica carinata HOM05D005959 ORTHO05D007263 1.6e-104 383.3 262 76.7
Os05g0119000 Oryza sativa ssp. japonica HOM05D005959 ORTHO05D007263 2.0e-104 382.9 258 78.3
Gohir.A04G077900 Gossypium hirsutum HOM05D005959 ORTHO05D007263 4.5e-104 381.7 286 74.8
CiPaw.09G185300 Carya illinoinensis HOM05D005959 ORTHO05D007263 7.7e-104 380.9 225 89.8
vmacro20093 Vaccinium macrocarpon HOM05D005959 ORTHO05D007263 1.7e-103 379.8 287 74.6
Aa31LG5G22670 Aethionema arabicum HOM05D005959 ORTHO05D007263 2.5e-102 375.9 253 76.7
SEGI_41460 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 1.4e-100 370.2 259 75.3
GSVIVG01025576001 Vitis vinifera HOM05D005959 ORTHO05D007263 3.0e-100 369.0 225 87.1
Cpa.g.sc114.24 Carica papaya HOM05D005959 ORTHO05D007263 8.8e-100 367.5 238 81.9
Hma1.2p1_0111F.1_g053380 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 4.4e-99 365.2 262 72.5
Aa31LG5G22660 Aethionema arabicum HOM05D005959 ORTHO05D007263 9.8e-99 364.0 264 70.8
Hma1.2p1_0111F.1_g053390 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 9.8e-99 364.0 262 71.8
Mapoly0099s0026 Marchantia polymorpha HOM05D005959 ORTHO05D007263 4.8e-98 361.7 258 73.3
Eucgr.A01210 Eucalyptus grandis HOM05D005959 ORTHO05D007263 1.1e-97 360.5 257 75.1
AUR62041007 Chenopodium quinoa HOM05D005959 ORTHO05D007263 3.8e-95 352.1 265 74.0
Pp3c20_6820 Physcomitrium patens HOM05D005959 ORTHO05D007263 9.5e-94 347.4 265 69.4
AagrBONN_evm.TU.Sc2ySwM_344.2577 Anthoceros agrestis HOM05D005959 ORTHO05D007263 2.6e-91 339.3 261 68.2
COL.COLO4_10311 Corchorus olitorius HOM05D005959 ORTHO05D007263 9.2e-89 330.9 265 70.9
SMO271G0174 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 1.7e-87 326.6 258 66.3
Dinv35677 Davidia involucrata HOM05D005959 ORTHO05D007263 8.9e-84 314.3 187 88.8
SEGI_29713 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 2.0e-80 303.1 252 65.9
CBR_g49882 Chara braunii HOM05D000019 ORTHO05D000048 1.5e-67 260.4 254 55.1
Actinidia05285 Actinidia chinensis HOM05D005959 ORTHO05D007263 2.1e-64 250.0 178 72.5
ClCG10G020740 Citrullus lanatus HOM05D005959 ORTHO05D007263 4.6e-64 248.8 152 86.2
Nitab4.5_0002073g0040 Nicotiana tabacum HOM05D005959 ORTHO05D007263 1.1e-62 244.2 265 55.5
Nn2g12822 Nelumbo nucifera HOM05D005959 ORTHO05D007263 1.3e-58 230.7 161 78.3
Actinidia11237 Actinidia chinensis HOM05D005959 ORTHO05D007263 3.2e-57 226.1 154 78.6
SMO364G0860 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 4.9e-50 202.2 248 44.4
Actinidia19734 Actinidia chinensis HOM05D005959 ORTHO05D007263 4.6e-48 195.7 265 48.3
CBR_g3295 Chara braunii HOM05D005959 ORTHO05D007263 8.1e-45 184.9 250 40.4
AagrBONN_evm.TU.Sc2ySwM_344.2052 Anthoceros agrestis HOM05D005959 ORTHO05D007263 2.2e-42 176.8 239 42.7
CDE04G1398 Ceratophyllum demersum HOM05D004061 ORTHO05D004693 1.7e-34 150.6 98 77.6
AagrBONN_evm.TU.Sc2ySwM_344.389 Anthoceros agrestis HOM05D005959 ORTHO05D007263 1.2e-32 144.4 240 35.4
Actinidia13264 Actinidia chinensis HOM05D005959 ORTHO05D007263 2.1e-32 143.7 96 80.2
Nn5g28122 Nelumbo nucifera HOM05D005959 ORTHO05D007263 7.4e-30 135.2 77 89.6
MD08G1090300 Malus domestica HOM05D005959 ORTHO05D007263 5.3e-28 129.0 117 61.5
Nn1g07598 Nelumbo nucifera HOM05D005959 ORTHO05D007263 2.6e-27 126.7 75 85.3
Cre16.g673000 Chlamydomonas reinhardtii HOM05D005959 ORTHO05D007263 2.7e-24 116.7 243 33.7
TAR629G2669 Trochodendron aralioides HOM05D002023 ORTHO05D002049 2.2e-21 107.1 101 63.4
Oeu004323.1 Olea europaea HOM05D005959 ORTHO05D007263 6.5e-10 68.9 75 57.3


User provided reference genes

Program Settings