Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_020676 Daucus carota HOM05D007071 ORTHO05D008677 8.1e-88 327.0 162 100.0
Duzib093G1750 Durio zibethinus HOM05D007071 ORTHO05D008677 7.7e-46 187.6 166 58.4
Dinv25088 Davidia involucrata HOM05D007071 ORTHO05D008677 5.0e-45 184.9 160 61.2
Thecc.05G182200 Theobroma cacao HOM05D007071 ORTHO05D008677 6.5e-45 184.5 165 58.2
TAR633G1119 Trochodendron aralioides HOM05D007071 ORTHO05D008677 4.2e-44 181.8 174 54.6
Actinidia37784 Actinidia chinensis HOM05D007071 ORTHO05D008677 5.5e-44 181.4 162 60.5
THA.LOC104809942 Tarenaya hassleriana HOM05D007071 ORTHO05D008677 1.2e-43 180.3 173 53.8
PSO339G2219 Papaver somniferum HOM05D007071 ORTHO05D008677 4.6e-43 178.3 176 54.5
Peaxi162Scf00414g00006 Petunia axillaris HOM05D007071 ORTHO05D008677 1.0e-42 177.2 162 60.5
BolC9t59762H Brassica oleracea HOM05D007071 ORTHO05D008677 3.0e-42 175.6 160 53.8
Gohir.D09G127800 Gossypium hirsutum HOM05D007071 ORTHO05D008677 3.0e-42 175.6 165 57.0
C09p70180 Brassica napus HOM05D007071 ORTHO05D008677 3.9e-42 175.3 160 53.8
Gorai.006G146400 Gossypium raimondii HOM05D007071 ORTHO05D008677 3.9e-42 175.3 166 56.6
TWI77G0807 Tripterygium wilfordii HOM05D007071 ORTHO05D008677 3.9e-42 175.3 179 53.1
Sp6g36270 Schrenkiella parvula HOM05D007071 ORTHO05D008677 5.1e-42 174.9 175 52.6
Sc01g0005210 Simmondsia chinensis HOM05D007071 ORTHO05D008677 1.5e-41 173.3 173 53.2
Ciclev10012576m.g Citrus clementina HOM05D007071 ORTHO05D008677 2.5e-41 172.6 174 51.1
Gohir.A09G131600 Gossypium hirsutum HOM05D007071 ORTHO05D008677 2.5e-41 172.6 166 56.0
Atru.chr8.1251 Acer truncatum HOM05D007071 ORTHO05D008677 3.3e-41 172.2 174 53.4
Peaxi162Scf00645g00018 Petunia axillaris HOM05D007071 ORTHO05D008677 4.3e-41 171.8 165 60.0
Peaxi162Scf00425g00036 Petunia axillaris HOM05D007071 ORTHO05D008677 5.7e-41 171.4 165 59.4
Cpa.g.sc222.1 Carica papaya HOM05D007071 ORTHO05D008677 9.7e-41 170.6 183 53.6
Haze_20090 Corylus avellana HOM05D007071 ORTHO05D008677 9.7e-41 170.6 179 50.8
Aa31sc291G40 Aethionema arabicum HOM05D007071 ORTHO05D008677 2.8e-40 169.1 174 51.7
Potri.016G064200 Populus trichocarpa HOM05D007071 ORTHO05D008677 2.8e-40 169.1 177 49.2
vmacro07528 Vaccinium macrocarpon HOM05D007071 ORTHO05D008677 2.8e-40 169.1 187 50.8
A10p29800 Brassica napus HOM05D007071 ORTHO05D008677 3.7e-40 168.7 161 52.2
BraA10t45019Z Brassica rapa HOM05D007071 ORTHO05D008677 3.7e-40 168.7 161 52.2
ECA248G1335 Erigeron canadensis HOM05D007071 ORTHO05D008677 4.8e-40 168.3 161 54.7
Eucgr.A02532 Eucalyptus grandis HOM05D007071 ORTHO05D008677 8.2e-40 167.5 177 51.4
Oeu028127.1 Olea europaea HOM05D007071 ORTHO05D008677 1.1e-39 167.2 164 54.9
PGR004G1089 Punica granatum HOM05D007071 ORTHO05D008677 5.3e-39 164.9 171 51.5
CiPaw.09G025100 Carya illinoinensis HOM05D007071 ORTHO05D008677 6.9e-39 164.5 177 50.8
Thhalv10014151m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 6.9e-39 164.5 172 51.2
ATR0697G054 Amborella trichopoda HOM05D007071 ORTHO05D008677 9.1e-39 164.1 189 50.3
Nitab4.5_0005508g0020 Nicotiana tabacum HOM05D007071 ORTHO05D008677 1.2e-38 163.7 160 56.9
Cfa020101 Carpinus fangiana HOM05D007071 ORTHO05D008677 1.5e-38 163.3 179 51.4
Lj1g0020560 Lotus japonicus HOM05D007071 ORTHO05D008677 1.5e-38 163.3 172 50.6
Thhalv10014358m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 2.0e-38 162.9 175 49.7
Glyma.19G203500 Glycine max HOM05D007071 ORTHO05D008677 2.6e-38 162.5 176 50.0
AL6G16680 Arabidopsis lyrata HOM05D007071 ORTHO05D008677 3.4e-38 162.2 175 49.7
Manes.08G038400 Manihot esculenta HOM05D007071 ORTHO05D008677 5.9e-38 161.4 178 48.9
Nitab4.5_0000117g0100 Nicotiana tabacum HOM05D007071 ORTHO05D008677 5.9e-38 161.4 185 53.5
Nn2g14444 Nelumbo nucifera HOM05D007071 ORTHO05D008677 1.0e-37 160.6 178 51.7
AT5G06590 Arabidopsis thaliana HOM05D007071 ORTHO05D008677 1.3e-37 160.2 174 49.4
Carub.0006s0547 Capsella rubella HOM05D007071 ORTHO05D008677 1.3e-37 160.2 173 48.6
SGA_v2.0_scaffold31G12809 Striga asiatica HOM05D007071 ORTHO05D008677 1.3e-37 160.2 167 55.1
CARHR206610 Cardamine hirsuta HOM05D007071 ORTHO05D008677 2.2e-37 159.5 175 49.1
HanXRQChr11g0347671 Helianthus annuus HOM05D007071 ORTHO05D008677 2.2e-37 159.5 163 55.2
GSVIVG01022502001 Vitis vinifera HOM05D007071 ORTHO05D008677 2.2e-37 159.5 169 51.5
Aqoxy2G00613 Aquilegia oxysepala HOM05D007071 ORTHO05D008677 2.9e-37 159.1 180 50.0
Glyma.03G206000 Glycine max HOM05D007071 ORTHO05D008677 3.8e-37 158.7 172 49.4
Sed0020351 Sechium edule HOM05D007071 ORTHO05D008677 5.0e-37 158.3 174 52.3
CANSAT64G1821 Cannabis sativa HOM05D007071 ORTHO05D008677 8.5e-37 157.5 167 52.1
MBI11_g24568_MAGBIO Magnolia biondii HOM05D007071 ORTHO05D008677 8.5e-37 157.5 213 46.0
Sopen01g021160 Solanum pennellii HOM05D007071 ORTHO05D008677 1.4e-36 156.8 165 53.3
EL10Ac5g11787 Beta vulgaris HOM05D007071 ORTHO05D008677 9.4e-36 154.1 165 53.3
PGSC0003DMG400031498 Solanum tuberosum HOM05D007071 ORTHO05D008677 9.4e-36 154.1 161 52.8
VMungo1383G1243 Vigna mungo HOM05D007071 ORTHO05D008677 9.4e-36 154.1 176 48.3
MSTRG.5919 Avicennia marina HOM05D007071 ORTHO05D008677 1.6e-35 153.3 167 54.5
MELO3C009585.2 Cucumis melo HOM05D007071 ORTHO05D008677 7.9e-35 151.0 183 47.5
CsaV3_3G038410 Cucumis sativus L. HOM05D007071 ORTHO05D008677 1.0e-34 150.6 183 47.5
Sabra16G0066300 Salix brachista HOM05D007071 ORTHO05D008677 3.0e-34 149.1 222 39.2
Phvul.001G199700 Phaseolus vulgaris HOM05D007071 ORTHO05D008677 8.8e-34 147.5 193 45.1
Gorai.007G240500 Gossypium raimondii HOM05D007071 ORTHO05D008677 7.4e-33 144.4 167 49.7
CSS0047921 Camellia sinensis var. sinensis HOM05D007071 ORTHO05D008677 1.3e-32 143.7 159 50.9
CDE10G1223 Ceratophyllum demersum HOM05D007071 ORTHO05D008677 1.3e-32 143.7 183 46.4
Ah.12g059560 Amaranthus hybridus HOM05D007071 ORTHO05D008677 2.2e-32 142.9 172 47.7
ClCG10G017880 Citrullus lanatus HOM05D007071 ORTHO05D008677 3.7e-32 142.1 218 40.4
Migut.J00748 Erythranthe guttata HOM05D007071 ORTHO05D008677 1.1e-31 140.6 160 48.1
QL07p025881 Quercus lobata HOM05D007071 ORTHO05D008677 1.8e-31 139.8 182 46.7
Rhsim03G0057500 Rhododendron simsii HOM05D007071 ORTHO05D008677 2.6e-30 136.0 123 59.3
Lsat_1_v5_gn_1_56481 Lactuca sativa HOM05D000137 ORTHO05D000503 3.5e-30 135.6 127 59.1
Cc06_g07070 Coffea canephora HOM05D007071 ORTHO05D008677 2.2e-29 132.9 170 47.1
Medtr7g107150 Medicago truncatula HOM05D007071 ORTHO05D008677 3.8e-29 132.1 176 46.6
Lalb_Chr25g0287781 Lupinus albus HOM05D007071 ORTHO05D008677 8.5e-29 131.0 148 48.6
FvH4_6g21190 Fragaria vesca HOM05D007071 ORTHO05D008677 1.6e-27 126.7 160 44.4
FAN14G3447 Fragaria x ananassa HOM05D007071 ORTHO05D008677 1.6e-27 126.7 160 44.4
TPR.G14411 Trifolium pratense HOM05D007071 ORTHO05D008677 3.6e-27 125.6 140 49.3
RcHm_v2.0_Chr3g0477671 Rosa chinensis HOM05D007071 ORTHO05D008677 6.1e-27 124.8 134 51.5
SHI31768 Sapria himalayana HOM05D007071 ORTHO05D008677 1.8e-26 123.2 105 56.2
Prupe.7G088000 Prunus persica HOM05D007071 ORTHO05D008677 3.0e-26 122.5 167 45.5
Psat3g026600 Pisum sativum HOM05D007071 ORTHO05D008677 5.2e-26 121.7 139 51.8
FAN09G1879 Fragaria x ananassa HOM05D007071 ORTHO05D008677 1.1e-25 120.6 131 48.9
Eucgr.C00285 Eucalyptus grandis HOM05D007071 ORTHO05D008677 1.5e-25 120.2 97 59.8
Gohir.A07G089166 Gossypium hirsutum HOM05D007071 ORTHO05D008677 7.5e-25 117.9 85 64.7
Hund10779 Selenicereus undatus HOM05D007071 ORTHO05D008677 2.2e-24 116.3 144 43.8
MD14G1046200 Malus domestica HOM05D007071 ORTHO05D008677 6.3e-24 114.8 162 42.6
arahy.Tifrunner.gnm1.ann1.P13BQJ Arachis hypogaea HOM05D007071 ORTHO05D008677 2.4e-23 112.8 136 47.8
arahy.Tifrunner.gnm1.ann1.B8MRUG Arachis hypogaea HOM05D007071 ORTHO05D008677 5.3e-23 111.7 159 43.4
Solyc01g056990.3 Solanum lycopersicum HOM05D007071 ORTHO05D008677 1.9e-20 103.2 112 52.7
COL.COLO4_29462 Corchorus olitorius HOM05D007071 ORTHO05D008677 5.5e-20 101.7 101 53.5
SEGI_27522 Sequoiadendron giganteum HOM05D007071 ORTHO05D008677 9.4e-20 100.9 190 35.3
Zm00001eb134480 Zea mays HOM05D007071 ORTHO05D008677 2.0e-17 93.2 177 36.7
AUR62036298 Chenopodium quinoa HOM05D007071 ORTHO05D008677 7.5e-17 91.3 165 38.8
AUR62038410 Chenopodium quinoa HOM05D000573 ORTHO05D008677 4.1e-15 85.5 166 36.7
AagrBONN_evm.TU.Sc2ySwM_117.1490 Anthoceros agrestis HOM05D007071 ORTHO05D008677 1.9e-12 76.6 182 31.3
Pp3c4_24350 Physcomitrium patens HOM05D007071 ORTHO05D008677 6.8e-10 68.2 96 41.7
Actinidia03957 Actinidia chinensis HOM05D002116 ORTHO05D002438 8.8e-10 67.8 63 55.6
CiPaw.16G104200 Carya illinoinensis HOM05D007071 ORTHO05D008677 1.5e-09 67.0 66 51.5
SMO165G0174 Selaginella moellendorffii HOM05D007071 ORTHO05D008677 1.5e-09 67.0 140 34.3
Pp3c26_10880 Physcomitrium patens HOM05D007071 ORTHO05D008677 5.7e-09 65.1 136 33.8
Os12g0623400 Oryza sativa ssp. japonica HOM05D007071 ORTHO05D008677 6.3e-08 61.6 95 41.1
QL02p030777 Quercus lobata HOM05D007071 ORTHO05D008677 1.4e-07 60.5 40 67.5
MD12G1047700 Malus domestica HOM05D007071 ORTHO05D008677 5.4e-07 58.5 45 60.0
Mapoly0045s0075 Marchantia polymorpha HOM05D007071 ORTHO05D008677 5.9e-06 55.1 105 29.5


User provided reference genes

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