Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_020545 Daucus carota HOM05D003833 ORTHO05D004209 5.4e-148 527.7 279 100.0
Dinv08489 Davidia involucrata HOM05D003833 ORTHO05D004209 5.4e-124 448.0 273 83.5
Lj1A1105T22 Lonicera japonica HOM05D003833 ORTHO05D004209 6.0e-123 444.5 273 85.3
Migut.K00123 Erythranthe guttata HOM05D003833 ORTHO05D004209 1.9e-121 439.5 277 83.0
CSS0041120 Camellia sinensis var. sinensis HOM05D003833 ORTHO05D004209 5.6e-121 438.0 270 84.1
Manes.09G008001 Manihot esculenta HOM05D003833 ORTHO05D004209 7.3e-121 437.6 273 82.4
Oeu029492.1 Olea europaea HOM05D003833 ORTHO05D004209 2.1e-120 436.0 277 82.7
Actinidia39173 Actinidia chinensis HOM05D003833 ORTHO05D004209 3.6e-120 435.3 275 81.1
MSTRG.10798 Avicennia marina HOM05D003833 ORTHO05D004209 4.0e-119 431.8 273 83.2
Lj2A394G34 Lonicera japonica HOM05D003833 ORTHO05D004209 8.9e-119 430.6 269 82.2
PGSC0003DMG400010441 Solanum tuberosum HOM05D003833 ORTHO05D004209 1.5e-118 429.9 269 82.5
Lsat_1_v5_gn_4_129320 Lactuca sativa HOM05D003833 ORTHO05D004209 3.4e-118 428.7 279 80.6
Solyc02g068640.3 Solanum lycopersicum HOM05D003833 ORTHO05D004209 4.4e-118 428.3 272 81.6
Sopen02g017810 Solanum pennellii HOM05D003833 ORTHO05D004209 4.4e-118 428.3 272 81.6
Hund24632 Selenicereus undatus HOM05D003833 ORTHO05D004209 5.8e-118 427.9 279 79.2
MSTRG.15651 Avicennia marina HOM05D003833 ORTHO05D004209 7.6e-118 427.6 273 80.6
Dinv34388 Davidia involucrata HOM05D003833 ORTHO05D004209 2.2e-117 426.0 293 77.1
CANSAT64G1401 Cannabis sativa HOM05D003833 ORTHO05D004209 3.8e-117 425.2 269 82.2
FAN05G1327 Fragaria x ananassa HOM05D003833 ORTHO05D004209 3.8e-117 425.2 273 79.9
FAN05G4135 Fragaria x ananassa HOM05D003833 ORTHO05D004209 3.8e-117 425.2 273 79.9
FvH4_6g25150 Fragaria vesca HOM05D003833 ORTHO05D004209 1.9e-116 422.9 273 79.5
Peaxi162Scf00149g00116 Petunia axillaris HOM05D003833 ORTHO05D004209 1.9e-116 422.9 283 78.8
AUR62030362 Chenopodium quinoa HOM05D003833 ORTHO05D004209 2.4e-116 422.5 272 81.2
EL10Ac3g07192 Beta vulgaris HOM05D003833 ORTHO05D004209 4.2e-116 421.8 272 81.2
Atru.chr1.1452 Acer truncatum HOM05D003833 ORTHO05D004209 7.1e-116 421.0 277 79.8
TAR623G1635 Trochodendron aralioides HOM05D003833 ORTHO05D004209 7.1e-116 421.0 272 79.8
ECA232G1919 Erigeron canadensis HOM05D003833 ORTHO05D004209 1.6e-115 419.9 272 80.9
SGA_v2.0_scaffold94G28522 Striga asiatica HOM05D003833 ORTHO05D004209 1.6e-115 419.9 273 78.4
FAN02G2058 Fragaria x ananassa HOM05D003833 ORTHO05D004209 2.1e-115 419.5 273 78.8
Ah.04g151120 Amaranthus hybridus HOM05D003833 ORTHO05D004209 6.0e-115 417.9 273 80.2
Atru.chr1.1464 Acer truncatum HOM05D003833 ORTHO05D004209 7.8e-115 417.5 271 80.8
HanXRQChr09g0266491 Helianthus annuus HOM05D003833 ORTHO05D004209 1.0e-114 417.2 272 77.9
Cfa016709 Carpinus fangiana HOM05D003833 ORTHO05D004209 1.3e-114 416.8 272 77.9
Prupe.7G045500 Prunus persica HOM05D003833 ORTHO05D004209 1.7e-114 416.4 271 77.9
RcHm_v2.0_Chr1g0334171 Rosa chinensis HOM05D003833 ORTHO05D004209 1.7e-114 416.4 273 78.4
Haze_19732 Corylus avellana HOM05D003833 ORTHO05D004209 3.0e-114 415.6 272 77.9
Lj1g0026826 Lotus japonicus HOM05D003833 ORTHO05D004209 3.0e-114 415.6 270 79.6
QL07p007726 Quercus lobata HOM05D003833 ORTHO05D004209 5.1e-114 414.8 270 77.8
Sc13g0001320 Simmondsia chinensis HOM05D003833 ORTHO05D004209 6.6e-114 414.5 279 78.9
Sed0017232 Sechium edule HOM05D003833 ORTHO05D004209 8.7e-114 414.1 271 79.7
TWI53G1459 Tripterygium wilfordii HOM05D003833 ORTHO05D004209 1.1e-113 413.7 271 79.7
ClCG04G004210 Citrullus lanatus HOM05D003833 ORTHO05D004209 1.5e-113 413.3 271 79.3
PGR042G2932 Punica granatum HOM05D003833 ORTHO05D004209 1.9e-113 412.9 270 80.7
FAN14G1808 Fragaria x ananassa HOM05D003833 ORTHO05D004209 2.5e-113 412.5 282 77.0
Sc13g0001340 Simmondsia chinensis HOM05D003833 ORTHO05D004209 3.3e-113 412.1 279 79.2
MD12G1094200 Malus domestica HOM05D003833 ORTHO05D004209 7.3e-113 411.0 273 76.9
TPR.G9312 Trifolium pratense HOM05D003833 ORTHO05D004209 7.3e-113 411.0 271 79.0
MELO3C019039.2 Cucumis melo HOM05D003833 ORTHO05D004209 9.6e-113 410.6 271 78.2
CsaV3_4G027860 Cucumis sativus L. HOM05D003833 ORTHO05D004209 9.6e-113 410.6 271 78.2
Cpa.g.sc49.96 Carica papaya HOM05D003833 ORTHO05D004209 2.1e-112 409.5 273 76.9
Sed0027268 Sechium edule HOM05D003833 ORTHO05D004209 2.1e-112 409.5 271 77.9
GSVIVG01033588001 Vitis vinifera HOM05D003833 ORTHO05D004209 2.1e-112 409.5 272 79.0
Ca_08401_v3 Cicer arietinum L. HOM05D003833 ORTHO05D004209 3.6e-112 408.7 270 79.3
Potri.006G042600 Populus trichocarpa HOM05D003833 ORTHO05D004209 3.6e-112 408.7 280 77.1
PGR142G2709 Punica granatum HOM05D003833 ORTHO05D004209 3.6e-112 408.7 269 79.9
Sabra06G0028900 Salix brachista HOM05D003833 ORTHO05D004209 3.6e-112 408.7 280 76.4
Psat3g078000 Pisum sativum HOM05D003833 ORTHO05D004209 6.2e-112 407.9 270 78.1
Aqoxy2G03781 Aquilegia oxysepala HOM05D003833 ORTHO05D004209 1.1e-111 407.1 271 77.9
arahy.Tifrunner.gnm1.ann1.C9KHWR Arachis hypogaea HOM05D003833 ORTHO05D004209 1.1e-111 407.1 271 78.6
CiPaw.09G044700 Carya illinoinensis HOM05D003833 ORTHO05D004209 1.1e-111 407.1 272 77.2
Aqoxy2G00325 Aquilegia oxysepala HOM05D003833 ORTHO05D004209 1.8e-111 406.4 271 77.9
Gohir.A07G024700 Gossypium hirsutum HOM05D003833 ORTHO05D004209 1.8e-111 406.4 274 76.6
MD14G1084400 Malus domestica HOM05D003833 ORTHO05D004209 1.8e-111 406.4 273 75.5
Medtr7g090160 Medicago truncatula HOM05D003833 ORTHO05D004209 4.0e-111 405.2 271 77.9
Lalb_Chr14g0365931 Lupinus albus HOM05D003833 ORTHO05D004209 5.3e-111 404.8 270 78.1
VMungo1383G2371 Vigna mungo HOM05D003833 ORTHO05D004209 4.5e-110 401.7 269 78.1
Thecc.05G140900 Theobroma cacao HOM05D003833 ORTHO05D004209 5.8e-110 401.4 273 76.9
Duzib093G1609 Durio zibethinus HOM05D003833 ORTHO05D004209 9.9e-110 400.6 270 77.8
AUR62040845 Chenopodium quinoa HOM05D003833 ORTHO05D004209 2.9e-109 399.1 272 78.7
Ciclev10005607m.g Citrus clementina HOM05D003833 ORTHO05D004209 3.8e-109 398.7 270 77.8
Gorai.001G029600 Gossypium raimondii HOM05D003833 ORTHO05D004209 3.8e-109 398.7 272 75.7
Phvul.001G124300 Phaseolus vulgaris HOM05D003833 ORTHO05D004209 3.8e-109 398.7 269 77.3
Glyma.19G131500 Glycine max HOM05D003833 ORTHO05D004209 4.9e-109 398.3 270 77.0
PSO210G1377 Papaver somniferum HOM05D003833 ORTHO05D004209 8.4e-109 397.5 275 74.9
Gohir.D07G028300 Gossypium hirsutum HOM05D003833 ORTHO05D004209 1.1e-108 397.1 272 75.4
PSO832G0079 Papaver somniferum HOM05D003833 ORTHO05D004209 1.9e-108 396.4 275 74.9
Carub.0006s1298 Capsella rubella HOM05D003833 ORTHO05D004209 4.2e-108 395.2 274 75.9
Ah.13g077020 Amaranthus hybridus HOM05D003833 ORTHO05D004209 5.4e-108 394.8 286 73.1
THA.LOC104816595 Tarenaya hassleriana HOM05D003833 ORTHO05D004209 7.1e-108 394.4 276 76.1
Glyma.03G129100 Glycine max HOM05D003833 ORTHO05D004209 9.3e-108 394.0 271 75.6
COL.COLO4_33945 Corchorus olitorius HOM05D003833 ORTHO05D004209 1.2e-107 393.7 273 76.6
PSO782G0909 Papaver somniferum HOM05D003833 ORTHO05D004209 1.6e-107 393.3 275 73.8
Nitab4.5_0003379g0050 Nicotiana tabacum HOM05D003833 ORTHO05D004209 3.5e-107 392.1 335 65.7
arahy.Tifrunner.gnm1.ann1.LP5CTB Arachis hypogaea HOM05D003833 ORTHO05D004209 4.6e-107 391.7 301 70.8
Thhalv10014353m.g Eutrema salsugineum HOM05D003833 ORTHO05D004209 6.0e-107 391.3 274 75.5
AL6G25600 Arabidopsis lyrata HOM05D003833 ORTHO05D004209 1.3e-106 390.2 274 75.2
BcaC04g19007 Brassica carinata HOM05D003833 ORTHO05D004209 1.8e-106 389.8 274 74.5
AT5G14800 Arabidopsis thaliana HOM05D003833 ORTHO05D004209 3.0e-106 389.0 274 75.2
A10p23880 Brassica napus HOM05D003833 ORTHO05D004209 3.0e-106 389.0 274 74.5
CARHR198510 Cardamine hirsuta HOM05D003833 ORTHO05D004209 3.0e-106 389.0 274 74.8
Sp6g29240 Schrenkiella parvula HOM05D003833 ORTHO05D004209 3.0e-106 389.0 274 74.5
BcaB08g36945 Brassica carinata HOM05D003833 ORTHO05D004209 3.9e-106 388.7 274 74.5
A03p06820 Brassica napus HOM05D003833 ORTHO05D004209 8.7e-106 387.5 272 75.0
BolC9t59073H Brassica oleracea HOM05D003833 ORTHO05D004209 1.1e-105 387.1 274 74.1
Nitab4.5_0006282g0020 Nicotiana tabacum HOM05D003833 ORTHO05D004209 1.5e-105 386.7 322 67.7
C09p62360 Brassica napus HOM05D003833 ORTHO05D004209 2.5e-105 386.0 274 73.7
BraA10t44452Z Brassica rapa HOM05D003833 ORTHO05D004209 2.5e-105 386.0 274 74.1
Nn7g36480 Nelumbo nucifera HOM05D003833 ORTHO05D004209 2.1e-104 382.9 272 73.9
BraA03t10007Z Brassica rapa HOM05D003833 ORTHO05D004209 8.1e-104 380.9 276 73.9
BcaB01g05096 Brassica carinata HOM05D003833 ORTHO05D004209 1.1e-103 380.6 272 73.9
C03p07820 Brassica napus HOM05D003833 ORTHO05D004209 1.1e-103 380.6 272 73.9
BolC3t13281H Brassica oleracea HOM05D003833 ORTHO05D004209 1.1e-103 380.6 272 73.9
vmacro07822 Vaccinium macrocarpon HOM05D003833 ORTHO05D004209 6.9e-103 377.9 366 59.6
MBI13_g29520_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 5.8e-102 374.8 262 74.0
Cc06_g18620 Coffea canephora HOM05D003833 ORTHO05D004209 3.8e-101 372.1 253 76.7
Aa31LG11G14650 Aethionema arabicum HOM05D003833 ORTHO05D004209 6.4e-101 371.3 316 64.6
SHI05043 Sapria himalayana HOM05D003833 ORTHO05D004209 5.5e-100 368.2 265 72.5
CDE09G0749 Ceratophyllum demersum HOM05D003833 ORTHO05D004209 3.9e-98 362.1 268 69.8
CDE02G3693 Ceratophyllum demersum HOM05D003833 ORTHO05D004209 1.1e-97 360.5 268 69.0
ATR0721G010 Amborella trichopoda HOM05D003833 ORTHO05D004209 1.6e-96 356.7 271 69.4
Os01g0948400 Oryza sativa ssp. japonica HOM05D003833 ORTHO05D004209 2.8e-96 355.9 279 67.0
HPP92_001015 Vanilla planifolia HOM05D003833 ORTHO05D004209 3.7e-96 355.5 265 68.3
unitig_26.g8850 Utricularia gibba HOM05D003833 ORTHO05D004209 1.8e-95 353.2 247 74.9
SEGI_35199 Sequoiadendron giganteum HOM05D003833 ORTHO05D004209 4.6e-91 338.6 263 65.4
RhsimUnG0217200 Rhododendron simsii HOM05D003833 ORTHO05D004209 2.5e-89 332.8 485 45.6
Rhsim03G0034800 Rhododendron simsii HOM05D003833 ORTHO05D004209 7.4e-89 331.3 485 45.4
Eucgr.K01625 Eucalyptus grandis HOM05D003833 ORTHO05D004209 1.1e-87 327.4 211 82.5
Prupe.7G045400 Prunus persica HOM05D003833 ORTHO05D004209 2.2e-85 319.7 270 59.6
Zm00001eb141220 Zea mays HOM05D003833 ORTHO05D004209 2.5e-84 316.2 286 59.4
MD12G1091800 Malus domestica HOM05D003833 ORTHO05D004209 5.5e-84 315.1 270 59.6
SMO337G0103 Selaginella moellendorffii HOM05D003833 ORTHO05D004209 1.3e-82 310.5 263 59.7
Mapoly0029s0092 Marchantia polymorpha HOM05D003833 ORTHO05D004209 9.7e-81 304.3 265 59.6
AagrBONN_evm.TU.Sc2ySwM_368.1806 Anthoceros agrestis HOM05D003833 ORTHO05D004209 2.2e-80 303.1 263 59.3
AagrBONN_evm.TU.Sc2ySwM_368.156 Anthoceros agrestis HOM05D003833 ORTHO05D004209 3.7e-80 302.4 263 59.3
BolC3t20513H Brassica oleracea HOM05D003833 ORTHO05D004209 1.0e-77 294.3 248 64.1
BolC4t23181H Brassica oleracea HOM05D003833 ORTHO05D004209 3.6e-75 285.8 250 62.8
C03p82420 Brassica napus HOM05D003833 ORTHO05D004209 2.0e-73 280.0 277 57.0
C03p82400 Brassica napus HOM05D003833 ORTHO05D004209 2.6e-73 279.6 275 57.8
Pp3c10_15650 Physcomitrium patens HOM05D003833 ORTHO05D004209 9.7e-73 277.7 262 53.4
BcaC02g10661 Brassica carinata HOM05D003833 ORTHO05D004209 2.8e-72 276.2 253 61.7
BolC4t24169H Brassica oleracea HOM05D003833 ORTHO05D004209 4.8e-72 275.4 254 61.8
Dinv03868 Davidia involucrata HOM05D003833 ORTHO05D004209 1.4e-71 273.9 164 84.8
CBR_g16006 Chara braunii HOM05D003833 ORTHO05D004209 1.8e-71 273.5 279 52.3
BcaC06g33558 Brassica carinata HOM05D003833 ORTHO05D004209 2.4e-71 273.1 275 57.1
BcaC02g11392 Brassica carinata HOM05D003833 ORTHO05D004209 4.1e-71 272.3 277 56.7
C04p16080 Brassica napus HOM05D003833 ORTHO05D004209 9.1e-71 271.2 277 56.7
Cre03.g154550 Chlamydomonas reinhardtii HOM05D003833 ORTHO05D004209 9.4e-68 261.2 282 50.7
Duzib056G0002 Durio zibethinus HOM05D003833 ORTHO05D004209 4.4e-65 252.3 256 59.0
FAN10G2875 Fragaria x ananassa HOM05D005759 ORTHO05D007172 9.7e-65 251.1 301 52.8
BolC6t37672H Brassica oleracea HOM05D003833 ORTHO05D004209 1.8e-63 246.9 223 61.9
C06p25140 Brassica napus HOM05D003833 ORTHO05D004209 8.5e-61 238.0 278 52.5
Rhsim13G0081800 Rhododendron simsii HOM05D003833 ORTHO05D004209 3.6e-59 232.6 271 51.7
MCO05G631 Micromonas commoda HOM05D003833 ORTHO05D004209 4.7e-59 232.3 266 47.7
C04p26360 Brassica napus HOM05D003833 ORTHO05D004209 8.0e-59 231.5 251 53.8
RcHm_v2.0_Chr2g0125021 Rosa chinensis HOM05D003833 ORTHO05D004209 1.4e-58 230.7 140 82.1
BolC3t20511H Brassica oleracea HOM05D003833 ORTHO05D004209 5.5e-52 208.8 129 82.2
BcaC02g10122 Brassica carinata HOM05D003833 ORTHO05D004209 1.6e-51 207.2 248 49.6
BcaC08g44899 Brassica carinata HOM05D003833 ORTHO05D004209 5.7e-49 198.7 267 47.9
Eucgr.K01616 Eucalyptus grandis HOM05D003833 ORTHO05D004209 5.4e-47 192.2 136 76.5
SEGI_40635 Sequoiadendron giganteum HOM05D003833 ORTHO05D004209 5.9e-46 188.7 131 74.0
FAN06G3481 Fragaria x ananassa HOM05D003833 ORTHO05D004209 1.2e-43 181.0 164 63.4
MBI03_g45406_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 1.4e-42 177.6 148 64.2
MD12G1094100 Malus domestica HOM05D003833 ORTHO05D004209 3.0e-42 176.4 138 64.5
PRCOL_00005946 Prasinoderma coloniale HOM05D003833 ORTHO05D004209 2.2e-40 170.2 228 46.1
MCO04G012 Micromonas commoda HOM05D003833 ORTHO05D004209 8.3e-40 168.3 412 33.7
TAR623G0480 Trochodendron aralioides HOM05D003833 ORTHO05D004209 2.0e-38 163.7 96 86.5
MBI03_g17131_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 1.0e-37 161.4 130 65.4
MBI09_g02151_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 4.3e-36 156.0 120 70.8
Nn1g08168 Nelumbo nucifera HOM05D003833 ORTHO05D004209 1.7e-29 134.0 141 54.6
Haze_26946 Corylus avellana HOM05D003833 ORTHO05D004209 3.0e-29 133.3 257 33.5
Medtr1046s0010 Medicago truncatula HOM05D003833 ORTHO05D004209 9.5e-28 128.3 272 32.4
Haze_27356 Corylus avellana HOM05D003833 ORTHO05D004209 5.2e-26 122.5 290 30.7
RcHm_v2.0_Chr2g0125031 Rosa chinensis HOM05D003833 ORTHO05D004209 4.9e-24 115.9 136 49.3
FvH4_7g06311 Fragaria vesca HOM05D003833 ORTHO05D004209 1.9e-23 114.0 73 83.6
BcaNung06051 Brassica carinata HOM05D003833 ORTHO05D004209 2.5e-20 103.6 112 52.7
Aqoxy3G03819 Aquilegia oxysepala HOM05D003833 ORTHO05D004209 3.3e-20 103.2 150 45.3
Oeu050503.1 Olea europaea HOM05D003833 ORTHO05D004209 5.2e-18 95.9 71 74.6
CBR_g37250 Chara braunii HOM05D003833 ORTHO05D004209 8.9e-18 95.1 69 66.7
MBI10_g20272_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 3.4e-17 93.2 59 81.4
BcaC02g08088 Brassica carinata HOM05D003833 ORTHO05D004209 1.7e-16 90.9 52 86.5
C04p17110 Brassica napus HOM05D003833 ORTHO05D004209 2.2e-16 90.5 52 84.6
BolC4t23262H Brassica oleracea HOM05D003833 ORTHO05D004209 2.2e-16 90.5 52 84.6
BolC8t47752H Brassica oleracea HOM05D003833 ORTHO05D004209 4.9e-16 89.4 52 84.6
BcaC02g11310 Brassica carinata HOM05D003833 ORTHO05D004209 1.1e-15 88.2 52 84.6
FvH4_7g06312 Fragaria vesca HOM05D003833 ORTHO05D004209 1.9e-15 87.4 53 79.2
MD12G1091600 Malus domestica HOM05D003833 ORTHO05D004209 1.9e-15 87.4 64 65.6
C08p09060 Brassica napus HOM05D003833 ORTHO05D004209 9.2e-15 85.1 50 82.0
SGA_v2.0_scaffold44G16671 Striga asiatica HOM05D003833 ORTHO05D004209 4.6e-14 82.8 68 58.8
Gohir.D06G163101 Gossypium hirsutum HOM05D002585 ORTHO05D002917 5.1e-13 79.3 62 64.5
Gorai.011G171800 Gossypium raimondii HOM05D002585 ORTHO05D002917 5.1e-13 79.3 62 64.5
Gorai.008G052500 Gossypium raimondii HOM05D002585 ORTHO05D002917 4.3e-12 76.3 62 62.9
BolC4t24812H Brassica oleracea HOM05D003833 ORTHO05D004209 5.6e-12 75.9 79 50.6
Gohir.D13G165733 Gossypium hirsutum HOM05D002585 ORTHO05D002917 5.6e-12 75.9 62 61.3
CAN.G102.1 Capsicum annuum HOM05D000541 ORTHO05D000137 1.8e-10 70.9 55 61.8
SalBow6G3161 Salvia bowleyana HOM05D021775 ORTHO05D004209 9.2e-07 58.5 40 72.5


User provided reference genes

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