Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_020492 Daucus carota HOM05D007137 ORTHO05D008982 1.1e-89 333.2 162 100.0
CSS0026997 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 1.5e-62 243.0 164 70.1
Lju124C41G12 Lonicera japonica HOM05D007137 ORTHO05D008982 2.0e-62 242.7 163 71.8
Actinidia09328 Actinidia chinensis HOM05D007137 ORTHO05D008982 7.6e-62 240.7 165 71.5
AUR62026042 Chenopodium quinoa HOM05D007137 ORTHO05D008982 6.5e-61 237.7 161 67.7
MSTRG.6429 Avicennia marina HOM05D007137 ORTHO05D008982 7.1e-60 234.2 162 69.1
Cpa.g.sc92.53 Carica papaya HOM05D007137 ORTHO05D008982 7.1e-60 234.2 165 68.5
AUR62024453 Chenopodium quinoa HOM05D007137 ORTHO05D008982 7.1e-60 234.2 161 67.7
Potri.006G051500 Populus trichocarpa HOM05D007137 ORTHO05D008982 1.2e-59 233.4 164 67.7
Migut.J01757 Erythranthe guttata HOM05D007137 ORTHO05D008982 2.1e-59 232.6 165 69.7
Rhsim03G0024800 Rhododendron simsii HOM05D007137 ORTHO05D008982 2.1e-59 232.6 162 69.8
PGSC0003DMG400027277 Solanum tuberosum HOM05D007137 ORTHO05D008982 2.1e-59 232.6 165 68.5
Dinv39605 Davidia involucrata HOM05D007137 ORTHO05D008982 3.5e-59 231.9 165 69.1
EL10Ac3g07093 Beta vulgaris HOM05D007137 ORTHO05D008982 4.6e-59 231.5 161 67.1
Gohir.A09G122000 Gossypium hirsutum HOM05D007137 ORTHO05D008982 7.9e-59 230.7 160 67.5
PGR004G0226 Punica granatum HOM05D007137 ORTHO05D008982 7.9e-59 230.7 160 63.8
Duzib093G1775 Durio zibethinus HOM05D007137 ORTHO05D008982 1.3e-58 229.9 164 65.2
SGA_v2.0_scaffold105G30410 Striga asiatica HOM05D007137 ORTHO05D008982 1.3e-58 229.9 160 66.9
Peaxi162Scf00130g00019 Petunia axillaris HOM05D007137 ORTHO05D008982 1.8e-58 229.6 165 67.3
Ciclev10005859m.g Citrus clementina HOM05D007137 ORTHO05D008982 2.3e-58 229.2 164 67.1
Gohir.D09G118100 Gossypium hirsutum HOM05D007137 ORTHO05D008982 2.3e-58 229.2 160 67.5
Gorai.006G136400 Gossypium raimondii HOM05D007137 ORTHO05D008982 2.3e-58 229.2 160 67.5
Hund24707 Selenicereus undatus HOM05D007137 ORTHO05D008982 3.0e-58 228.8 164 65.9
TWI74G1615 Tripterygium wilfordii HOM05D007137 ORTHO05D008982 3.0e-58 228.8 165 66.1
Thecc.05G153200 Theobroma cacao HOM05D007137 ORTHO05D008982 3.9e-58 228.4 164 66.5
CANSAT80G0539 Cannabis sativa HOM05D007137 ORTHO05D008982 8.7e-58 227.3 165 67.3
Sabra06G0036100 Salix brachista HOM05D007137 ORTHO05D008982 8.7e-58 227.3 163 65.6
Cfa016812 Carpinus fangiana HOM05D007137 ORTHO05D008982 1.1e-57 226.9 161 67.1
Nitab4.5_0010636g0030 Nicotiana tabacum HOM05D007137 ORTHO05D008982 1.1e-57 226.9 163 66.9
FAN09G1348 Fragaria x ananassa HOM05D007137 ORTHO05D008982 1.5e-57 226.5 164 65.9
TAR369G0818 Trochodendron aralioides HOM05D007137 ORTHO05D008982 1.9e-57 226.1 165 64.2
HanXRQChr15g0491151 Helianthus annuus HOM05D007137 ORTHO05D008982 2.5e-57 225.7 164 66.5
Phvul.007G252600 Phaseolus vulgaris HOM05D007137 ORTHO05D008982 2.5e-57 225.7 164 66.5
Aa31LG1G23770 Aethionema arabicum HOM05D007137 ORTHO05D008982 4.3e-57 224.9 165 63.0
CANSAT80G1960 Cannabis sativa HOM05D007137 ORTHO05D008982 4.3e-57 224.9 165 66.7
ECA247G4023 Erigeron canadensis HOM05D007137 ORTHO05D008982 4.3e-57 224.9 163 65.6
Sc13g0001720 Simmondsia chinensis HOM05D007137 ORTHO05D008982 5.7e-57 224.6 162 65.4
Solyc04g015760.4 Solanum lycopersicum HOM05D007137 ORTHO05D008982 5.7e-57 224.6 165 66.7
FAN05G2215 Fragaria x ananassa HOM05D007137 ORTHO05D008982 7.4e-57 224.2 164 65.9
Hma1.2p1_2002F.1_g310780 Hydrangea macrophylla HOM05D007137 ORTHO05D008982 7.4e-57 224.2 164 64.6
Lj5g0009390 Lotus japonicus HOM05D007137 ORTHO05D008982 7.4e-57 224.2 164 67.1
Rhsim03G0024600 Rhododendron simsii HOM05D007137 ORTHO05D008982 7.4e-57 224.2 162 66.7
RcHm_v2.0_Chr3g0482531 Rosa chinensis HOM05D007137 ORTHO05D008982 9.6e-57 223.8 164 65.9
TPR.G10636 Trifolium pratense HOM05D007137 ORTHO05D008982 9.6e-57 223.8 164 66.5
CiPaw.09G038400 Carya illinoinensis HOM05D007137 ORTHO05D008982 1.3e-56 223.4 161 65.8
Prupe.7G059700 Prunus persica HOM05D007137 ORTHO05D008982 1.3e-56 223.4 163 65.6
QL07p000577 Quercus lobata HOM05D007137 ORTHO05D008982 1.3e-56 223.4 160 68.8
Lsat_1_v5_gn_9_29000 Lactuca sativa HOM05D007137 ORTHO05D008982 2.1e-56 222.6 163 64.4
Nitab4.5_0005195g0030 Nicotiana tabacum HOM05D007137 ORTHO05D008982 2.1e-56 222.6 163 66.9
Sopen04g007840 Solanum pennellii HOM05D007137 ORTHO05D008982 2.8e-56 222.2 165 66.1
FvH4_6g23850 Fragaria vesca HOM05D007137 ORTHO05D008982 3.7e-56 221.9 164 64.0
Glyma.10G097900 Glycine max HOM05D007137 ORTHO05D008982 4.8e-56 221.5 164 65.2
AT2G41760 Arabidopsis thaliana HOM05D007137 ORTHO05D008982 1.4e-55 219.9 163 62.0
CARHR136840 Cardamine hirsuta HOM05D007137 ORTHO05D008982 1.4e-55 219.9 163 61.3
Cc06_g17570 Coffea canephora HOM05D007137 ORTHO05D008982 1.4e-55 219.9 166 63.9
Lalb_Chr21g0316491 Lupinus albus HOM05D007137 ORTHO05D008982 4.1e-55 218.4 168 62.5
GSVIVG01033260001 Vitis vinifera HOM05D007137 ORTHO05D008982 4.1e-55 218.4 164 62.2
arahy.Tifrunner.gnm1.ann1.QC7DP1 Arachis hypogaea HOM05D007137 ORTHO05D008982 5.3e-55 218.0 162 63.6
THA.LOC104818226 Tarenaya hassleriana HOM05D007137 ORTHO05D008982 9.0e-55 217.2 163 60.7
arahy.Tifrunner.gnm1.ann1.F03MXT Arachis hypogaea HOM05D007137 ORTHO05D008982 1.2e-54 216.9 162 63.0
AL4G40070 Arabidopsis lyrata HOM05D007137 ORTHO05D008982 1.5e-54 216.5 163 60.7
Thhalv10017217m.g Eutrema salsugineum HOM05D007137 ORTHO05D008982 1.5e-54 216.5 160 61.9
Ca_26019_v3 Cicer arietinum L. HOM05D007137 ORTHO05D008982 2.0e-54 216.1 165 65.5
CAN.G676.70 Capsicum annuum HOM05D007137 ORTHO05D008982 3.4e-54 215.3 165 64.2
Sp4g24030 Schrenkiella parvula HOM05D007137 ORTHO05D008982 3.4e-54 215.3 160 62.5
CAN.G1456.1 Capsicum annuum HOM05D007137 ORTHO05D008982 4.5e-54 214.9 164 64.0
Oeu008913.1 Olea europaea HOM05D007137 ORTHO05D008982 7.6e-54 214.2 150 68.0
Oeu008915.1 Olea europaea HOM05D007137 ORTHO05D008982 7.6e-54 214.2 150 68.0
C03p27930 Brassica napus HOM05D007137 ORTHO05D008982 1.7e-53 213.0 162 59.9
BolC3t15165H Brassica oleracea HOM05D007137 ORTHO05D008982 1.7e-53 213.0 162 59.9
MD12G1074200 Malus domestica HOM05D007137 ORTHO05D008982 2.2e-53 212.6 163 64.4
Medtr7g034355 Medicago truncatula HOM05D007137 ORTHO05D008982 2.2e-53 212.6 163 63.2
vmacro07849 Vaccinium macrocarpon HOM05D007137 ORTHO05D008982 3.8e-53 211.8 161 65.8
BraA03t11558Z Brassica rapa HOM05D007137 ORTHO05D008982 5.0e-53 211.5 162 59.9
A03p23410 Brassica napus HOM05D007137 ORTHO05D008982 6.5e-53 211.1 162 59.9
Carub.0004s2404 Capsella rubella HOM05D007137 ORTHO05D008982 6.5e-53 211.1 163 58.3
Haze_19852 Corylus avellana HOM05D007137 ORTHO05D008982 8.4e-53 210.7 163 62.6
Eucgr.A02346 Eucalyptus grandis HOM05D007137 ORTHO05D008982 8.4e-53 210.7 160 62.5
Nn2g15218 Nelumbo nucifera HOM05D007137 ORTHO05D008982 8.4e-53 210.7 165 60.0
Atru.BG.154.p Acer truncatum HOM05D007137 ORTHO05D008982 1.9e-52 209.5 163 63.2
Ah.04g151610 Amaranthus hybridus HOM05D000942 ORTHO05D000918 4.6e-51 204.9 148 62.8
CsaV3_3G039290 Cucumis sativus L. HOM05D007137 ORTHO05D008982 6.7e-50 201.1 161 60.9
Sed0021909 Sechium edule HOM05D007137 ORTHO05D008982 6.7e-50 201.1 161 60.9
PSO384G0937 Papaver somniferum HOM05D007137 ORTHO05D008982 7.4e-49 197.6 162 58.0
MELO3C009672.2 Cucumis melo HOM05D007137 ORTHO05D008982 2.8e-48 195.7 161 59.0
Aqoxy1G00329 Aquilegia oxysepala HOM05D007137 ORTHO05D008982 1.1e-47 193.7 164 57.3
SalBow6G6768 Salvia bowleyana HOM05D007137 ORTHO05D008982 2.1e-43 179.5 133 65.4
MBI17_g01631_MAGBIO Magnolia biondii HOM05D007137 ORTHO05D008982 4.6e-43 178.3 160 55.6
Manes.09G022100 Manihot esculenta HOM05D007137 ORTHO05D008982 7.9e-43 177.6 137 64.2
Os05g0387900 Oryza sativa ssp. japonica HOM05D007137 ORTHO05D008982 7.9e-43 177.6 164 54.9
HPP92_001018 Vanilla planifolia HOM05D007137 ORTHO05D008982 2.2e-40 169.5 162 51.9
Pp3c8_16370 Physcomitrium patens HOM05D007137 ORTHO05D008982 1.2e-38 163.7 161 48.4
Psat6g120120 Pisum sativum HOM05D007137 ORTHO05D008982 1.2e-38 163.7 112 69.6
CSS0041211 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 7.7e-38 161.0 122 63.9
ATR0320G015 Amborella trichopoda HOM05D007137 ORTHO05D008982 5.0e-37 158.3 161 48.4
ClCG10G017100 Citrullus lanatus HOM05D007137 ORTHO05D008982 5.1e-34 148.3 161 51.6
SMO353G0157 Selaginella moellendorffii HOM05D007137 ORTHO05D008982 8.8e-34 147.5 162 42.6
CDE02G1742 Ceratophyllum demersum HOM05D007137 ORTHO05D008982 9.7e-33 144.1 122 51.6
Mapoly0062s0037 Marchantia polymorpha HOM05D007137 ORTHO05D008982 9.7e-33 144.1 162 45.1
SMO302G0006 Selaginella moellendorffii HOM05D007137 ORTHO05D008982 1.3e-32 143.7 164 40.9
FAN02G0118 Fragaria x ananassa HOM05D007137 ORTHO05D008982 2.2e-32 142.9 96 72.9
Rhsim03G0024200 Rhododendron simsii HOM05D007137 ORTHO05D008982 2.6e-30 136.0 159 46.5
VMungo0720G0821 Vigna mungo HOM05D007137 ORTHO05D008982 3.3e-25 119.0 92 63.0
Hma1.2p1_2520F.1_g323835 Hydrangea macrophylla HOM05D007137 ORTHO05D008982 2.2e-24 116.3 71 71.8
CSS0024811 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 1.1e-23 114.0 102 57.8
CBR_g39180 Chara braunii HOM05D007137 ORTHO05D008982 9.8e-17 90.9 97 42.3
SEGI_00420 Sequoiadendron giganteum HOM05D007137 ORTHO05D008982 9.8e-17 90.9 86 51.2
Cre04.g217912 Chlamydomonas reinhardtii HOM05D007137 ORTHO05D008982 8.0e-11 71.2 103 37.9
Rhsim03G0024500 Rhododendron simsii HOM05D007137 ORTHO05D008982 8.8e-10 67.8 63 54.0


User provided reference genes

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