Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_020485 Daucus carota HOM05D002914 ORTHO05D003196 7.6e-45 183.7 111 100.0
CSS0032433 Camellia sinensis var. sinensis HOM05D002914 ORTHO05D003196 5.3e-22 107.8 122 51.6
Dinv18053 Davidia involucrata HOM05D002914 ORTHO05D003196 3.4e-21 105.1 109 55.0
Oeu000823.1 Olea europaea HOM05D002914 ORTHO05D003196 5.8e-21 104.4 98 53.1
TAR623G0040 Trochodendron aralioides HOM05D002914 ORTHO05D003196 3.8e-20 101.7 108 51.9
SGA_v2.0_scaffold105G30420 Striga asiatica HOM05D002914 ORTHO05D003196 4.2e-19 98.2 101 56.4
Actinidia17240 Actinidia chinensis HOM05D002914 ORTHO05D003196 2.1e-18 95.9 110 61.8
Prupe.7G063700 Prunus persica HOM05D002914 ORTHO05D003196 3.5e-18 95.1 101 55.4
Aqoxy2G00187 Aquilegia oxysepala HOM05D002914 ORTHO05D003196 6.0e-18 94.4 108 46.3
Phvul.001G135000 Phaseolus vulgaris HOM05D002914 ORTHO05D003196 7.9e-18 94.0 101 52.5
Thecc.05G158000 Theobroma cacao HOM05D002914 ORTHO05D003196 7.9e-18 94.0 99 51.5
COL.COLO4_28237 Corchorus olitorius HOM05D002914 ORTHO05D003196 1.3e-17 93.2 98 51.0
Duzib093G1261 Durio zibethinus HOM05D002914 ORTHO05D003196 1.3e-17 93.2 106 49.1
Peaxi162Scf00493g00035 Petunia axillaris HOM05D002914 ORTHO05D003196 1.3e-17 93.2 84 57.1
CANSAT80G1635 Cannabis sativa HOM05D002914 ORTHO05D003196 1.8e-17 92.8 110 45.5
Hma1.2p1_1847F.1_g305210 Hydrangea macrophylla HOM05D002914 ORTHO05D003196 2.3e-17 92.4 90 54.4
Glyma.19G140500 Glycine max HOM05D002914 ORTHO05D003196 3.0e-17 92.0 83 56.6
VMungo1383G1568 Vigna mungo HOM05D002914 ORTHO05D003196 3.0e-17 92.0 83 56.6
Gohir.A09G123100 Gossypium hirsutum HOM05D002914 ORTHO05D003196 3.9e-17 91.7 103 50.5
Gohir.D09G120100 Gossypium hirsutum HOM05D002914 ORTHO05D003196 3.9e-17 91.7 103 50.5
Gorai.006G137500 Gossypium raimondii HOM05D002914 ORTHO05D003196 3.9e-17 91.7 103 50.5
Ciclev10006230m.g Citrus clementina HOM05D002914 ORTHO05D003196 5.1e-17 91.3 99 52.5
CiPaw.09G037100 Carya illinoinensis HOM05D002914 ORTHO05D003196 6.7e-17 90.9 97 54.6
Manes.09G023600 Manihot esculenta HOM05D002914 ORTHO05D003196 6.7e-17 90.9 109 48.6
Nitab4.5_0005892g0010 Nicotiana tabacum HOM05D002914 ORTHO05D003196 8.7e-17 90.5 85 54.1
Medtr7g091830 Medicago truncatula HOM05D002914 ORTHO05D003196 1.5e-16 89.7 83 55.4
Lalb_Chr20g0110761 Lupinus albus HOM05D002914 ORTHO05D003196 1.9e-16 89.4 104 47.1
QL07p000101 Quercus lobata HOM05D002914 ORTHO05D003196 3.3e-16 88.6 104 50.0
Atru.chr1.1072 Acer truncatum HOM05D002914 ORTHO05D003196 4.3e-16 88.2 103 48.5
Manes.08G049900 Manihot esculenta HOM05D002914 ORTHO05D003196 9.7e-16 87.0 89 47.2
Psat3g072240 Pisum sativum HOM05D002914 ORTHO05D003196 9.7e-16 87.0 83 50.6
TPR.G27766 Trifolium pratense HOM05D002914 ORTHO05D003196 1.6e-15 86.3 83 51.8
MBI02_g05666_MAGBIO Magnolia biondii HOM05D002914 ORTHO05D003196 2.2e-15 85.9 100 61.0
Sopen04g007610 Solanum pennellii HOM05D002914 ORTHO05D003196 2.2e-15 85.9 66 57.6
A04p03090 Brassica napus HOM05D002914 ORTHO05D003196 2.8e-15 85.5 84 53.6
BraA04t16032Z Brassica rapa HOM05D002914 ORTHO05D003196 2.8e-15 85.5 84 53.6
MD14G1070500 Malus domestica HOM05D002914 ORTHO05D003196 4.8e-15 84.7 108 52.8
Ah.04g151670 Amaranthus hybridus HOM05D002914 ORTHO05D003196 6.3e-15 84.3 83 49.4
AT3G57500 Arabidopsis thaliana HOM05D002914 ORTHO05D003196 6.3e-15 84.3 113 43.4
Ca_08467_v3 Cicer arietinum L. HOM05D002914 ORTHO05D003196 6.3e-15 84.3 93 48.4
Potri.006G052500 Populus trichocarpa HOM05D002914 ORTHO05D003196 6.3e-15 84.3 107 48.6
BcaB02g08314 Brassica carinata HOM05D002914 ORTHO05D003196 8.2e-15 84.0 84 50.0
Nn2g15303 Nelumbo nucifera HOM05D002914 ORTHO05D003196 8.2e-15 84.0 97 51.5
Solyc04g015540.1 Solanum lycopersicum HOM05D002914 ORTHO05D003196 1.1e-14 83.6 78 52.6
Cpa.g.sc92.38 Carica papaya HOM05D002914 ORTHO05D003196 1.4e-14 83.2 98 50.0
Nn7g36239 Nelumbo nucifera HOM05D002914 ORTHO05D003196 1.4e-14 83.2 116 47.4
TWI74G1608 Tripterygium wilfordii HOM05D002914 ORTHO05D003196 1.4e-14 83.2 62 59.7
AL5G39080 Arabidopsis lyrata HOM05D002914 ORTHO05D003196 1.8e-14 82.8 127 40.9
Cfa016832 Carpinus fangiana HOM05D002914 ORTHO05D003196 1.8e-14 82.8 96 52.1
BcaC07g40375 Brassica carinata HOM05D002914 ORTHO05D003196 2.4e-14 82.4 114 43.0
Migut.J01766 Erythranthe guttata HOM05D002914 ORTHO05D003196 2.4e-14 82.4 112 58.0
RcHm_v2.0_Chr3g0481701 Rosa chinensis HOM05D002914 ORTHO05D003196 2.4e-14 82.4 79 55.7
PGSC0003DMG400027270 Solanum tuberosum HOM05D002914 ORTHO05D003196 2.4e-14 82.4 66 54.5
ECA247G2219 Erigeron canadensis HOM05D000031 ORTHO05D000003 3.1e-14 82.0 99 56.6
Thhalv10006376m.g Eutrema salsugineum HOM05D002914 ORTHO05D003196 3.1e-14 82.0 99 46.5
Sc13g0001830 Simmondsia chinensis HOM05D002914 ORTHO05D003196 3.1e-14 82.0 110 48.2
Carub.0005s2434 Capsella rubella HOM05D002914 ORTHO05D003196 4.1e-14 81.6 82 51.2
FvH4_6g23590 Fragaria vesca HOM05D002914 ORTHO05D003196 4.1e-14 81.6 119 50.4
A09p50360 Brassica napus HOM05D002914 ORTHO05D003196 5.3e-14 81.3 99 44.4
BraA09t40488Z Brassica rapa HOM05D002914 ORTHO05D003196 5.3e-14 81.3 99 44.4
C08p33030 Brassica napus HOM05D002914 ORTHO05D003196 6.9e-14 80.9 99 44.4
BolC8t50903H Brassica oleracea HOM05D002914 ORTHO05D003196 6.9e-14 80.9 99 44.4
FAN09G0984 Fragaria x ananassa HOM05D002914 ORTHO05D003196 6.9e-14 80.9 119 49.6
Sp5g05100 Schrenkiella parvula HOM05D002914 ORTHO05D003196 6.9e-14 80.9 108 44.4
EL10Ac3g07073 Beta vulgaris HOM05D002914 ORTHO05D003196 1.2e-13 80.1 102 44.1
Lsat_1_v5_gn_9_28661 Lactuca sativa HOM05D002914 ORTHO05D003196 1.5e-13 79.7 86 47.7
BcaB02g07599 Brassica carinata HOM05D002914 ORTHO05D003196 3.4e-13 78.6 109 42.2
Lsat_1_v5_gn_5_161660 Lactuca sativa HOM05D002914 ORTHO05D003196 3.4e-13 78.6 87 44.8
Duzib128G0409 Durio zibethinus HOM05D002914 ORTHO05D003196 7.6e-13 77.4 107 43.9
Gorai.002G147700 Gossypium raimondii HOM05D002914 ORTHO05D003196 1.0e-12 77.0 82 50.0
Gohir.D01G121050 Gossypium hirsutum HOM05D002914 ORTHO05D003196 3.8e-12 75.1 82 48.8
ATR0332G006 Amborella trichopoda HOM05D002914 ORTHO05D003196 5.0e-12 74.7 65 50.8
BcaC02g09941 Brassica carinata HOM05D002914 ORTHO05D003196 5.0e-12 74.7 82 50.0
C04p34950 Brassica napus HOM05D002914 ORTHO05D003196 5.0e-12 74.7 82 50.0
BolC4t25049H Brassica oleracea HOM05D002914 ORTHO05D003196 5.0e-12 74.7 82 50.0
HanXRQChr10g0300121 Helianthus annuus HOM05D002914 ORTHO05D003196 5.0e-12 74.7 92 47.8
Gohir.A01G132111 Gossypium hirsutum HOM05D002914 ORTHO05D003196 6.5e-12 74.3 82 47.6
Lj1g0015891 Lotus japonicus HOM05D002914 ORTHO05D003196 8.5e-12 73.9 92 46.7
BcaC08g44849 Brassica carinata HOM05D002914 ORTHO05D003196 1.1e-11 73.6 82 47.6
HPP92_023573 Vanilla planifolia HOM05D002914 ORTHO05D003196 3.2e-11 72.0 79 57.0
CARHR167710 Cardamine hirsuta HOM05D002914 ORTHO05D003196 7.2e-11 70.9 78 47.4
A07p23450 Brassica napus HOM05D002914 ORTHO05D003196 9.4e-11 70.5 68 51.5
THA.LOC104802149 Tarenaya hassleriana HOM05D002914 ORTHO05D003196 1.2e-10 70.1 79 49.4
MBI04_g44434_MAGBIO Magnolia biondii HOM05D002914 ORTHO05D003196 6.1e-10 67.8 48 62.5
Os03g0696150 Oryza sativa ssp. japonica HOM05D002914 ORTHO05D003196 1.0e-09 67.0 77 41.6
Migut.K00083 Erythranthe guttata HOM05D002914 ORTHO05D003196 1.5e-08 63.2 95 43.2
arahy.Tifrunner.gnm1.ann1.TRJ4SS Arachis hypogaea HOM05D002914 ORTHO05D003196 5.7e-08 61.2 33 75.8
Atru.ctg24.30 Acer truncatum HOM05D002914 ORTHO05D003196 7.4e-08 60.8 39 66.7
Sabra06G0036900 Salix brachista HOM05D002914 ORTHO05D003196 1.3e-07 60.1 77 48.1
Dinv42126 Davidia involucrata HOM05D002914 ORTHO05D003196 2.8e-07 58.9 91 35.2
Thecc.08G014700 Theobroma cacao HOM05D002914 ORTHO05D003196 6.3e-07 57.8 91 35.2
AUR62024432 Chenopodium quinoa HOM05D002914 ORTHO05D003196 8.2e-07 57.4 79 43.0
Gorai.005G104900 Gossypium raimondii HOM05D002914 ORTHO05D003196 2.4e-06 55.8 80 38.8
Zm00001eb216960 Zea mays HOM05D002914 ORTHO05D003196 2.4e-06 55.8 76 52.6
Aqoxy5G01394 Aquilegia oxysepala HOM05D002914 ORTHO05D003196 3.1e-06 55.5 94 30.9
Hma1.2p1_0584F.1_g183120 Hydrangea macrophylla HOM05D002914 ORTHO05D003196 4.1e-06 55.1 92 34.8
ClCG04G003270 Citrullus lanatus HOM05D002914 ORTHO05D003196 5.3e-06 54.7 97 42.3
Gohir.D02G092940 Gossypium hirsutum HOM05D002914 ORTHO05D003196 5.3e-06 54.7 82 37.8
SEGI_00607 Sequoiadendron giganteum HOM05D002914 ORTHO05D003196 5.3e-06 54.7 37 56.8


User provided reference genes

Program Settings