Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_020462 Daucus carota HOM05D007036 ORTHO05D008885 3.2e-169 598.6 355 100.0
Lj5P749T15 Lonicera japonica HOM05D007036 ORTHO05D008885 2.6e-115 419.5 355 60.0
Rhsim01G0110100 Rhododendron simsii HOM05D007036 ORTHO05D008885 7.1e-113 411.4 355 59.7
vmacro22700 Vaccinium macrocarpon HOM05D007036 ORTHO05D008885 3.5e-112 409.1 355 60.0
Haze_19103 Corylus avellana HOM05D007036 ORTHO05D008885 8.7e-111 404.4 355 58.6
RcHm_v2.0_Chr4g0397671 Rosa chinensis HOM05D007036 ORTHO05D008885 1.9e-110 403.3 355 57.5
Sabra18G0121200 Salix brachista HOM05D007036 ORTHO05D008885 5.7e-110 401.7 355 56.9
Cfa020750 Carpinus fangiana HOM05D007036 ORTHO05D008885 9.7e-110 401.0 355 58.3
FAN12G1049 Fragaria x ananassa HOM05D007036 ORTHO05D008885 9.7e-110 401.0 355 57.5
FAN17G1483 Fragaria x ananassa HOM05D007036 ORTHO05D008885 3.7e-109 399.1 355 56.9
Aqoxy7G02614 Aquilegia oxysepala HOM05D007036 ORTHO05D008885 1.2e-107 394.0 355 56.1
Sabra18G0128300 Salix brachista HOM05D007036 ORTHO05D008885 1.5e-107 393.7 355 56.1
Atru.chr7.958 Acer truncatum HOM05D007036 ORTHO05D008885 2.9e-106 389.4 354 55.6
Ciclev10010414m.g Citrus clementina HOM05D007036 ORTHO05D008885 5.0e-106 388.7 354 55.4
CSS0020574 Camellia sinensis var. sinensis HOM05D007036 ORTHO05D008885 2.5e-105 386.3 327 60.6
PGSC0003DMG400013697 Solanum tuberosum HOM05D007036 ORTHO05D008885 4.2e-105 385.6 355 56.1
HanXRQChr09g0261951 Helianthus annuus HOM05D007036 ORTHO05D008885 5.5e-105 385.2 354 55.4
TWI34G0744 Tripterygium wilfordii HOM05D007036 ORTHO05D008885 3.6e-104 382.5 355 53.8
Peaxi162Scf00954g00025 Petunia axillaris HOM05D007036 ORTHO05D008885 1.0e-103 380.9 355 55.5
ClCG11G011370 Citrullus lanatus HOM05D007036 ORTHO05D008885 5.1e-103 378.6 355 54.6
MELO3C003928.2 Cucumis melo HOM05D007036 ORTHO05D008885 4.3e-102 375.6 355 54.6
Sopen05g027850 Solanum pennellii HOM05D007036 ORTHO05D008885 5.7e-102 375.2 344 56.4
CsaV3_2G009100 Cucumis sativus L. HOM05D007036 ORTHO05D008885 1.7e-101 373.6 355 54.1
CAN.G106.6 Capsicum annuum HOM05D007036 ORTHO05D008885 2.8e-101 372.9 355 54.6
Duzib168G0358 Durio zibethinus HOM05D007036 ORTHO05D008885 2.8e-101 372.9 356 54.2
Oeu011819.1 Olea europaea HOM05D007036 ORTHO05D008885 8.2e-101 371.3 355 54.1
Gohir.D06G112000 Gossypium hirsutum HOM05D007036 ORTHO05D008885 1.1e-100 370.9 356 52.2
Gorai.010G127600 Gossypium raimondii HOM05D007036 ORTHO05D008885 1.4e-100 370.5 356 52.2
Gohir.A06G110000 Gossypium hirsutum HOM05D007036 ORTHO05D008885 3.1e-100 369.4 356 52.0
Nitab4.5_0000404g0190 Nicotiana tabacum HOM05D007036 ORTHO05D008885 4.1e-100 369.0 352 55.1
Lj2g0012301 Lotus japonicus HOM05D007036 ORTHO05D008885 2.6e-99 366.3 345 51.6
Potri.018G146900 Populus trichocarpa HOM05D007036 ORTHO05D008885 3.4e-99 365.9 355 53.5
Sed0028219 Sechium edule HOM05D007036 ORTHO05D008885 2.9e-98 362.8 355 52.4
TAR636G0074 Trochodendron aralioides HOM05D007036 ORTHO05D008885 5.0e-98 362.1 355 53.0
Glyma.03G035400 Glycine max HOM05D007036 ORTHO05D008885 8.5e-98 361.3 355 49.9
Lalb_Chr19g0129471 Lupinus albus HOM05D007036 ORTHO05D008885 2.7e-96 356.3 333 53.2
Thecc.09G196200 Theobroma cacao HOM05D007036 ORTHO05D008885 2.7e-96 356.3 356 53.1
CANSAT80G2763 Cannabis sativa HOM05D007036 ORTHO05D008885 4.7e-96 355.5 336 52.1
Lsat_1_v5_gn_6_31220 Lactuca sativa HOM05D007036 ORTHO05D008885 7.9e-96 354.8 337 54.6
Phvul.010G069800 Phaseolus vulgaris HOM05D007036 ORTHO05D008885 8.8e-95 351.3 341 49.6
Phvul.011G085400 Phaseolus vulgaris HOM05D007036 ORTHO05D008885 8.8e-95 351.3 341 49.6
FAN07G1271 Fragaria x ananassa HOM05D007036 ORTHO05D008885 2.0e-94 350.1 334 55.1
Migut.J00838 Erythranthe guttata HOM05D007036 ORTHO05D008885 2.6e-94 349.7 346 52.3
MD11G1028400 Malus domestica HOM05D007036 ORTHO05D008885 3.3e-94 349.4 356 52.0
Aa31LG4G9890 Aethionema arabicum HOM05D007036 ORTHO05D008885 7.4e-94 348.2 355 49.6
Glyma.01G132800 Glycine max HOM05D007036 ORTHO05D008885 2.8e-93 346.3 355 48.2
QL11p008742 Quercus lobata HOM05D007036 ORTHO05D008885 8.2e-93 344.7 354 58.5
ECA236G1169 Erigeron canadensis HOM05D007036 ORTHO05D008885 1.1e-92 344.4 336 52.7
AUR62029463 Chenopodium quinoa HOM05D007036 ORTHO05D008885 4.1e-92 342.4 313 54.0
BcaB01g00982 Brassica carinata HOM05D007036 ORTHO05D008885 5.3e-92 342.0 355 49.3
Sp5g14950 Schrenkiella parvula HOM05D007036 ORTHO05D008885 5.3e-92 342.0 355 49.0
TPR.G36679 Trifolium pratense HOM05D007036 ORTHO05D008885 9.1e-92 341.3 336 51.2
arahy.Tifrunner.gnm1.ann1.UBG147 Arachis hypogaea HOM05D007036 ORTHO05D008885 2.0e-91 340.1 334 50.0
GSVIVG01032259001 Vitis vinifera HOM05D007036 ORTHO05D008885 2.0e-91 340.1 355 58.0
arahy.Tifrunner.gnm1.ann1.1YAE55 Arachis hypogaea HOM05D007036 ORTHO05D008885 2.6e-91 339.7 334 49.7
AL5G20840 Arabidopsis lyrata HOM05D007036 ORTHO05D008885 3.5e-91 339.3 355 48.5
A06p20770 Brassica napus HOM05D007036 ORTHO05D008885 5.9e-91 338.6 355 48.2
AT3G42630 Arabidopsis thaliana HOM05D007036 ORTHO05D008885 1.7e-90 337.0 355 48.2
C03p70950 Brassica napus HOM05D007036 ORTHO05D008885 3.8e-90 335.9 355 48.2
BcaC01g01887 Brassica carinata HOM05D007036 ORTHO05D008885 5.0e-90 335.5 355 48.2
BolC3t19373H Brassica oleracea HOM05D007036 ORTHO05D008885 5.0e-90 335.5 355 48.2
Prupe.1G064400 Prunus persica HOM05D007036 ORTHO05D008885 5.0e-90 335.5 355 55.8
Carub.0001s3409 Capsella rubella HOM05D007036 ORTHO05D008885 6.5e-90 335.1 355 48.5
MSTRG.5959 Avicennia marina HOM05D007036 ORTHO05D008885 1.1e-89 334.3 312 55.1
BraA06t25155Z Brassica rapa HOM05D007036 ORTHO05D008885 1.1e-89 334.3 355 48.2
FvH4_4g06090 Fragaria vesca HOM05D007036 ORTHO05D008885 1.5e-89 334.0 299 56.5
Medtr0004s0610 Medicago truncatula HOM05D007036 ORTHO05D008885 1.9e-89 333.6 331 50.8
CSS0014683 Camellia sinensis var. sinensis HOM05D007036 ORTHO05D008885 3.2e-89 332.8 286 60.1
Cc00_g00150 Coffea canephora HOM05D007036 ORTHO05D008885 7.2e-89 331.6 353 50.4
MBI13_g34303_MAGBIO Magnolia biondii HOM05D007036 ORTHO05D008885 9.4e-89 331.3 355 58.0
Nn5g27062 Nelumbo nucifera HOM05D007036 ORTHO05D008885 2.7e-88 329.7 355 55.2
Psat1g099640 Pisum sativum HOM05D007036 ORTHO05D008885 2.7e-88 329.7 336 50.0
Medtr1g051205 Medicago truncatula HOM05D007036 ORTHO05D008885 3.6e-88 329.3 324 50.6
VMungo0331G1618 Vigna mungo HOM05D007036 ORTHO05D008885 1.0e-87 327.8 318 49.4
unitig_26.g9126 Utricularia gibba HOM05D007036 ORTHO05D008885 1.4e-87 327.4 341 50.4
Sc16g0002180 Simmondsia chinensis HOM05D007036 ORTHO05D008885 2.3e-87 326.6 352 55.1
Ah.07g208320 Amaranthus hybridus HOM05D007036 ORTHO05D008885 5.2e-87 325.5 318 51.9
PGR083G2517 Punica granatum HOM05D007036 ORTHO05D008885 6.7e-87 325.1 336 49.1
CiPaw.16G103900 Carya illinoinensis HOM05D007036 ORTHO05D008885 8.8e-87 324.7 355 63.4
HPP92_028312 Vanilla planifolia HOM05D007036 ORTHO05D008885 1.1e-86 324.3 342 59.4
PSO170G3146 Papaver somniferum HOM05D007036 ORTHO05D008885 1.5e-86 323.9 354 61.6
SGA_v2.0_scaffold318G48469 Striga asiatica HOM05D007036 ORTHO05D008885 2.0e-86 323.6 342 49.1
Manes.01G260400 Manihot esculenta HOM05D007036 ORTHO05D008885 1.7e-85 320.5 355 50.7
CSS0018855 Camellia sinensis var. sinensis HOM05D007036 ORTHO05D008885 3.7e-85 319.3 327 53.5
Carub.0016s0003 Capsella rubella HOM05D007036 ORTHO05D008885 4.1e-84 315.8 347 47.6
PSO063G5690 Papaver somniferum HOM05D007036 ORTHO05D008885 7.0e-84 315.1 296 70.3
CARHR153640 Cardamine hirsuta HOM05D007036 ORTHO05D008885 5.9e-83 312.0 355 43.9
Thhalv10003041m.g Eutrema salsugineum HOM05D007036 ORTHO05D008885 1.5e-81 307.4 355 46.2
MD13G1233100 Malus domestica HOM05D007036 ORTHO05D008885 2.5e-81 306.6 395 45.3
Cpa.g.sc115.26 Carica papaya HOM05D007036 ORTHO05D008885 4.2e-81 305.8 207 70.0
Medtr5g068170 Medicago truncatula HOM05D007036 ORTHO05D008885 5.5e-81 305.4 326 49.7
ATR0626G201 Amborella trichopoda HOM05D007036 ORTHO05D008885 3.0e-79 299.7 208 66.8
VMungo0540G1720 Vigna mungo HOM05D007036 ORTHO05D008885 1.5e-78 297.4 209 64.1
Ca_04679_v3 Cicer arietinum L. HOM05D007036 ORTHO05D008885 1.4e-71 274.2 188 67.6
Os08g0520200 Oryza sativa ssp. japonica HOM05D007036 ORTHO05D008885 6.8e-71 271.9 333 44.1
CDE02G1188 Ceratophyllum demersum HOM05D007036 ORTHO05D004232 2.4e-68 263.5 202 62.4
Zm00001eb035670 Zea mays HOM05D007036 ORTHO05D008885 4.1e-68 262.7 333 43.5
Eucgr.C00064 Eucalyptus grandis HOM05D007036 ORTHO05D008885 3.8e-66 256.1 209 57.9
SEGI_31150 Sequoiadendron giganteum HOM05D007036 ORTHO05D008885 2.3e-63 246.9 213 56.3
COL.COLO4_04221 Corchorus olitorius HOM05D007036 ORTHO05D008885 1.3e-61 241.1 333 42.0
CDE04G2486 Ceratophyllum demersum HOM05D007036 ORTHO05D008885 1.3e-58 231.1 291 42.6
COL.COLO4_06173 Corchorus olitorius HOM05D007036 ORTHO05D008885 2.0e-51 207.2 307 40.4
Oeu028822.1 Olea europaea HOM05D007036 ORTHO05D008885 2.3e-47 193.7 153 60.1
Mapoly0002s0203 Marchantia polymorpha HOM05D007036 ORTHO05D008885 1.7e-42 177.6 199 49.2
vmacro20769 Vaccinium macrocarpon HOM05D007036 ORTHO05D008885 1.7e-42 177.6 344 34.3
Dinv26474 Davidia involucrata HOM05D007036 ORTHO05D008885 2.1e-35 154.1 226 51.8
Lj5A765T51 Lonicera japonica HOM05D007036 ORTHO05D008885 3.9e-34 149.8 209 41.6
SMO347G0413 Selaginella moellendorffii HOM05D007036 ORTHO05D008885 6.6e-34 149.1 175 45.7
Pp3c4_3090 Physcomitrium patens HOM05D007036 ORTHO05D008885 4.3e-33 146.4 211 40.8
Pp3c3_31860 Physcomitrium patens HOM05D007036 ORTHO05D008885 2.0e-14 84.3 151 35.8
AagrBONN_evm.TU.Sc2ySwM_228.1431 Anthoceros agrestis HOM05D007036 ORTHO05D008885 9.9e-14 82.0 74 50.0
VMungo1383G3288 Vigna mungo HOM05D007897 ORTHO05D010061 4.2e-12 76.6 188 31.9
ATR0807G097 Amborella trichopoda HOM05D007897 ORTHO05D010061 5.5e-12 76.3 199 31.7
arahy.Tifrunner.gnm1.ann1.TEUF1S Arachis hypogaea HOM05D007897 ORTHO05D010061 3.5e-11 73.6 180 34.4
PSO063G5193 Papaver somniferum HOM05D007897 ORTHO05D010061 4.6e-11 73.2 199 31.7
arahy.Tifrunner.gnm1.ann1.T7EAWL Arachis hypogaea HOM05D007897 ORTHO05D010061 7.9e-11 72.4 180 33.9
TWI23G0094 Tripterygium wilfordii HOM05D007897 ORTHO05D010061 1.0e-10 72.0 201 29.4
PSO017G4232 Papaver somniferum HOM05D007897 ORTHO05D010061 2.3e-10 70.9 193 31.6
Nn8g41262 Nelumbo nucifera HOM05D007897 ORTHO05D010061 3.0e-10 70.5 197 29.9
CANSAT78G0179 Cannabis sativa HOM05D007897 ORTHO05D010061 5.1e-10 69.7 159 32.7
CSS0018651 Camellia sinensis var. sinensis HOM05D007897 ORTHO05D010061 6.7e-10 69.3 198 28.8
CSS0029276 Camellia sinensis var. sinensis HOM05D007897 ORTHO05D010061 6.7e-10 69.3 198 28.8
COL.COLO4_35959 Corchorus olitorius HOM05D007897 ORTHO05D010061 1.1e-09 68.6 194 28.4
Phvul.001G265200 Phaseolus vulgaris HOM05D007897 ORTHO05D010061 1.5e-09 68.2 187 30.5
Cc03_g09150 Coffea canephora HOM05D007897 ORTHO05D010061 1.9e-09 67.8 179 29.6
Lalb_Chr03g0036571 Lupinus albus HOM05D007897 ORTHO05D010061 2.5e-09 67.4 199 31.2
MBI07_g06195_MAGBIO Magnolia biondii HOM05D007897 ORTHO05D010061 3.3e-09 67.0 193 31.6
Manes.05G198900 Manihot esculenta HOM05D007897 ORTHO05D010061 3.3e-09 67.0 201 29.4
Oeu050722.1 Olea europaea HOM05D005839 ORTHO05D009229 7.4e-09 65.9 185 29.7
Sabra14G0112700 Salix brachista HOM05D007897 ORTHO05D010061 1.3e-08 65.1 185 27.6
Glyma.18G003400 Glycine max HOM05D007897 ORTHO05D010061 1.6e-08 64.7 151 33.1
Sed0009503 Sechium edule HOM05D007897 ORTHO05D010061 1.6e-08 64.7 195 27.7
Potri.014G149500 Populus trichocarpa HOM05D007897 ORTHO05D010061 3.7e-08 63.5 195 28.7
Oeu050723.3 Olea europaea HOM05D007897 ORTHO05D009229 8.1e-08 62.4 163 30.7
CiPaw.02G062400 Carya illinoinensis HOM05D007897 ORTHO05D010061 1.4e-07 61.6 186 29.0
Duzib212G0894 Durio zibethinus HOM05D007897 ORTHO05D010061 6.9e-07 59.3 161 29.2
MD04G1021700 Malus domestica HOM05D007897 ORTHO05D010061 3.4e-06 57.0 158 29.1


User provided reference genes

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