Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_020455 Daucus carota HOM05D006291 ORTHO05D007669 9.1e-54 213.4 113 100.0
Actinidia38532 Actinidia chinensis HOM05D006291 ORTHO05D007669 9.4e-43 176.8 103 91.3
Actinidia02463 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.0e-41 173.3 104 89.4
Nn8g40626 Nelumbo nucifera HOM05D006291 ORTHO05D007669 3.0e-41 171.8 103 88.3
Duzib128G1629 Durio zibethinus HOM05D006291 ORTHO05D007669 4.0e-41 171.4 103 89.3
Duzib128G2031 Durio zibethinus HOM05D006291 ORTHO05D007669 4.0e-41 171.4 103 89.3
Oeu028819.1 Olea europaea HOM05D006291 ORTHO05D007669 5.2e-41 171.0 104 88.5
SGA_v2.0_scaffold21G09601 Striga asiatica HOM05D006291 ORTHO05D007669 5.2e-41 171.0 104 84.6
Manes.02G198400 Manihot esculenta HOM05D006291 ORTHO05D007669 1.2e-40 169.9 103 87.4
Rhsim01G0107900 Rhododendron simsii HOM05D006291 ORTHO05D007669 1.2e-40 169.9 102 88.2
COL.COLO4_05650 Corchorus olitorius HOM05D006291 ORTHO05D007669 2.6e-40 168.7 104 87.5
GSVIVG01032270001 Vitis vinifera HOM05D006291 ORTHO05D007669 2.6e-40 168.7 103 88.3
CiPaw.16G104700 Carya illinoinensis HOM05D006291 ORTHO05D007669 4.4e-40 167.9 103 85.4
ECA234G1508 Erigeron canadensis HOM05D006291 ORTHO05D007669 4.4e-40 167.9 103 86.4
PGSC0003DMG400013569 Solanum tuberosum HOM05D006291 ORTHO05D007669 7.5e-40 167.2 103 85.4
MD16G1236600 Malus domestica HOM05D006291 ORTHO05D007669 9.8e-40 166.8 103 84.5
Potri.006G079700 Populus trichocarpa HOM05D006291 ORTHO05D007669 9.8e-40 166.8 103 85.4
Migut.L01922 Erythranthe guttata HOM05D006291 ORTHO05D007669 1.3e-39 166.4 104 83.7
HanXRQChr12g0358571 Helianthus annuus HOM05D006291 ORTHO05D007669 1.3e-39 166.4 103 85.4
MSTRG.10473 Avicennia marina HOM05D006291 ORTHO05D007669 1.7e-39 166.0 104 84.6
MD13G1231800 Malus domestica HOM05D006291 ORTHO05D007669 2.2e-39 165.6 103 84.5
Nitab4.5_0003139g0110 Nicotiana tabacum HOM05D006291 ORTHO05D007669 2.2e-39 165.6 103 83.5
CSS0003994 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 2.8e-39 165.2 104 86.5
CSS0013846 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 2.8e-39 165.2 104 86.5
Prupe.1G063000 Prunus persica HOM05D006291 ORTHO05D007669 4.8e-39 164.5 103 84.5
TAR362G0416 Trochodendron aralioides HOM05D006291 ORTHO05D007669 6.3e-39 164.1 103 83.5
EL10Ac2g03616 Beta vulgaris HOM05D006291 ORTHO05D007669 8.3e-39 163.7 103 84.5
CAN.G54.10 Capsicum annuum HOM05D006291 ORTHO05D007669 8.3e-39 163.7 103 82.5
PSO170G1648 Papaver somniferum HOM05D006291 ORTHO05D007669 8.3e-39 163.7 104 81.7
Solyc07g042620.4 Solanum lycopersicum HOM05D006291 ORTHO05D007669 8.3e-39 163.7 101 85.1
Sopen07g022310 Solanum pennellii HOM05D006291 ORTHO05D007669 8.3e-39 163.7 101 85.1
Gohir.D05G287200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 1.1e-38 163.3 104 83.7
Cc06_g23850 Coffea canephora HOM05D006291 ORTHO05D007669 1.4e-38 162.9 102 85.3
Peaxi162Scf00474g00519 Petunia axillaris HOM05D006291 ORTHO05D007669 1.4e-38 162.9 103 83.5
PSO063G7114 Papaver somniferum HOM05D006291 ORTHO05D007669 1.8e-38 162.5 104 80.8
Sc23g0004310 Simmondsia chinensis HOM05D006291 ORTHO05D007669 2.4e-38 162.2 104 83.7
HanXRQChr10g0309491 Helianthus annuus HOM05D006291 ORTHO05D007669 4.1e-38 161.4 102 85.3
Ciclev10009894m.g Citrus clementina HOM05D006291 ORTHO05D007669 5.4e-38 161.0 103 83.5
AUR62020734 Chenopodium quinoa HOM05D006291 ORTHO05D007669 7.0e-38 160.6 103 82.5
AUR62027977 Chenopodium quinoa HOM05D006291 ORTHO05D007669 7.0e-38 160.6 103 82.5
Sabra06G0060300 Salix brachista HOM05D006291 ORTHO05D007669 7.0e-38 160.6 103 83.5
CSS0029803 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 1.2e-37 159.8 110 81.8
RcHm_v2.0_Chr4g0397141 Rosa chinensis HOM05D006291 ORTHO05D007669 1.6e-37 159.5 103 80.6
Carub.0013s0004 Capsella rubella HOM05D006291 ORTHO05D007669 2.0e-37 159.1 104 81.7
THA.LOC104826574 Tarenaya hassleriana HOM05D006291 ORTHO05D007669 2.0e-37 159.1 104 82.7
Ah.10g032820 Amaranthus hybridus HOM05D006291 ORTHO05D007669 2.7e-37 158.7 103 79.6
ATR0580G035 Amborella trichopoda HOM05D006291 ORTHO05D007669 2.7e-37 158.7 101 80.2
Potri.018G149200 Populus trichocarpa HOM05D006291 ORTHO05D007669 2.7e-37 158.7 103 81.6
unitig_8.g3543 Utricularia gibba HOM05D006291 ORTHO05D007669 3.5e-37 158.3 101 81.2
Aqoxy7G02914 Aquilegia oxysepala HOM05D006291 ORTHO05D007669 7.7e-37 157.1 104 79.8
AT2G07340 Arabidopsis thaliana HOM05D006291 ORTHO05D007669 7.7e-37 157.1 104 79.8
Thecc.10G119800 Theobroma cacao HOM05D006291 ORTHO05D007669 1.3e-36 156.4 103 85.4
Zm00001eb240760 Zea mays HOM05D006291 ORTHO05D007669 1.7e-36 156.0 103 75.7
TWI63G0490 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 2.9e-36 155.2 99 81.8
Eucgr.G00957 Eucalyptus grandis HOM05D006291 ORTHO05D007669 3.8e-36 154.8 103 78.6
HPP92_021942 Vanilla planifolia HOM05D006291 ORTHO05D007669 3.8e-36 154.8 103 77.7
arahy.Tifrunner.gnm1.ann1.8H1PJC Arachis hypogaea HOM05D006291 ORTHO05D007669 5.0e-36 154.5 104 79.8
FAN07G2657 Fragaria x ananassa HOM05D006291 ORTHO05D007669 5.0e-36 154.5 103 78.6
Gorai.009G302200 Gossypium raimondii HOM05D006291 ORTHO05D007669 5.0e-36 154.5 106 80.2
FAN22G0966 Fragaria x ananassa HOM05D006291 ORTHO05D007669 6.5e-36 154.1 103 78.6
PGR044G0028 Punica granatum HOM05D006291 ORTHO05D007669 8.5e-36 153.7 103 78.6
AL3G44130 Arabidopsis lyrata HOM05D006291 ORTHO05D007669 1.1e-35 153.3 99 81.8
FvH4_4g05950 Fragaria vesca HOM05D006291 ORTHO05D007669 1.9e-35 152.5 103 77.7
Gohir.A05G286200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 1.9e-35 152.5 97 82.5
Hund19355 Selenicereus undatus HOM05D006291 ORTHO05D007669 2.5e-35 152.1 103 81.6
CANSAT56G1353 Cannabis sativa HOM05D006291 ORTHO05D007669 4.2e-35 151.4 103 78.6
HPP92_021968 Vanilla planifolia HOM05D006291 ORTHO05D007669 4.2e-35 151.4 102 76.5
CsaV3_2G009230 Cucumis sativus L. HOM05D006291 ORTHO05D007669 5.5e-35 151.0 92 84.8
Sed0008839 Sechium edule HOM05D006291 ORTHO05D007669 7.2e-35 150.6 96 82.3
Medtr8g039140 Medicago truncatula HOM05D006291 ORTHO05D007669 1.2e-34 149.8 104 75.0
Lalb_Chr01g0007741 Lupinus albus HOM05D006291 ORTHO05D007669 2.8e-34 148.7 104 76.0
TPR.G27823 Trifolium pratense HOM05D006291 ORTHO05D007669 2.8e-34 148.7 104 75.0
CDE02G3570 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 8.0e-34 147.1 100 77.0
CANSAT56G3141 Cannabis sativa HOM05D006291 ORTHO05D007669 1.8e-33 146.0 103 76.7
CDE06G0918 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 2.3e-33 145.6 102 73.5
arahy.Tifrunner.gnm1.ann1.SCY2K5 Arachis hypogaea HOM05D006291 ORTHO05D007669 3.0e-33 145.2 103 76.7
Sp6g13890 Schrenkiella parvula HOM05D006291 ORTHO05D007669 3.0e-33 145.2 104 78.8
Glyma.15G235500 Glycine max HOM05D006291 ORTHO05D007669 4.0e-33 144.8 103 72.8
Glyma.13G197100 Glycine max HOM05D006291 ORTHO05D007669 5.2e-33 144.4 103 72.8
MBI16_g09344_MAGBIO Magnolia biondii HOM05D006291 ORTHO05D007669 5.2e-33 144.4 137 62.8
VMungo1127G1563 Vigna mungo HOM05D006291 ORTHO05D007669 5.2e-33 144.4 103 72.8
Ca_23954_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 6.8e-33 144.1 104 72.1
Ca_23960_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 6.8e-33 144.1 104 72.1
Lsat_1_v5_gn_5_80980 Lactuca sativa HOM05D006291 ORTHO05D007669 6.8e-33 144.1 103 78.6
Psat0s418g0040 Pisum sativum HOM05D006291 ORTHO05D007669 6.8e-33 144.1 104 72.1
Lj3g0009914 Lotus japonicus HOM05D006291 ORTHO05D007669 1.2e-32 143.3 103 72.8
Phvul.011G206700 Phaseolus vulgaris HOM05D006291 ORTHO05D007669 2.0e-32 142.5 103 71.8
Thhalv10015026m.g Eutrema salsugineum HOM05D006291 ORTHO05D007669 3.4e-32 141.7 104 76.0
BcaB01g04158 Brassica carinata HOM05D006291 ORTHO05D007669 4.4e-32 141.4 112 69.6
Dinv26485 Davidia involucrata HOM05D006291 ORTHO05D007669 5.7e-32 141.0 99 80.8
FAN12G2114 Fragaria x ananassa HOM05D006291 ORTHO05D007669 7.5e-32 140.6 105 73.3
Atru.BG.15.p Acer truncatum HOM05D006291 ORTHO05D007669 9.8e-32 140.2 101 78.2
CDE06G1428 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 2.2e-31 139.0 101 73.3
MELO3C003910.2 Cucumis melo HOM05D006291 ORTHO05D007669 4.9e-31 137.9 92 79.3
A03p16050 Brassica napus HOM05D006291 ORTHO05D007669 6.3e-31 137.5 104 74.0
BcaC01g06135 Brassica carinata HOM05D006291 ORTHO05D007669 1.1e-30 136.7 104 73.1
C03p18890 Brassica napus HOM05D006291 ORTHO05D007669 1.1e-30 136.7 104 73.1
Aa31LG8G11030 Aethionema arabicum HOM05D006291 ORTHO05D007669 3.1e-30 135.2 147 56.5
Pp3c19_4350 Physcomitrium patens HOM05D006291 ORTHO05D007669 2.1e-26 122.5 102 60.8
Mapoly0027s0144 Marchantia polymorpha HOM05D006291 ORTHO05D007669 4.7e-26 121.3 103 59.2
Actinidia02472 Actinidia chinensis HOM05D006291 ORTHO05D007669 4.0e-25 118.2 79 79.7
AagrBONN_evm.TU.Sc2ySwM_362.1895 Anthoceros agrestis HOM05D006291 ORTHO05D007669 5.7e-24 114.4 100 54.0
Actinidia07563 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.3e-23 113.2 66 90.9
SalBow3G3584 Salvia bowleyana HOM05D006291 ORTHO05D007669 1.3e-23 113.2 110 64.5
TWI32G0019 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 1.7e-23 112.8 87 70.1
Dinv12620 Davidia involucrata HOM05D006291 ORTHO05D007669 1.1e-22 110.2 67 86.6
SMO200G0161 Selaginella moellendorffii HOM05D006291 ORTHO05D007669 1.1e-22 110.2 103 55.3
Nitab4.5_0000170g0080 Nicotiana tabacum HOM05D006291 ORTHO05D007669 1.4e-22 109.8 71 77.5
BcaC04g20645 Brassica carinata HOM05D006291 ORTHO05D007669 2.1e-18 95.9 67 76.1
BraA03t10896Z Brassica rapa HOM05D006291 ORTHO05D007669 2.0e-16 89.4 69 71.0
BcaB08g35517 Brassica carinata HOM05D006291 ORTHO05D007669 2.6e-16 89.0 64 73.4
BolC3t14281H Brassica oleracea HOM05D006291 ORTHO05D007669 4.4e-16 88.2 65 73.8
BolC9t56988H Brassica oleracea HOM05D006291 ORTHO05D007669 2.9e-15 85.5 67 71.6
Cpa.g.sc91.61 Carica papaya HOM05D006291 ORTHO05D007669 6.4e-15 84.3 55 85.5
C09p41100 Brassica napus HOM05D006291 ORTHO05D007669 1.4e-14 83.2 68 69.1
Nitab4.5_0002603g0030 Nicotiana tabacum HOM05D006291 ORTHO05D007669 6.6e-12 74.3 46 76.1
BolC3t14280H Brassica oleracea HOM05D006291 ORTHO05D007669 3.1e-09 65.5 37 83.8
Os02g0462900 Oryza sativa ssp. japonica HOM05D006291 ORTHO05D007669 1.5e-08 63.2 38 73.7
CARHR104040 Cardamine hirsuta HOM05D006291 ORTHO05D007669 2.0e-08 62.8 37 83.8
ClCG11G011210 Citrullus lanatus HOM05D006291 ORTHO05D007669 3.4e-08 62.0 37 75.7
Haze_19088 Corylus avellana HOM05D000287 ORTHO05D000319 9.9e-08 60.5 41 75.6
PRCOL_00006384 Prasinoderma coloniale HOM05D006291 ORTHO05D007669 9.9e-08 60.5 91 34.1
vmacro20755 Vaccinium macrocarpon HOM05D006291 ORTHO05D007669 9.9e-08 60.5 38 81.6
SEGI_05817 Sequoiadendron giganteum HOM05D006291 ORTHO05D007669 1.3e-07 60.1 37 73.0


User provided reference genes

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