Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_020437 Daucus carota HOM05D006461 ORTHO05D008199 1.0e-79 300.1 157 100.0
Rhsim03G0225700 Rhododendron simsii HOM05D006461 ORTHO05D008199 1.0e-42 177.2 168 61.9
Actinidia08786 Actinidia chinensis HOM05D006461 ORTHO05D008199 5.0e-42 174.9 165 61.8
Hma1.2p1_0074F.1_g039100 Hydrangea macrophylla HOM05D006461 ORTHO05D008199 5.0e-42 174.9 159 63.5
Atru.chr2.1733 Acer truncatum HOM05D006461 ORTHO05D008199 1.4e-39 166.8 166 59.0
Aqoxy3G01574 Aquilegia oxysepala HOM05D006461 ORTHO05D008199 3.0e-39 165.6 123 72.4
QL09p005902 Quercus lobata HOM05D006461 ORTHO05D008199 8.8e-39 164.1 163 61.3
Cc02_g00020 Coffea canephora HOM05D006461 ORTHO05D008199 1.5e-38 163.3 159 58.5
Nitab4.5_0000021g0870 Nicotiana tabacum HOM05D006461 ORTHO05D008199 2.0e-38 162.9 155 59.4
Dinv19309 Davidia involucrata HOM05D006461 ORTHO05D008199 2.6e-38 162.5 98 83.7
TAR375G0815 Trochodendron aralioides HOM05D006461 ORTHO05D008199 4.4e-38 161.8 170 59.4
CAN.G732.29 Capsicum annuum HOM05D006461 ORTHO05D008199 5.7e-38 161.4 165 59.4
arahy.Tifrunner.gnm1.ann1.8SK5FU Arachis hypogaea HOM05D006461 ORTHO05D008199 7.4e-38 161.0 161 59.6
Sed0021956 Sechium edule HOM05D006461 ORTHO05D008199 7.4e-38 161.0 102 82.4
Thecc.05G228900 Theobroma cacao HOM05D006461 ORTHO05D008199 9.7e-38 160.6 105 79.0
MSTRG.8560 Avicennia marina HOM05D006461 ORTHO05D008199 1.3e-37 160.2 166 56.0
CsaV3_5G005660 Cucumis sativus L. HOM05D006461 ORTHO05D008199 1.3e-37 160.2 151 59.6
Migut.F00927 Erythranthe guttata HOM05D006461 ORTHO05D008199 1.3e-37 160.2 103 77.7
Manes.08G158500 Manihot esculenta HOM05D006461 ORTHO05D008199 1.3e-37 160.2 102 81.4
Nitab4.5_0005545g0020 Nicotiana tabacum HOM05D006461 ORTHO05D008199 1.3e-37 160.2 155 58.7
arahy.Tifrunner.gnm1.ann1.W7YZT9 Arachis hypogaea HOM05D006461 ORTHO05D008199 1.7e-37 159.8 155 60.0
Peaxi162Scf00516g00428 Petunia axillaris HOM05D006461 ORTHO05D008199 1.7e-37 159.8 158 58.2
Potri.013G074100 Populus trichocarpa HOM05D006461 ORTHO05D008199 2.2e-37 159.5 106 77.4
Cfa016120 Carpinus fangiana HOM05D006461 ORTHO05D008199 2.8e-37 159.1 115 74.8
ClCG01G005420 Citrullus lanatus HOM05D006461 ORTHO05D008199 2.8e-37 159.1 153 60.1
Nn3g19117 Nelumbo nucifera HOM05D006461 ORTHO05D008199 2.8e-37 159.1 164 59.1
Ciclev10032825m.g Citrus clementina HOM05D006461 ORTHO05D008199 4.8e-37 158.3 179 59.2
Duzib106G1824 Durio zibethinus HOM05D006461 ORTHO05D008199 6.3e-37 157.9 103 77.7
Cc11_g04930 Coffea canephora HOM05D006461 ORTHO05D008199 1.1e-36 157.1 107 72.9
MELO3C005387.2 Cucumis melo HOM05D006461 ORTHO05D008199 1.1e-36 157.1 151 58.9
Ah.08g222190 Amaranthus hybridus HOM05D006461 ORTHO05D008199 2.4e-36 156.0 129 67.4
Glyma.02G000900 Glycine max HOM05D006461 ORTHO05D008199 2.4e-36 156.0 132 67.4
SalBow2G0694 Salvia bowleyana HOM05D006461 ORTHO05D008199 2.4e-36 156.0 165 57.6
PGR119G0757 Punica granatum HOM05D006461 ORTHO05D008199 3.1e-36 155.6 114 73.7
CiPaw.05G210400 Carya illinoinensis HOM05D006461 ORTHO05D008199 4.1e-36 155.2 92 84.8
Gohir.D13G163800 Gossypium hirsutum HOM05D006461 ORTHO05D008199 4.1e-36 155.2 108 74.1
Sopen03g028120 Solanum pennellii HOM05D006461 ORTHO05D008199 4.1e-36 155.2 155 56.8
PGSC0003DMG400026478 Solanum tuberosum HOM05D006461 ORTHO05D008199 4.1e-36 155.2 160 56.2
Gorai.013G199400 Gossypium raimondii HOM05D006461 ORTHO05D008199 7.0e-36 154.5 108 74.1
Psat6g101920 Pisum sativum HOM05D006461 ORTHO05D008199 7.0e-36 154.5 160 58.8
Solyc03g097360.3 Solanum lycopersicum HOM05D006461 ORTHO05D008199 7.0e-36 154.5 160 55.6
Lsat_1_v5_gn_9_48000 Lactuca sativa HOM05D006461 ORTHO05D008199 9.1e-36 154.1 158 55.7
SGA_v2.0_scaffold51G18860 Striga asiatica HOM05D006461 ORTHO05D008199 9.1e-36 154.1 161 55.9
unitig_62.g23822 Utricularia gibba HOM05D006461 ORTHO05D008199 9.1e-36 154.1 132 63.6
AUR62020207 Chenopodium quinoa HOM05D006461 ORTHO05D008199 1.6e-35 153.3 139 63.3
TPR.G30220 Trifolium pratense HOM05D006461 ORTHO05D008199 2.0e-35 152.9 166 56.0
Ca_26296_v3 Cicer arietinum L. HOM05D006461 ORTHO05D008199 2.6e-35 152.5 159 57.9
AUR62001576 Chenopodium quinoa HOM05D006461 ORTHO05D008199 4.5e-35 151.8 137 62.0
ECA232G1267 Erigeron canadensis HOM05D006461 ORTHO05D008199 4.5e-35 151.8 162 54.3
FvH4_4g10840 Fragaria vesca HOM05D006461 ORTHO05D008199 4.5e-35 151.8 113 73.5
Prupe.1G398900 Prunus persica HOM05D006461 ORTHO05D008199 5.9e-35 151.4 167 54.5
SEGI_06006 Sequoiadendron giganteum HOM05D006461 ORTHO05D008199 7.7e-35 151.0 98 74.5
CiPaw.06G037900 Carya illinoinensis HOM05D006461 ORTHO05D008199 1.0e-34 150.6 105 78.1
Gohir.A13G158700 Gossypium hirsutum HOM05D006461 ORTHO05D008199 1.0e-34 150.6 108 71.3
Medtr1g040145 Medicago truncatula HOM05D006461 ORTHO05D008199 1.3e-34 150.2 160 55.6
FAN12G0004 Fragaria x ananassa HOM05D006461 ORTHO05D008199 1.7e-34 149.8 108 75.0
FAN17G2347 Fragaria x ananassa HOM05D006461 ORTHO05D008199 1.7e-34 149.8 108 75.0
Lj6g0024347 Lotus japonicus HOM05D006461 ORTHO05D008199 1.7e-34 149.8 154 56.5
MD08G1049500 Malus domestica HOM05D006461 ORTHO05D008199 2.9e-34 149.1 169 52.7
Sc03g0004610 Simmondsia chinensis HOM05D006461 ORTHO05D008199 3.8e-34 148.7 132 63.6
PSO063G2738 Papaver somniferum HOM05D006461 ORTHO05D008199 5.0e-34 148.3 105 73.3
VMungo0720G0947 Vigna mungo HOM05D006461 ORTHO05D008199 5.0e-34 148.3 153 59.5
TWI32G0808 Tripterygium wilfordii HOM05D006461 ORTHO05D008199 6.5e-34 147.9 177 50.3
CANSAT54G2891 Cannabis sativa HOM05D006461 ORTHO05D008199 8.5e-34 147.5 87 83.9
Manes.09G131300 Manihot esculenta HOM05D006461 ORTHO05D008199 8.5e-34 147.5 102 75.5
RcHm_v2.0_Chr4g0406641 Rosa chinensis HOM05D006461 ORTHO05D008199 1.1e-33 147.1 102 76.5
MD15G1045100 Malus domestica HOM05D006461 ORTHO05D008199 1.5e-33 146.7 167 53.3
EL10Ac7g16271 Beta vulgaris HOM05D006461 ORTHO05D008199 1.9e-33 146.4 133 62.4
CDE12G0687 Ceratophyllum demersum HOM05D006461 ORTHO05D008199 1.9e-33 146.4 162 55.6
Phvul.007G281100 Phaseolus vulgaris HOM05D006461 ORTHO05D008199 2.5e-33 146.0 155 56.8
THA.LOC104802902 Tarenaya hassleriana HOM05D006461 ORTHO05D008199 4.2e-33 145.2 106 70.8
A10p21840 Brassica napus HOM05D006461 ORTHO05D008199 9.4e-33 144.1 99 73.7
GSVIVG01024255001 Vitis vinifera HOM05D006461 ORTHO05D008199 9.4e-33 144.1 81 90.1
Sp6g26660 Schrenkiella parvula HOM05D006461 ORTHO05D008199 2.1e-32 142.9 112 67.9
BcaC04g18779 Brassica carinata HOM05D006461 ORTHO05D008199 1.0e-31 140.6 89 77.5
C09p59590 Brassica napus HOM05D006461 ORTHO05D008199 1.0e-31 140.6 89 77.5
BraA10t44244Z Brassica rapa HOM05D006461 ORTHO05D008199 1.0e-31 140.6 89 77.5
Thhalv10014786m.g Eutrema salsugineum HOM05D006461 ORTHO05D008199 1.8e-31 139.8 99 71.7
HanXRQChr05g0140271 Helianthus annuus HOM05D006461 ORTHO05D008199 2.3e-31 139.4 103 71.8
Sabra13G0064300 Salix brachista HOM05D006461 ORTHO05D008199 2.3e-31 139.4 97 74.2
BcaB01g04940 Brassica carinata HOM05D006461 ORTHO05D008199 3.0e-31 139.0 99 71.7
BcaB01g05208 Brassica carinata HOM05D006461 ORTHO05D008199 3.0e-31 139.0 99 71.7
BcaB08g36762 Brassica carinata HOM05D006461 ORTHO05D008199 3.0e-31 139.0 99 71.7
A03p08420 Brassica napus HOM05D006461 ORTHO05D008199 3.0e-31 139.0 99 71.7
C03p09820 Brassica napus HOM05D006461 ORTHO05D008199 3.0e-31 139.0 99 71.7
BolC3t13470H Brassica oleracea HOM05D006461 ORTHO05D008199 3.0e-31 139.0 99 71.7
BraA03t10165Z Brassica rapa HOM05D006461 ORTHO05D008199 3.0e-31 139.0 99 71.7
Mapoly0098s0024 Marchantia polymorpha HOM05D006461 ORTHO05D008199 3.0e-31 139.0 141 56.0
AL6G28650 Arabidopsis lyrata HOM05D006461 ORTHO05D008199 4.0e-31 138.7 99 70.7
BolC9t58798H Brassica oleracea HOM05D006461 ORTHO05D008199 5.2e-31 138.3 89 76.4
CARHR195620 Cardamine hirsuta HOM05D006461 ORTHO05D008199 6.7e-31 137.9 89 76.4
Aa31LG11G12100 Aethionema arabicum HOM05D006461 ORTHO05D008199 8.8e-31 137.5 97 71.1
Hund20961 Selenicereus undatus HOM05D006461 ORTHO05D008199 2.0e-30 136.3 158 53.8
SMO358G0572 Selaginella moellendorffii HOM05D006461 ORTHO05D008199 2.6e-30 136.0 146 54.8
Carub.0006s1580 Capsella rubella HOM05D006461 ORTHO05D008199 5.7e-30 134.8 99 69.7
Haze_00341 Corylus avellana HOM05D006461 ORTHO05D000508 7.5e-30 134.4 155 54.8
TWI60G1716 Tripterygium wilfordii HOM05D006461 ORTHO05D008199 3.7e-29 132.1 138 57.2
Pp3c1_12810 Physcomitrium patens HOM05D006461 ORTHO05D008199 8.2e-29 131.0 98 69.4
Lj7P538T25 Lonicera japonica HOM05D006461 ORTHO05D008199 2.4e-28 129.4 76 84.2
AagrBONN_evm.TU.Sc2ySwM_117.1385 Anthoceros agrestis HOM05D006461 ORTHO05D008199 7.0e-28 127.9 99 63.6
Actinidia24631 Actinidia chinensis HOM05D006461 ORTHO05D008199 3.5e-27 125.6 81 80.2
Os06g0484600 Oryza sativa ssp. japonica HOM05D006461 ORTHO05D008199 7.7e-27 124.4 88 69.3
HPP92_003741 Vanilla planifolia HOM05D001207 ORTHO05D007056 1.0e-26 124.0 75 80.0
Zm00001eb278180 Zea mays HOM05D006461 ORTHO05D008199 5.5e-25 118.2 134 53.0
Hund18806 Selenicereus undatus HOM05D006461 ORTHO05D008199 8.0e-24 114.4 85 65.9
Sed0001670 Sechium edule HOM05D006461 ORTHO05D008199 8.8e-23 110.9 102 60.8
Cre09.g394701 Chlamydomonas reinhardtii HOM05D006461 ORTHO05D008199 2.0e-22 109.8 84 63.1
PRCOL_00004611 Prasinoderma coloniale HOM05D006461 ORTHO05D008199 1.4e-20 103.6 82 58.5
MCO16G354 Micromonas commoda HOM05D006461 ORTHO05D008199 3.3e-17 92.4 82 57.3
CSS0025765 Camellia sinensis var. sinensis HOM05D006461 ORTHO05D008199 5.5e-17 91.7 160 40.6
CSS0040075 Camellia sinensis var. sinensis HOM05D006461 ORTHO05D008199 5.5e-17 91.7 160 40.6
SMO358G0215 Selaginella moellendorffii HOM05D006461 ORTHO05D008199 2.1e-16 89.7 84 47.6
Eucgr.A02995 Eucalyptus grandis HOM05D006461 ORTHO05D008199 2.8e-16 89.4 49 89.8
Actinidia28897 Actinidia chinensis HOM05D006461 ORTHO05D008199 1.0e-15 87.4 116 49.1
Lalb_Chr19g0127781 Lupinus albus HOM05D006461 ORTHO05D008199 1.5e-14 83.6 47 85.1
SHI39095 Sapria himalayana HOM05D006461 ORTHO05D008199 1.8e-12 76.6 103 41.7
Cpa.g.sc2589.1 Carica papaya HOM05D006461 ORTHO05D008199 2.3e-10 69.7 53 67.9
AT5G17560 Arabidopsis thaliana HOM05D006461 ORTHO05D008199 1.8e-07 60.1 43 67.4
Mapoly0051s0029 Marchantia polymorpha HOM05D002854 ORTHO05D003051 2.0e-06 56.6 96 38.5
AL3G12680 Arabidopsis lyrata HOM05D000403 ORTHO05D000350 7.5e-06 54.7 50 58.0


User provided reference genes

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