Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_020406 Daucus carota HOM05D007045 ORTHO05D008872 1.5e-50 202.6 108 100.0
Actinidia34304 Actinidia chinensis HOM05D007045 ORTHO05D008872 5.0e-33 144.4 107 70.1
Actinidia08743 Actinidia chinensis HOM05D007045 ORTHO05D008872 1.1e-32 143.3 107 69.2
Dinv29160 Davidia involucrata HOM05D007045 ORTHO05D008872 1.1e-32 143.3 106 69.8
Lsat_1_v5_gn_9_47440 Lactuca sativa HOM05D007045 ORTHO05D008872 1.8e-30 136.0 108 65.7
QL09p024203 Quercus lobata HOM05D007045 ORTHO05D008872 8.8e-30 133.7 107 64.5
QL09p024468 Quercus lobata HOM05D007045 ORTHO05D008872 8.8e-30 133.7 107 64.5
CiPaw.05G239000 Carya illinoinensis HOM05D007045 ORTHO05D008872 1.5e-29 132.9 107 61.7
TAR375G0210 Trochodendron aralioides HOM05D007045 ORTHO05D008872 3.3e-29 131.7 107 61.7
ECA232G1212 Erigeron canadensis HOM05D007045 ORTHO05D008872 5.7e-29 131.0 110 63.6
Cfa015871 Carpinus fangiana HOM05D007045 ORTHO05D008872 1.3e-28 129.8 107 61.7
CSS0008098 Camellia sinensis var. sinensis HOM05D007045 ORTHO05D008872 3.7e-28 128.3 103 66.0
MSTRG.26931 Avicennia marina HOM05D007045 ORTHO05D008872 4.8e-28 127.9 105 64.8
HanXRQChr05g0141731 Helianthus annuus HOM05D007045 ORTHO05D008872 4.8e-28 127.9 102 63.7
Oeu041498.1 Olea europaea HOM05D007045 ORTHO05D008872 2.4e-27 125.6 107 59.8
PGSC0003DMG400000566 Solanum tuberosum HOM05D007045 ORTHO05D008872 4.1e-27 124.8 101 66.3
SGA_v2.0_scaffold44G16886 Striga asiatica HOM05D007045 ORTHO05D008872 4.1e-27 124.8 110 60.0
Sp1g07240 Schrenkiella parvula HOM05D007045 ORTHO05D008872 9.1e-27 123.6 111 59.5
CDE03G0192 Ceratophyllum demersum HOM05D007045 ORTHO05D008872 1.2e-26 123.2 101 62.4
HPP92_009021 Vanilla planifolia HOM05D007045 ORTHO05D008872 1.5e-26 122.9 108 62.0
Eucgr.K00089 Eucalyptus grandis HOM05D007045 ORTHO05D008872 2.0e-26 122.5 109 61.5
Sopen03g027710 Solanum pennellii HOM05D007045 ORTHO05D008872 2.0e-26 122.5 109 60.6
Thhalv10009120m.g Eutrema salsugineum HOM05D007045 ORTHO05D008872 3.4e-26 121.7 111 58.6
VMungo0464G1228 Vigna mungo HOM05D007045 ORTHO05D008872 3.4e-26 121.7 107 59.8
Hma1.2p1_1680F.1_g297210 Hydrangea macrophylla HOM05D007045 ORTHO05D008872 5.9e-26 120.9 131 54.2
Phvul.004G000900 Phaseolus vulgaris HOM05D007045 ORTHO05D008872 5.9e-26 120.9 98 62.2
Nitab4.5_0000021g0510 Nicotiana tabacum HOM05D007045 ORTHO05D008872 7.7e-26 120.6 129 52.7
Psat1g052360 Pisum sativum HOM05D007045 ORTHO05D008872 7.7e-26 120.6 108 56.5
GSVIVG01024412001 Vitis vinifera HOM05D007045 ORTHO05D008872 7.7e-26 120.6 108 58.3
Solyc03g096960.3 Solanum lycopersicum HOM05D007045 ORTHO05D008872 1.0e-25 120.2 108 60.2
Glyma.05G000800 Glycine max HOM05D007045 ORTHO05D008872 1.3e-25 119.8 108 59.3
Nitab4.5_0011930g0010 Nicotiana tabacum HOM05D007045 ORTHO05D008872 1.3e-25 119.8 109 60.6
THA.LOC104821194 Tarenaya hassleriana HOM05D007045 ORTHO05D008872 2.2e-25 119.0 114 59.6
PSO063G7366 Papaver somniferum HOM05D007045 ORTHO05D008872 2.9e-25 118.6 108 61.1
PSO782G4413 Papaver somniferum HOM05D007045 ORTHO05D008872 2.9e-25 118.6 108 61.1
vmacro10189 Vaccinium macrocarpon HOM05D007045 ORTHO05D008872 2.9e-25 118.6 78 76.9
vmacro23523 Vaccinium macrocarpon HOM05D007045 ORTHO05D008872 2.9e-25 118.6 78 76.9
AT1G08580 Arabidopsis thaliana HOM05D007045 ORTHO05D008872 6.5e-25 117.5 111 55.9
Glyma.19G000800 Glycine max HOM05D007045 ORTHO05D008872 6.5e-25 117.5 106 57.5
Nn1g01937 Nelumbo nucifera HOM05D007045 ORTHO05D008872 6.5e-25 117.5 107 55.1
Hund09789 Selenicereus undatus HOM05D007045 ORTHO05D008872 6.5e-25 117.5 98 64.3
arahy.Tifrunner.gnm1.ann1.X2XK4P Arachis hypogaea HOM05D007045 ORTHO05D008872 1.1e-24 116.7 101 61.4
TPR.G25217 Trifolium pratense HOM05D007045 ORTHO05D008872 1.1e-24 116.7 107 56.1
arahy.Tifrunner.gnm1.ann1.X6PR1P Arachis hypogaea HOM05D007045 ORTHO05D008872 1.4e-24 116.3 107 58.9
Gohir.A09G104600 Gossypium hirsutum HOM05D007045 ORTHO05D008872 1.4e-24 116.3 112 56.2
Ca_04126_v3 Cicer arietinum L. HOM05D007045 ORTHO05D008872 1.9e-24 115.9 107 55.1
SalBow4G0316 Salvia bowleyana HOM05D007045 ORTHO05D008872 1.9e-24 115.9 104 57.7
Sc15g0002300 Simmondsia chinensis HOM05D007045 ORTHO05D008872 1.9e-24 115.9 107 57.0
Atru.chr12.1972 Acer truncatum HOM05D007045 ORTHO05D008872 2.5e-24 115.5 98 58.2
Manes.08G162500 Manihot esculenta HOM05D007045 ORTHO05D008872 2.5e-24 115.5 108 60.2
THA.LOC104805790 Tarenaya hassleriana HOM05D007045 ORTHO05D008872 2.5e-24 115.5 113 58.4
A06p05570 Brassica napus HOM05D007045 ORTHO05D008872 3.2e-24 115.2 107 54.2
BraA06t23765Z Brassica rapa HOM05D007045 ORTHO05D008872 3.2e-24 115.2 107 54.2
BcaB07g34101 Brassica carinata HOM05D007045 ORTHO05D008872 4.2e-24 114.8 108 56.5
C05p06680 Brassica napus HOM05D007045 ORTHO05D008872 4.2e-24 114.8 108 56.5
BolC5t29428H Brassica oleracea HOM05D007045 ORTHO05D008872 4.2e-24 114.8 108 56.5
Medtr6g004010 Medicago truncatula HOM05D007045 ORTHO05D008872 5.5e-24 114.4 110 56.4
Gohir.D09G101300 Gossypium hirsutum HOM05D007045 ORTHO05D008872 9.4e-24 113.6 112 54.5
BcaC07g41937 Brassica carinata HOM05D007045 ORTHO05D008872 1.2e-23 113.2 110 53.6
C08p49930 Brassica napus HOM05D007045 ORTHO05D008872 1.2e-23 113.2 114 52.6
BraA09t41928Z Brassica rapa HOM05D007045 ORTHO05D008872 1.2e-23 113.2 108 54.6
Duzib168G0464 Durio zibethinus HOM05D007045 ORTHO05D008872 1.2e-23 113.2 111 55.9
AL1G19010 Arabidopsis lyrata HOM05D007045 ORTHO05D008872 1.6e-23 112.8 97 57.7
BolC8t52521H Brassica oleracea HOM05D007045 ORTHO05D008872 1.6e-23 112.8 114 52.6
A09p65840 Brassica napus HOM05D007045 ORTHO05D008872 2.1e-23 112.5 108 53.7
Gorai.006G118700 Gossypium raimondii HOM05D007045 ORTHO05D008872 2.7e-23 112.1 110 55.5
Aa31sc20G150 Aethionema arabicum HOM05D007045 ORTHO05D008872 3.6e-23 111.7 116 53.4
Peaxi162Scf00745g00819 Petunia axillaris HOM05D007045 ORTHO05D008872 4.7e-23 111.3 84 67.9
Prupe.2G325600 Prunus persica HOM05D007045 ORTHO05D008872 7.9e-23 110.5 109 57.8
Potri.019G049300 Populus trichocarpa HOM05D007045 ORTHO05D008872 1.0e-22 110.2 100 60.0
TWI34G0185 Tripterygium wilfordii HOM05D007045 ORTHO05D008872 1.0e-22 110.2 105 57.1
Sabra19G0058900 Salix brachista HOM05D007045 ORTHO05D008872 1.4e-22 109.8 110 60.0
CAN.G303.80 Capsicum annuum HOM05D007045 ORTHO05D008872 1.8e-22 109.4 89 65.2
CDE06G1066 Ceratophyllum demersum HOM05D007045 ORTHO05D008872 1.8e-22 109.4 91 60.4
COL.COLO4_25316 Corchorus olitorius HOM05D007045 ORTHO05D008872 1.8e-22 109.4 104 55.8
Migut.F00099 Erythranthe guttata HOM05D007045 ORTHO05D008872 1.8e-22 109.4 107 57.9
Lj2g0018633 Lotus japonicus HOM05D007045 ORTHO05D008872 1.8e-22 109.4 108 55.6
PGR142G4292 Punica granatum HOM05D007045 ORTHO05D008872 2.3e-22 109.0 111 55.9
unitig_92.g28229 Utricularia gibba HOM05D007045 ORTHO05D008872 2.3e-22 109.0 105 57.1
Ciclev10022834m.g Citrus clementina HOM05D007045 ORTHO05D008872 5.1e-22 107.8 112 56.2
FvH4_7g33930 Fragaria vesca HOM05D007045 ORTHO05D008872 5.1e-22 107.8 110 55.5
FAN01G0253 Fragaria x ananassa HOM05D007045 ORTHO05D008872 5.1e-22 107.8 110 55.5
RcHm_v2.0_Chr1g0384121 Rosa chinensis HOM05D007045 ORTHO05D008872 6.7e-22 107.5 100 58.0
AUR62002059 Chenopodium quinoa HOM05D007045 ORTHO05D008872 2.0e-21 105.9 107 53.3
EL10Ac3g05081 Beta vulgaris HOM05D007045 ORTHO05D008872 2.6e-21 105.5 98 57.1
Thecc.09G264800 Theobroma cacao HOM05D007045 ORTHO05D008872 2.6e-21 105.5 111 54.1
Ah.04g156750 Amaranthus hybridus HOM05D007045 ORTHO05D008872 3.3e-21 105.1 99 58.6
FAN03G1405 Fragaria x ananassa HOM05D007045 ORTHO05D008872 4.4e-21 104.8 110 53.6
FAN10G3708 Fragaria x ananassa HOM05D007045 ORTHO05D008872 9.7e-21 103.6 102 53.9
ATR0829G056 Amborella trichopoda HOM05D007045 ORTHO05D008872 6.3e-20 100.9 99 54.5
MD07G1308400 Malus domestica HOM05D007045 ORTHO05D008872 6.3e-20 100.9 108 54.6
CANSAT56G0844 Cannabis sativa HOM05D007045 ORTHO05D008872 1.1e-19 100.1 83 59.0
CANSAT56G3248 Cannabis sativa HOM05D007045 ORTHO05D008872 1.1e-19 100.1 83 59.0
MD01G1235600 Malus domestica HOM05D007045 ORTHO05D008872 1.4e-19 99.8 76 65.8
SalBow4G2109 Salvia bowleyana HOM05D007045 ORTHO05D008872 1.8e-19 99.4 135 43.7
AUR62028173 Chenopodium quinoa HOM05D007045 ORTHO05D008872 2.4e-19 99.0 98 54.1
Sed0010546 Sechium edule HOM05D007045 ORTHO05D008872 4.1e-19 98.2 104 52.9
Cc02_g00300 Coffea canephora HOM05D007045 ORTHO05D008872 7.7e-18 94.0 120 52.5
CARHR008480 Cardamine hirsuta HOM05D007045 ORTHO05D008872 2.9e-17 92.0 75 58.7
Os02g0604100 Oryza sativa ssp. japonica HOM05D007045 ORTHO05D008872 6.5e-17 90.9 110 52.7
CsaV3_3G015710 Cucumis sativus L. HOM05D007045 ORTHO05D008872 8.5e-17 90.5 105 50.5
MELO3C006770.2 Cucumis melo HOM05D007045 ORTHO05D008872 2.5e-16 89.0 105 49.5
Potri.013G091200 Populus trichocarpa HOM05D007045 ORTHO05D008872 7.2e-16 87.4 81 54.3
Carub.0001s0794 Capsella rubella HOM05D007045 ORTHO05D008872 1.2e-15 86.7 70 58.6
Aqoxy3G02091 Aquilegia oxysepala HOM05D007045 ORTHO05D008872 6.7e-14 80.9 112 48.2
ClCG05G007020 Citrullus lanatus HOM05D007045 ORTHO05D008872 2.0e-13 79.3 107 43.9
Zm00001eb246550 Zea mays HOM05D007045 ORTHO05D008872 3.3e-13 78.6 110 46.4
MELO3C032558.2 Cucumis melo HOM05D007045 ORTHO05D008872 1.1e-11 73.6 77 53.2
Pp3c4_15620 Physcomitrium patens HOM05D007045 ORTHO05D008872 2.7e-07 58.9 119 36.1
Mapoly0084s0018 Marchantia polymorpha HOM05D007045 ORTHO05D008872 8.0e-07 57.4 110 38.2
Pp3c13_5290 Physcomitrium patens HOM05D007045 ORTHO05D008872 1.0e-06 57.0 109 37.6
CBR_g50944 Chara braunii HOM05D007045 ORTHO05D008872 6.7e-06 54.3 69 43.5


User provided reference genes

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