Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_020266 Daucus carota HOM05D006627 ORTHO05D007753 0.0e+00 2469.1 1251 100.0
DCAR_009389 Daucus carota HOM05D006627 ORTHO05D007753 0.0e+00 1133.2 1283 55.0
Lj1C1004T5 Lonicera japonica HOM05D006627 ORTHO05D007753 5.8e-202 709.1 1339 40.1
Dinv28394 Davidia involucrata HOM05D006627 ORTHO05D007753 8.0e-159 565.8 1309 36.7
GSVIVG01028875001 Vitis vinifera HOM05D006627 ORTHO05D007753 8.9e-126 456.1 1214 33.8
Oeu060456.3 Olea europaea HOM05D006627 ORTHO05D007753 1.4e-115 422.2 1308 32.5
Cc02_g02490 Coffea canephora HOM05D006627 ORTHO05D007753 1.9e-104 385.2 1258 32.1
Actinidia34148 Actinidia chinensis HOM05D001410 ORTHO05D007753 6.2e-103 380.2 1234 32.6
vmacro06637 Vaccinium macrocarpon HOM05D006627 ORTHO05D007753 2.0e-101 375.2 1307 31.6
Rhsim03G0190100 Rhododendron simsii HOM05D006627 ORTHO05D007753 1.4e-99 369.0 1267 32.2
Thecc.03G182600 Theobroma cacao HOM05D006627 ORTHO05D007753 1.0e-97 362.8 1300 30.8
Duzib205G1471 Durio zibethinus HOM05D006627 ORTHO05D007753 1.1e-96 359.4 1267 30.5
TAR375G0196 Trochodendron aralioides HOM05D006627 ORTHO05D007753 1.3e-95 355.9 1524 30.6
Rhsim07G0129200 Rhododendron simsii HOM05D006627 ORTHO05D007753 5.3e-94 350.5 1269 31.0
Rhsim07G0129400 Rhododendron simsii HOM05D006627 ORTHO05D007753 2.9e-92 344.7 1261 31.5
FAN03G1328 Fragaria x ananassa HOM05D006627 ORTHO05D007753 4.9e-92 344.0 1275 31.1
FAN03G3330 Fragaria x ananassa HOM05D006627 ORTHO05D007753 3.2e-91 341.3 1275 31.1
FAN06G3118 Fragaria x ananassa HOM05D006627 ORTHO05D007753 5.5e-91 340.5 1279 31.4
Actinidia03134 Actinidia chinensis HOM05D006627 ORTHO05D007753 7.1e-91 340.1 1248 32.0
CSS0035854 Camellia sinensis var. sinensis HOM05D006627 ORTHO05D007753 7.1e-91 340.1 1086 32.2
CSS0044230 Camellia sinensis var. sinensis HOM05D006627 ORTHO05D007753 7.1e-91 340.1 1086 32.2
FAN10G1026 Fragaria x ananassa HOM05D006627 ORTHO05D007753 6.7e-89 333.6 1273 31.3
Peaxi162Scf00444g00008 Petunia axillaris HOM05D006627 ORTHO05D007753 1.5e-88 332.4 1283 30.4
FAN10G1355 Fragaria x ananassa HOM05D006627 ORTHO05D007753 4.3e-88 330.9 1273 31.5
FAN06G3804 Fragaria x ananassa HOM05D006627 ORTHO05D007753 7.4e-88 330.1 1272 31.2
Nn1g01607 Nelumbo nucifera HOM05D006627 ORTHO05D007753 9.6e-88 329.7 1453 28.6
vmacro06638 Vaccinium macrocarpon HOM05D006627 ORTHO05D007753 3.7e-87 327.8 1267 30.6
RcHm_v2.0_Chr1g0378101 Rosa chinensis HOM05D006627 ORTHO05D007753 1.5e-85 322.4 1256 30.8
Nn1g01606 Nelumbo nucifera HOM05D006627 ORTHO05D007753 1.3e-84 319.3 1491 28.4
FvH4_7g30110 Fragaria vesca HOM05D006627 ORTHO05D007753 8.4e-84 316.6 1238 30.9
FAN01G2627 Fragaria x ananassa HOM05D006627 ORTHO05D007753 1.2e-82 312.8 1237 31.5
Prupe.2G299600 Prunus persica HOM05D006627 ORTHO05D007753 1.6e-79 302.4 1278 30.4
TAR629G2332 Trochodendron aralioides HOM05D006627 ORTHO05D007753 4.8e-79 300.8 1493 28.7
COL.COLO4_28015 Corchorus olitorius HOM05D006627 ORTHO05D007753 1.1e-78 299.7 1194 29.9
Gohir.A10G234800 Gossypium hirsutum HOM05D006627 ORTHO05D007753 3.4e-77 294.7 1202 29.8
MD07G1277900 Malus domestica HOM05D006627 ORTHO05D007753 1.3e-76 292.7 1283 28.8
Haze_00034 Corylus avellana HOM05D006627 ORTHO05D007753 2.2e-76 292.0 1294 29.8
Duzib084G0535 Durio zibethinus HOM05D006627 ORTHO05D007753 2.2e-76 292.0 1253 28.5
SalBow4G0794 Salvia bowleyana HOM05D006627 ORTHO05D007753 6.5e-76 290.4 1223 30.7
Gohir.D10G247200 Gossypium hirsutum HOM05D006627 ORTHO05D007753 2.1e-74 285.4 1200 29.6
Gorai.011G285600 Gossypium raimondii HOM05D006627 ORTHO05D007753 2.7e-74 285.0 1202 29.9
TWI23G0587 Tripterygium wilfordii HOM05D006627 ORTHO05D007753 6.1e-74 283.9 1252 28.8
MD01G1207000 Malus domestica HOM05D006627 ORTHO05D007753 6.7e-73 280.4 1332 28.5
MSTRG.8718 Avicennia marina HOM05D006627 ORTHO05D007753 2.8e-71 275.0 1237 28.1
Peaxi162Scf00618g00717 Petunia axillaris HOM05D006627 ORTHO05D007753 2.4e-70 271.9 1285 28.1
Sabra04G0052500 Salix brachista HOM05D006627 ORTHO05D007753 9.1e-70 270.0 1299 28.3
MSTRG.27091 Avicennia marina HOM05D006627 ORTHO05D007753 2.0e-69 268.9 1244 29.4
Ciclev10004200m.g Citrus clementina HOM05D006627 ORTHO05D007753 5.9e-69 267.3 1219 30.1
TWI14G0178 Tripterygium wilfordii HOM05D006627 ORTHO05D007753 2.2e-68 265.4 1235 27.9
Actinidia31835 Actinidia chinensis HOM05D006627 ORTHO05D007753 1.8e-65 255.8 1128 28.7
Dinv38916 Davidia involucrata HOM05D006627 ORTHO05D007753 1.8e-65 255.8 1415 28.1
PGSC0003DMG400010123 Solanum tuberosum HOM05D006627 ORTHO05D007753 1.5e-64 252.7 1152 28.2
TAR374G1318 Trochodendron aralioides HOM05D006627 ORTHO05D007753 2.0e-64 252.3 1413 28.5
MBI04_g35056_MAGBIO Magnolia biondii HOM05D006627 ORTHO05D007753 8.2e-63 246.9 1568 27.2
Potri.004G079000 Populus trichocarpa HOM05D006627 ORTHO05D007753 1.8e-62 245.7 1317 27.6
QL12p032277 Quercus lobata HOM05D006627 ORTHO05D007753 3.1e-62 245.0 1396 26.8
PSO478G1013 Papaver somniferum HOM05D006627 ORTHO05D007753 1.5e-61 242.7 1383 27.5
Potri.017G142600 Populus trichocarpa HOM05D006627 ORTHO05D007753 4.5e-61 241.1 1238 28.1
PSO782G1175 Papaver somniferum HOM05D006627 ORTHO05D007753 1.7e-60 239.2 1380 27.8
Atru.chr1.386 Acer truncatum HOM05D006627 ORTHO05D007753 2.5e-59 235.3 1166 27.7
Haze_08819 Corylus avellana HOM05D006627 ORTHO05D007753 4.2e-59 234.6 1408 28.6
Cfa012198 Carpinus fangiana HOM05D006627 ORTHO05D007753 9.4e-59 233.4 1392 28.3
CAN.G236.7 Capsicum annuum HOM05D006627 ORTHO05D007753 6.1e-58 230.7 1168 28.6
Dinv35242 Davidia involucrata HOM05D006627 ORTHO05D007753 2.3e-57 228.8 376 44.4
Solyc03g025150.4 Solanum lycopersicum HOM05D006627 ORTHO05D007753 3.0e-57 228.4 1142 28.3
Sabra17G0119400 Salix brachista HOM05D001410 ORTHO05D006840 5.2e-57 227.6 1256 28.2
Cpa.g.sc107.97 Carica papaya HOM05D006627 ORTHO05D007753 1.3e-55 223.0 1186 27.7
Sopen03g004000 Solanum pennellii HOM05D006627 ORTHO05D007753 3.1e-54 218.4 1133 28.1
Atru.chr1.369 Acer truncatum HOM05D006627 ORTHO05D007753 5.0e-52 211.1 1135 27.0
Atru.ctg97_1.2 Acer truncatum HOM05D006627 ORTHO05D007753 5.0e-52 211.1 1135 27.0
GSVIVG01019397001 Vitis vinifera HOM05D006627 ORTHO05D007753 1.9e-51 209.1 1279 26.0
Actinidia28362 Actinidia chinensis HOM05D006627 ORTHO05D007753 9.4e-51 206.8 1354 25.9
Hma1.2p1_0327F.1_g126380 Hydrangea macrophylla HOM05D006627 ORTHO05D007753 8.8e-49 200.3 638 33.4
ECA233G6261 Erigeron canadensis HOM05D006627 ORTHO05D007753 2.8e-47 195.3 1270 27.0
ECA232G3189 Erigeron canadensis HOM05D006627 ORTHO05D007753 8.3e-47 193.7 1217 26.2
Dinv35244 Davidia involucrata HOM05D006627 ORTHO05D007753 1.2e-45 189.9 221 51.6
Migut.F00307 Erythranthe guttata HOM05D006627 ORTHO05D007753 2.6e-40 172.2 1141 27.3
HanXRQChr13g0394821 Helianthus annuus HOM05D006627 ORTHO05D007753 1.2e-37 163.3 1267 26.5
Hund11448 Selenicereus undatus HOM05D006627 ORTHO05D007753 1.5e-32 146.4 1354 25.0
EL10Ac5g12810 Beta vulgaris HOM05D006627 ORTHO05D007753 2.6e-32 145.6 1297 26.1
Lsat_1_v5_gn_6_5180 Lactuca sativa HOM05D006627 ORTHO05D007753 7.5e-32 144.1 1290 27.4
EL10Ac5g12809 Beta vulgaris HOM05D006627 ORTHO05D007753 9.8e-32 143.7 1257 25.5
Dinv35243 Davidia involucrata HOM05D006627 ORTHO05D007753 1.7e-31 142.9 547 30.0
AUR62027265 Chenopodium quinoa HOM05D006627 ORTHO05D007753 1.8e-30 139.4 1301 26.2
AUR62010719 Chenopodium quinoa HOM05D006627 ORTHO05D007753 3.5e-29 135.2 1271 25.5
Ah.07g206700 Amaranthus hybridus HOM05D006627 ORTHO05D007753 1.3e-28 133.3 1405 25.2
Manes.02G019000 Manihot esculenta HOM05D006627 ORTHO05D007753 1.5e-27 129.8 1285 23.9
THA.LOC104800273 Tarenaya hassleriana HOM05D008661 ORTHO05D010872 1.5e-27 129.8 1195 26.3
EL10Ac3g05437 Beta vulgaris HOM05D006627 ORTHO05D007753 3.3e-27 128.6 1318 24.4
Ah.07g196520 Amaranthus hybridus HOM05D006627 ORTHO05D007753 1.0e-25 123.6 1210 25.5
AUR62031403 Chenopodium quinoa HOM05D006627 ORTHO05D007753 3.1e-25 122.1 1470 24.5
Lsat_1_v5_gn_9_57440 Lactuca sativa HOM05D006627 ORTHO05D007753 5.2e-25 121.3 279 35.1
AUR62027266 Chenopodium quinoa HOM05D006627 ORTHO05D007753 9.2e-22 110.5 1326 24.7
EL10Ac5g12811 Beta vulgaris HOM05D006627 ORTHO05D007753 2.7e-21 109.0 1415 24.0
Dinv37613 Davidia involucrata HOM05D006627 ORTHO05D007753 2.7e-21 109.0 1254 23.3
BcaB03g12481 Brassica carinata HOM05D008661 ORTHO05D010872 7.8e-21 107.5 1196 23.9
Sc22g0005410 Simmondsia chinensis HOM05D006627 ORTHO05D007753 1.3e-20 106.7 1326 25.9
HanXRQChr09g0252481 Helianthus annuus HOM05D029832 ORTHO05D007753 3.9e-20 105.1 1170 24.4
Atru.chr9.2147 Acer truncatum HOM05D006627 ORTHO05D007753 2.5e-19 102.4 1038 24.4
Aa31LG3G8880 Aethionema arabicum HOM05D008661 ORTHO05D010872 9.5e-19 100.5 1195 24.3
Lsat_1_v5_gn_2_131160 Lactuca sativa HOM05D029832 ORTHO05D007753 9.5e-19 100.5 282 34.4
Os08g0430000 Oryza sativa ssp. japonica HOM05D006627 ORTHO05D007753 8.1e-18 97.4 1412 23.3
Actinidia14583 Actinidia chinensis HOM05D006627 ORTHO05D007753 1.1e-17 97.1 339 30.4
unitig_46.g18802 Utricularia gibba HOM05D006627 ORTHO05D007753 5.2e-17 94.7 1170 25.0
THA.LOC104811963 Tarenaya hassleriana HOM05D008661 ORTHO05D010872 9.8e-16 90.5 178 39.9
ATR0661G323 Amborella trichopoda HOM05D006627 ORTHO05D007753 6.4e-15 87.8 1509 23.4
Atru.chr9.2148 Acer truncatum HOM05D006627 ORTHO05D007753 9.2e-14 84.0 185 38.9
CARHR233080 Cardamine hirsuta HOM05D008661 ORTHO05D010872 4.6e-13 81.6 250 34.0
CDE07G1237 Ceratophyllum demersum HOM05D006627 ORTHO05D007753 4.6e-13 81.6 802 24.4
Zm00001eb179470 Zea mays HOM05D006627 ORTHO05D007753 7.8e-13 80.9 206 33.5
AL8G26990 Arabidopsis lyrata HOM05D008661 ORTHO05D010872 1.0e-12 80.5 168 40.5
C08p09590 Brassica napus HOM05D008661 ORTHO05D010872 3.9e-12 78.6 318 27.7
A08p21040 Brassica napus HOM05D008661 ORTHO05D010872 5.1e-12 78.2 311 27.3
A08p21060 Brassica napus HOM05D008661 ORTHO05D010872 5.1e-12 78.2 318 27.4
BraA08t34056Z Brassica rapa HOM05D008661 ORTHO05D010872 5.1e-12 78.2 311 27.3
HanXRQChr14g0462471 Helianthus annuus HOM05D029832 ORTHO05D007753 6.6e-12 77.8 267 32.6
Sp7g23680 Schrenkiella parvula HOM05D008661 ORTHO05D010872 1.1e-11 77.0 246 30.9
BcaC07g38204 Brassica carinata HOM05D008661 ORTHO05D010872 1.9e-11 76.3 318 27.0
BolC8t48627H Brassica oleracea HOM05D008661 ORTHO05D010872 1.9e-11 76.3 318 27.0
AL7G27440 Arabidopsis lyrata HOM05D008661 ORTHO05D010872 5.6e-11 74.7 238 31.5
BcaB03g12479 Brassica carinata HOM05D008661 ORTHO05D010872 5.6e-11 74.7 570 26.8
Carub.0238s0001 Capsella rubella HOM05D008661 ORTHO05D010872 5.6e-11 74.7 232 30.6
AT5G52530 Arabidopsis thaliana HOM05D008661 ORTHO05D010872 7.3e-11 74.3 243 29.6
HPP92_025630 Vanilla planifolia HOM05D006627 ORTHO05D007753 9.5e-11 73.9 1304 21.9
Lsat_1_v5_gn_3_6981 Lactuca sativa HOM05D006627 ORTHO05D007753 2.8e-10 72.4 642 24.3
Thhalv10024596m.g Eutrema salsugineum HOM05D008661 ORTHO05D010872 4.0e-09 68.6 534 26.2
Sp6g14700 Schrenkiella parvula HOM05D008661 ORTHO05D010872 4.0e-09 68.6 313 28.1
HPP92_028524 Vanilla planifolia HOM05D061474 ORTHO05D007753 2.6e-08 65.9 253 31.6
HPP92_028535 Vanilla planifolia HOM05D061474 ORTHO05D007753 2.6e-08 65.9 253 31.6
ECA238G4706 Erigeron canadensis HOM05D029832 ORTHO05D007753 3.4e-08 65.5 386 27.2
Carub.0007s1533 Capsella rubella HOM05D008661 ORTHO05D010872 5.8e-08 64.7 230 30.4
TWI60G0847 Tripterygium wilfordii HOM05D006627 ORTHO05D007753 5.8e-08 64.7 339 28.3
CDE04G0350 Ceratophyllum demersum HOM05D006627 ORTHO05D007753 9.9e-08 63.9 1130 23.2
CARHR233070 Cardamine hirsuta HOM05D008661 ORTHO05D010872 2.2e-07 62.8 182 33.5
Nitab4.5_0006282g0040 Nicotiana tabacum HOM05D006627 ORTHO05D049381 6.4e-07 61.2 49 63.3
Nitab4.5_0003379g0060 Nicotiana tabacum HOM05D006627 ORTHO05D049381 3.2e-06 58.9 49 61.2
Carub.0008s1265 Capsella rubella HOM05D008661 ORTHO05D010872 4.1e-06 58.5 81 48.1


User provided reference genes

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