Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_020097 Daucus carota HOM05D022492 ORTHO05D025233 1.4e-75 286.2 142 100.0
DCAR_002296 Daucus carota HOM05D010700 ORTHO05D012225 5.0e-25 118.2 147 44.9
Peaxi162Scf00038g00002 Petunia axillaris HOM05D022492 ORTHO05D025233 1.0e-09 67.4 133 32.3
Rhsim01G0015900 Rhododendron simsii HOM05D010700 ORTHO05D012225 8.6e-09 64.3 115 31.3
PGSC0003DMG400011221 Solanum tuberosum HOM05D022492 ORTHO05D025233 3.3e-08 62.4 81 35.8
Glyma.06G245500 Glycine max HOM05D010700 ORTHO05D012225 1.6e-07 60.1 85 32.9
Carub.0001s4211 Capsella rubella HOM05D007923 ORTHO05D009651 2.8e-07 59.3 91 27.5
Migut.K01315 Erythranthe guttata HOM05D008521 ORTHO05D012225 4.7e-07 58.5 83 31.3
Thecc.09G158400 Theobroma cacao HOM05D002073 ORTHO05D001803 4.7e-07 58.5 117 30.8
Cpa.g.sc4.156 Carica papaya HOM05D007923 ORTHO05D009651 6.1e-07 58.2 128 28.1
TPR.G36159 Trifolium pratense HOM05D010700 ORTHO05D012225 6.1e-07 58.2 79 34.2
Solyc07g006210.1 Solanum lycopersicum HOM05D022492 ORTHO05D025233 8.0e-07 57.8 136 28.7
AL1G61300 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 1.0e-06 57.4 91 26.4
THA.LOC104799715 Tarenaya hassleriana HOM05D007923 ORTHO05D009651 1.4e-06 57.0 104 26.9
AT1G52970 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 2.3e-06 56.2 94 22.3
Nitab4.5_0001427g0010 Nicotiana tabacum HOM05D022492 ORTHO05D025233 2.3e-06 56.2 124 23.4
Carub.0008s0480 Capsella rubella HOM05D007923 ORTHO05D009651 3.0e-06 55.8 95 28.4
Lj3g0005293 Lotus japonicus HOM05D010700 ORTHO05D012225 3.0e-06 55.8 109 28.4
Sp1g39520 Schrenkiella parvula HOM05D007923 ORTHO05D009651 3.0e-06 55.8 112 24.1
TPR.G21868 Trifolium pratense HOM05D010700 ORTHO05D012225 3.0e-06 55.8 82 37.8
AT1G45190 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 5.2e-06 55.1 95 28.4
Thhalv10012072m.g Eutrema salsugineum HOM05D007923 ORTHO05D009651 5.2e-06 55.1 94 24.5
CARHR043170 Cardamine hirsuta HOM05D007923 ORTHO05D009651 6.8e-06 54.7 134 22.4
Psat0ss9438g0040 Pisum sativum HOM05D010700 ORTHO05D012225 6.8e-06 54.7 76 31.6


User provided reference genes

Program Settings