Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_020091 Daucus carota HOM05D006038 ORTHO05D007547 1.5e-203 712.6 355 100.0
Dinv42816 Davidia involucrata HOM05D006038 ORTHO05D007547 1.8e-140 503.1 347 70.9
Dinv43284 Davidia involucrata HOM05D006038 ORTHO05D007547 1.8e-140 503.1 347 70.9
CSS0049632 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.0e-135 485.7 356 69.4
CSS0019709 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 4.8e-133 478.4 356 68.0
CSS0006550 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 6.9e-132 474.6 358 67.9
TAR625G0922 Trochodendron aralioides HOM05D006038 ORTHO05D007547 7.1e-129 464.5 348 66.1
GSVIVG01023690001 Vitis vinifera HOM05D006038 ORTHO05D007547 8.7e-127 457.6 351 65.8
CANSAT11G1787 Cannabis sativa HOM05D006038 ORTHO05D007547 1.5e-126 456.8 353 62.6
MD10G1281400 Malus domestica HOM05D006038 ORTHO05D007547 1.5e-126 456.8 347 65.1
Aqoxy7G02400 Aquilegia oxysepala HOM05D006038 ORTHO05D007547 9.6e-126 454.1 349 64.8
CSS0009428 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 6.2e-125 451.4 342 67.5
QL02p094222 Quercus lobata HOM05D006038 ORTHO05D007547 6.9e-124 448.0 347 64.8
Nn8g40105 Nelumbo nucifera HOM05D006038 ORTHO05D007547 1.5e-123 446.8 354 63.6
Prupe.1G102000 Prunus persica HOM05D006038 ORTHO05D007547 2.0e-123 446.4 349 62.5
ECA236G4218 Erigeron canadensis HOM05D006038 ORTHO05D007547 1.9e-121 439.9 356 64.3
Glyma.02G206900 Glycine max HOM05D006038 ORTHO05D007547 7.1e-121 438.0 346 63.9
Thecc.09G154200 Theobroma cacao HOM05D006038 ORTHO05D007547 7.1e-121 438.0 362 61.6
PGSC0003DMG400011212 Solanum tuberosum HOM05D006038 ORTHO05D007547 9.3e-121 437.6 355 62.5
Sopen07g002150 Solanum pennellii HOM05D006038 ORTHO05D007547 1.3e-119 433.7 355 62.3
Lalb_Chr13g0300671 Lupinus albus HOM05D006038 ORTHO05D007547 1.8e-119 433.3 349 62.8
Lj4g0023904 Lotus japonicus HOM05D006038 ORTHO05D007547 2.3e-119 433.0 353 62.9
Cfa020781 Carpinus fangiana HOM05D006038 ORTHO05D007547 3.0e-119 432.6 350 63.1
RcHm_v2.0_Chr4g0405491 Rosa chinensis HOM05D006038 ORTHO05D007547 3.9e-119 432.2 347 61.7
CSS0029746 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 5.1e-119 431.8 356 64.3
Solyc07g006010.3 Solanum lycopersicum HOM05D006038 ORTHO05D007547 8.7e-119 431.0 357 62.2
Glyma.17G071100 Glycine max HOM05D006038 ORTHO05D007547 9.6e-118 427.6 346 63.3
Psat4g010160 Pisum sativum HOM05D006038 ORTHO05D007547 4.8e-117 425.2 353 62.3
Cpa.g.sc199.14 Carica papaya HOM05D006038 ORTHO05D007547 8.2e-117 424.5 353 62.0
FAN17G0258 Fragaria x ananassa HOM05D006038 ORTHO05D007547 8.2e-117 424.5 347 59.4
Hund08960 Selenicereus undatus HOM05D006038 ORTHO05D007547 8.2e-117 424.5 364 59.9
Haze_19138 Corylus avellana HOM05D006038 ORTHO05D007547 1.8e-116 423.3 376 59.8
Gohir.D05G008700 Gossypium hirsutum HOM05D006038 ORTHO05D007547 3.1e-116 422.5 359 61.3
Gorai.009G008900 Gossypium raimondii HOM05D006038 ORTHO05D007547 3.1e-116 422.5 359 61.3
EL10Ac8g18905 Beta vulgaris HOM05D006038 ORTHO05D007547 4.0e-116 422.2 355 62.8
Gohir.A05G007900 Gossypium hirsutum HOM05D006038 ORTHO05D007547 4.0e-116 422.2 359 60.7
FvH4_4g09770 Fragaria vesca HOM05D006038 ORTHO05D007547 9.0e-116 421.0 347 59.4
PSO170G4900 Papaver somniferum HOM05D006038 ORTHO05D007547 9.0e-116 421.0 349 61.3
CsaV3_2G007740 Cucumis sativus L. HOM05D006038 ORTHO05D007547 1.2e-115 420.6 355 61.1
TWI63G0196 Tripterygium wilfordii HOM05D006038 ORTHO05D007547 1.2e-115 420.6 357 58.5
FAN22G1283 Fragaria x ananassa HOM05D006038 ORTHO05D007547 1.5e-115 420.2 347 59.1
Lsat_1_v5_gn_8_64821 Lactuca sativa HOM05D006038 ORTHO05D007547 7.6e-115 417.9 337 63.5
PSO017G0013 Papaver somniferum HOM05D006038 ORTHO05D007547 7.6e-115 417.9 349 61.0
VMungo1215G1375 Vigna mungo HOM05D006038 ORTHO05D007547 1.0e-114 417.5 347 61.1
Ca_21155_v3 Cicer arietinum L. HOM05D006038 ORTHO05D007547 1.3e-114 417.2 351 61.8
MELO3C004111.2 Cucumis melo HOM05D006038 ORTHO05D007547 1.3e-114 417.2 347 61.4
Peaxi162Scf00563g00418 Petunia axillaris HOM05D006038 ORTHO05D007547 2.9e-114 416.0 356 59.6
Cc06_g14480 Coffea canephora HOM05D006038 ORTHO05D007547 3.8e-114 415.6 351 61.0
Manes.14G113700 Manihot esculenta HOM05D006038 ORTHO05D007547 3.8e-114 415.6 354 59.3
CSS0047764 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 8.4e-114 414.5 356 61.0
PGR114G0005 Punica granatum HOM05D006038 ORTHO05D007547 8.4e-114 414.5 361 59.3
PGR142G2424 Punica granatum HOM05D006038 ORTHO05D007547 8.4e-114 414.5 361 59.3
CiPaw.15G164200 Carya illinoinensis HOM05D006038 ORTHO05D007547 1.4e-113 413.7 351 61.3
Nitab4.5_0002809g0020 Nicotiana tabacum HOM05D006038 ORTHO05D007547 1.9e-113 413.3 375 57.6
Actinidia38659 Actinidia chinensis HOM05D006038 ORTHO05D007547 2.5e-113 412.9 361 58.7
FAN07G2585 Fragaria x ananassa HOM05D006038 ORTHO05D007547 3.2e-113 412.5 347 58.8
TPR.G22112 Trifolium pratense HOM05D006038 ORTHO05D007547 3.2e-113 412.5 356 60.1
CDE04G0171 Ceratophyllum demersum HOM05D006038 ORTHO05D007547 4.2e-113 412.1 352 57.7
Migut.J01393 Erythranthe guttata HOM05D006038 ORTHO05D007547 4.2e-113 412.1 361 59.6
HanXRQChr06g0179781 Helianthus annuus HOM05D006038 ORTHO05D007547 5.5e-113 411.8 357 59.1
Phvul.003G153400 Phaseolus vulgaris HOM05D006038 ORTHO05D007547 1.2e-112 410.6 347 60.5
Sed0013580 Sechium edule HOM05D006038 ORTHO05D007547 4.6e-112 408.7 357 58.8
SGA_v2.0_scaffold265G46074 Striga asiatica HOM05D006038 ORTHO05D007547 3.0e-111 406.0 372 57.3
CAN.G1190.21 Capsicum annuum HOM05D006038 ORTHO05D007547 6.7e-111 404.8 355 60.3
Medtr4g130280 Medicago truncatula HOM05D006038 ORTHO05D007547 1.5e-110 403.7 348 60.1
Rhsim03G0259500 Rhododendron simsii HOM05D006038 ORTHO05D007547 2.5e-110 402.9 351 61.0
THA.LOC104803556 Tarenaya hassleriana HOM05D006038 ORTHO05D007547 3.3e-110 402.5 355 56.9
BcaNung02736 Brassica carinata HOM05D006038 ORTHO05D007547 7.4e-110 401.4 355 59.4
AL7G21280 Arabidopsis lyrata HOM05D006038 ORTHO05D007547 9.7e-110 401.0 361 57.9
MSTRG.6162 Avicennia marina HOM05D006038 ORTHO05D007547 9.7e-110 401.0 349 60.5
MBI15_g26068_MAGBIO Magnolia biondii HOM05D006038 ORTHO05D007547 2.2e-109 399.8 330 63.3
AT4G30840 Arabidopsis thaliana HOM05D006038 ORTHO05D007547 2.4e-108 396.4 361 57.1
BraA03t15077Z Brassica rapa HOM05D006038 ORTHO05D007547 4.1e-108 395.6 355 58.3
Atru.chr7.352 Acer truncatum HOM05D006038 ORTHO05D007547 9.0e-108 394.4 363 59.2
CARHR238700 Cardamine hirsuta HOM05D006038 ORTHO05D007547 2.0e-107 393.3 359 56.8
Potri.006G180300 Populus trichocarpa HOM05D006038 ORTHO05D007547 3.4e-107 392.5 363 58.4
Ciclev10008825m.g Citrus clementina HOM05D006038 ORTHO05D007547 7.7e-107 391.3 348 60.6
Carub.0007s0972 Capsella rubella HOM05D006038 ORTHO05D007547 1.0e-106 391.0 361 56.2
ClCG02G014260 Citrullus lanatus HOM05D006038 ORTHO05D007547 2.2e-106 389.8 363 56.7
Sp7g28720 Schrenkiella parvula HOM05D006038 ORTHO05D007547 1.1e-105 387.5 360 56.4
Ah.14g084370 Amaranthus hybridus HOM05D001135 ORTHO05D001005 5.5e-105 385.2 335 60.0
Sabra06G0137300 Salix brachista HOM05D006038 ORTHO05D007547 1.0e-103 380.9 363 57.0
Nitab4.5_0001036g0170 Nicotiana tabacum HOM05D006038 ORTHO05D007547 8.8e-103 377.9 363 54.8
Aa31LG2G19530 Aethionema arabicum HOM05D006038 ORTHO05D007547 2.8e-101 372.9 361 55.4
ATR0580G061 Amborella trichopoda HOM05D006038 ORTHO05D007547 4.8e-101 372.1 353 53.5
C07p58240 Brassica napus HOM05D006038 ORTHO05D007547 1.1e-100 370.9 338 58.6
BolC7t46282H Brassica oleracea HOM05D006038 ORTHO05D007547 1.4e-100 370.5 338 58.6
A03p60370 Brassica napus HOM05D006038 ORTHO05D007547 2.6e-99 366.3 338 57.7
Sc14g0000990 Simmondsia chinensis HOM05D006038 ORTHO05D007547 3.8e-98 362.5 361 54.3
BcaNung01557 Brassica carinata HOM05D006038 ORTHO05D007547 6.5e-98 361.7 337 57.6
HPP92_020613 Vanilla planifolia HOM05D006038 ORTHO05D007547 4.2e-97 359.0 355 52.7
vmacro06051 Vaccinium macrocarpon HOM05D006038 ORTHO05D007547 7.9e-96 354.8 362 55.2
AUR62025374 Chenopodium quinoa HOM05D006038 ORTHO05D007547 3.7e-93 345.9 244 68.9
AUR62028377 Chenopodium quinoa HOM05D006038 ORTHO05D007547 8.2e-93 344.7 250 68.4
Eucgr.K03188 Eucalyptus grandis HOM05D006038 ORTHO05D007547 4.2e-89 332.4 332 51.2
Dinv41342 Davidia involucrata HOM05D006038 ORTHO05D007547 4.5e-83 312.4 228 69.3
Os08g0266600 Oryza sativa ssp. japonica HOM05D006038 ORTHO05D007547 6.5e-82 308.5 345 47.5
Zm00001eb177980 Zea mays HOM05D006038 ORTHO05D007547 4.2e-81 305.8 347 49.3
Thhalv10025548m.g Eutrema salsugineum HOM05D006038 ORTHO05D007547 2.6e-70 270.0 280 51.4
SMO367G0193 Selaginella moellendorffii HOM05D006038 ORTHO05D007547 5.7e-70 268.9 352 42.3
AagrBONN_evm.TU.Sc2ySwM_117.2538 Anthoceros agrestis HOM05D006038 ORTHO05D007547 2.8e-69 266.5 372 39.2
arahy.Tifrunner.gnm1.ann1.3R6I6F Arachis hypogaea HOM05D006038 ORTHO05D007547 1.1e-68 264.6 225 58.7
Oeu027617.1 Olea europaea HOM05D006038 ORTHO05D007547 1.5e-65 254.2 163 69.9
CSS0027410 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.1e-64 250.4 212 64.2
CSS0013086 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.8e-63 247.3 212 63.2
CSS0009266 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.2e-61 240.4 212 61.3
Lj7A464T42 Lonicera japonica HOM05D006038 ORTHO05D007547 1.6e-56 224.2 212 56.6
SHI18668 Sapria himalayana HOM05D006038 ORTHO05D007547 8.0e-56 221.9 312 42.9
Cfa020780 Carpinus fangiana HOM05D006038 ORTHO05D007547 1.0e-55 221.5 207 57.5
Lj7A464G38 Lonicera japonica HOM05D006038 ORTHO05D007547 1.5e-54 217.6 148 75.7
COL.COLO4_05400 Corchorus olitorius HOM05D006038 ORTHO05D007547 4.1e-52 209.5 205 53.2
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 1.5e-49 201.1 377 33.4
SEGI_08614 Sequoiadendron giganteum HOM05D006038 ORTHO05D007547 1.6e-43 181.0 138 58.0
A01p07320 Brassica napus HOM05D006038 ORTHO05D007547 7.8e-43 178.7 232 45.7
CSS0022095 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 6.6e-42 175.6 121 68.6
CSS0024276 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.6e-38 163.7 212 47.2
Pp3c6_28770 Physcomitrium patens HOM05D006038 ORTHO05D007547 3.1e-31 140.2 166 41.6
CSS0047172 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.4e-23 114.0 66 80.3
CSS0031036 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 9.9e-22 108.6 66 77.3
CSS0034156 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.9e-17 94.4 66 69.7
BcaNung03435 Brassica carinata HOM05D001147 ORTHO05D000823 7.6e-14 82.4 138 38.4
Cre02.g090600 Chlamydomonas reinhardtii HOM05D006038 ORTHO05D007547 2.1e-11 74.3 156 30.8
Zm00001eb124580 Zea mays HOM05D006038 ORTHO05D007547 3.5e-11 73.6 52 61.5
Zm00001eb253640 Zea mays HOM05D006038 ORTHO05D007547 8.7e-10 68.9 56 55.4
Zm00001eb038770 Zea mays HOM05D006038 ORTHO05D007547 1.5e-09 68.2 53 56.6
Zm00001eb046820 Zea mays HOM05D006038 ORTHO05D007547 1.5e-09 68.2 53 56.6
Zm00001eb051760 Zea mays HOM05D006038 ORTHO05D007547 1.5e-09 68.2 53 56.6
Zm00001eb369920 Zea mays HOM05D006038 ORTHO05D007547 4.3e-09 66.6 57 49.1
Zm00001eb021100 Zea mays HOM05D002913 ORTHO05D026003 5.8e-06 56.2 49 51.0
Zm00001eb156390 Zea mays HOM05D009386 ORTHO05D011419 5.8e-06 56.2 49 51.0
Zm00001eb343430 Zea mays HOM05D002913 ORTHO05D020952 5.8e-06 56.2 49 51.0
Zm00001eb354900 Zea mays HOM05D002913 ORTHO05D026003 5.8e-06 56.2 49 51.0


User provided reference genes

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