Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_020070 Daucus carota HOM05D007406 ORTHO05D009434 1.8e-117 426.0 222 100.0
TAR628G0119 Trochodendron aralioides HOM05D007406 ORTHO05D009434 4.5e-81 305.1 220 70.5
Cpa.g.sc160.29 Carica papaya HOM05D007406 ORTHO05D009434 2.9e-80 302.4 222 69.8
Thecc.08G083300 Theobroma cacao HOM05D007406 ORTHO05D009434 2.9e-80 302.4 222 70.3
Prupe.1G418200 Prunus persica HOM05D007406 ORTHO05D009434 5.0e-80 301.6 223 70.9
MELO3C016844.2 Cucumis melo HOM05D007406 ORTHO05D009434 2.5e-79 299.3 220 71.4
Duzib041G0608 Durio zibethinus HOM05D007406 ORTHO05D009434 3.2e-79 298.9 222 70.3
Manes.18G050400 Manihot esculenta HOM05D007406 ORTHO05D009434 4.2e-79 298.5 222 71.6
HanXRQChr08g0226371 Helianthus annuus HOM05D007406 ORTHO05D009434 5.5e-79 298.1 222 69.8
Potri.002G114400 Populus trichocarpa HOM05D007406 ORTHO05D009434 1.2e-78 297.0 223 70.0
RcHm_v2.0_Chr6g0310141 Rosa chinensis HOM05D007406 ORTHO05D009434 1.2e-78 297.0 223 70.0
TWI36G1291 Tripterygium wilfordii HOM05D007406 ORTHO05D009434 1.2e-78 297.0 222 68.0
TPR.G13149 Trifolium pratense HOM05D007406 ORTHO05D009434 2.1e-78 296.2 220 69.5
Atru.chr13.879 Acer truncatum HOM05D007406 ORTHO05D009434 2.7e-78 295.8 221 68.8
Ca_06987_v3 Cicer arietinum L. HOM05D007406 ORTHO05D009434 3.6e-78 295.4 220 69.1
FAN24G2334 Fragaria x ananassa HOM05D007406 ORTHO05D009434 3.6e-78 295.4 223 68.6
MD15G1064200 Malus domestica HOM05D007406 ORTHO05D009434 3.6e-78 295.4 220 72.3
Ciclev10002365m.g Citrus clementina HOM05D007406 ORTHO05D009434 4.7e-78 295.0 222 67.1
vmacro21408 Vaccinium macrocarpon HOM05D007406 ORTHO05D009434 8.0e-78 294.3 245 64.9
Solyc04g077450.3 Solanum lycopersicum HOM05D007406 ORTHO05D009434 1.0e-77 293.9 219 71.7
Sopen04g031040 Solanum pennellii HOM05D007406 ORTHO05D009434 1.0e-77 293.9 219 71.2
Lj5g0009058 Lotus japonicus HOM05D007406 ORTHO05D009434 1.8e-77 293.1 222 68.5
VMungo0647G2305 Vigna mungo HOM05D007406 ORTHO05D009434 2.3e-77 292.7 222 66.7
Prupe.6G207800 Prunus persica HOM05D007406 ORTHO05D009434 3.0e-77 292.4 204 73.0
CiPaw.08G053000 Carya illinoinensis HOM05D007406 ORTHO05D009434 5.2e-77 291.6 222 69.4
FvH4_2g32510 Fragaria vesca HOM05D007406 ORTHO05D009434 5.2e-77 291.6 223 67.7
Actinidia10229 Actinidia chinensis HOM05D007406 ORTHO05D009434 8.8e-77 290.8 200 73.0
CAN.G416.4 Capsicum annuum HOM05D007406 ORTHO05D009434 8.8e-77 290.8 222 69.4
ClCG05G017610 Citrullus lanatus HOM05D007406 ORTHO05D009434 8.8e-77 290.8 220 68.6
Aqoxy6G02928 Aquilegia oxysepala HOM05D007406 ORTHO05D009434 1.1e-76 290.4 220 70.9
Cfa013727 Carpinus fangiana HOM05D007406 ORTHO05D009434 2.0e-76 289.7 222 68.9
Medtr1g017290 Medicago truncatula HOM05D007406 ORTHO05D009434 2.0e-76 289.7 219 67.1
Glyma.14G090300 Glycine max HOM05D007406 ORTHO05D009434 5.7e-76 288.1 222 67.1
Eucgr.F02216 Eucalyptus grandis HOM05D007406 ORTHO05D009434 1.3e-75 287.0 222 67.6
Hma1.2p1_1926F.1_g307730 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 1.3e-75 287.0 220 68.6
CANSAT25G0188 Cannabis sativa HOM05D007406 ORTHO05D009434 1.7e-75 286.6 222 67.6
Lalb_Chr14g0368031 Lupinus albus HOM05D007406 ORTHO05D009434 2.8e-75 285.8 222 68.0
Cc10_g07740 Coffea canephora HOM05D007406 ORTHO05D009434 3.7e-75 285.4 222 65.8
Gohir.A02G079900 Gossypium hirsutum HOM05D007406 ORTHO05D009434 3.7e-75 285.4 222 68.0
PGR031G1333 Punica granatum HOM05D007406 ORTHO05D009434 4.8e-75 285.0 230 67.0
Nn6g34540 Nelumbo nucifera HOM05D007406 ORTHO05D009434 6.3e-75 284.6 222 66.7
Phvul.001G031500 Phaseolus vulgaris HOM05D007406 ORTHO05D009434 6.3e-75 284.6 226 63.3
Carub.0003s1158 Capsella rubella HOM05D007406 ORTHO05D009434 8.2e-75 284.3 208 68.3
ECA247G1434 Erigeron canadensis HOM05D007406 ORTHO05D009434 1.4e-74 283.5 223 67.3
FAN27G1006 Fragaria x ananassa HOM05D007406 ORTHO05D009434 1.4e-74 283.5 222 65.3
arahy.Tifrunner.gnm1.ann1.GL3N7R Arachis hypogaea HOM05D007406 ORTHO05D009434 1.8e-74 283.1 222 65.3
Lsat_1_v5_gn_1_721 Lactuca sativa HOM05D007406 ORTHO05D009434 2.4e-74 282.7 206 71.4
Thhalv10021516m.g Eutrema salsugineum HOM05D007406 ORTHO05D009434 3.1e-74 282.3 219 67.6
PSO017G2718 Papaver somniferum HOM05D007406 ORTHO05D009434 3.1e-74 282.3 222 68.9
Gohir.D02G087800 Gossypium hirsutum HOM05D007406 ORTHO05D009434 4.1e-74 282.0 222 67.6
Gorai.005G098400 Gossypium raimondii HOM05D007406 ORTHO05D009434 5.3e-74 281.6 222 67.1
Sed0009876 Sechium edule HOM05D007406 ORTHO05D009434 7.0e-74 281.2 220 66.4
AL3G23880 Arabidopsis lyrata HOM05D007406 ORTHO05D009434 1.2e-73 280.4 208 67.8
BraA05t22509Z Brassica rapa HOM05D007406 ORTHO05D009434 2.0e-73 279.6 222 66.7
BolC5t34221H Brassica oleracea HOM05D007406 ORTHO05D009434 2.7e-73 279.3 222 66.7
AT3G12210 Arabidopsis thaliana HOM05D007406 ORTHO05D009434 4.5e-73 278.5 208 67.3
Sp3g10440 Schrenkiella parvula HOM05D007406 ORTHO05D009434 5.9e-73 278.1 222 64.9
Haze_22374 Corylus avellana HOM05D007406 ORTHO05D009434 1.7e-72 276.6 250 61.2
Migut.N02801 Erythranthe guttata HOM05D007406 ORTHO05D009434 2.9e-72 275.8 220 64.5
THA.LOC104799833 Tarenaya hassleriana HOM05D007406 ORTHO05D009434 6.5e-72 274.6 222 65.8
AUR62034986 Chenopodium quinoa HOM05D007406 ORTHO05D009434 8.5e-72 274.2 222 66.2
ATR0739G008 Amborella trichopoda HOM05D007406 ORTHO05D009434 3.2e-71 272.3 220 64.1
arahy.Tifrunner.gnm1.ann1.V0H9ZK Arachis hypogaea HOM05D007406 ORTHO05D009434 6.1e-70 268.1 223 62.8
Nitab4.5_0007871g0020 Nicotiana tabacum HOM05D007406 ORTHO05D009434 1.4e-69 266.9 219 67.6
Hund05268 Selenicereus undatus HOM05D007406 ORTHO05D009434 1.2e-68 263.8 218 64.2
MSTRG.22203 Avicennia marina HOM05D007406 ORTHO05D009434 1.5e-68 263.5 220 62.3
Ah.05g166920 Amaranthus hybridus HOM05D007406 ORTHO05D009434 3.4e-68 262.3 222 62.6
SalBow2G1084 Salvia bowleyana HOM05D007406 ORTHO05D009434 7.5e-68 261.2 222 60.4
CSS0019783 Camellia sinensis var. sinensis HOM05D007406 ORTHO05D009434 1.7e-67 260.0 171 78.4
Rhsim06G0065300 Rhododendron simsii HOM05D007406 ORTHO05D009434 3.7e-67 258.8 171 77.2
Aa31LG11G6470 Aethionema arabicum HOM05D007406 ORTHO05D009434 4.8e-67 258.5 222 61.3
MBI16_g35726_MAGBIO Magnolia biondii HOM05D007406 ORTHO05D009434 8.3e-67 257.7 239 58.6
PSO170G2494 Papaver somniferum HOM05D007406 ORTHO05D009434 2.4e-66 256.1 187 72.2
CsaV3_4G035340 Cucumis sativus L. HOM05D007406 ORTHO05D009434 1.6e-65 253.4 171 75.4
EL10Ac1g02342 Beta vulgaris HOM05D007406 ORTHO05D009434 2.9e-64 249.2 219 62.1
BcaC05g29272 Brassica carinata HOM05D007406 ORTHO05D009434 3.8e-64 248.8 171 71.3
Sabra02G0090500 Salix brachista HOM05D000717 ORTHO05D000555 8.5e-64 247.7 171 73.1
Lj4C76T9 Lonicera japonica HOM05D007406 ORTHO05D009434 1.6e-62 243.4 159 80.5
SGA_v2.0_scaffold28G11843 Striga asiatica HOM05D007406 ORTHO05D009434 1.6e-62 243.4 211 61.1
COL.COLO4_28451 Corchorus olitorius HOM05D007406 ORTHO05D009434 1.4e-61 240.4 197 63.5
Zm00001eb215640 Zea mays HOM05D007406 ORTHO05D009434 3.0e-61 239.2 217 59.9
Oeu053653.1 Olea europaea HOM05D007406 ORTHO05D009434 5.7e-60 235.0 174 66.1
GSVIVG01009288001 Vitis vinifera HOM05D007406 ORTHO05D009434 5.9e-57 224.9 157 78.3
Pp3c10_2700 Physcomitrium patens HOM05D007406 ORTHO05D009434 5.6e-55 218.4 227 52.4
SEGI_23576 Sequoiadendron giganteum HOM05D007406 ORTHO05D009434 1.2e-54 217.2 232 52.6
Peaxi162Scf01161g00328 Petunia axillaris HOM05D007406 ORTHO05D009434 4.7e-54 215.3 219 55.3
CARHR086780 Cardamine hirsuta HOM05D007406 ORTHO05D009434 4.0e-53 212.2 142 73.2
CDE04G3630 Ceratophyllum demersum HOM05D007406 ORTHO05D009434 9.2e-50 201.1 144 68.1
AUR62039350 Chenopodium quinoa HOM05D007406 ORTHO05D009434 3.3e-47 192.6 155 69.7
Nitab4.5_0001494g0090 Nicotiana tabacum HOM05D007406 ORTHO05D009434 1.3e-43 180.6 219 50.2
A05p37120 Brassica napus HOM05D007406 ORTHO05D004372 1.4e-42 177.2 147 68.7
C05p55550 Brassica napus HOM05D007406 ORTHO05D004372 1.9e-42 176.8 147 68.0
Sc15g0005330 Simmondsia chinensis HOM05D007406 ORTHO05D009434 2.7e-41 172.9 140 61.4
Aa31sc118G30 Aethionema arabicum HOM05D007406 ORTHO05D009434 3.8e-27 125.9 95 69.5
Hma1.2p1_1926F.1_g307740 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 7.1e-26 121.7 83 75.9
Hma1.2p1_2378F.1_g320925 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 7.1e-26 121.7 83 75.9
MCO14G094 Micromonas commoda HOM05D007406 ORTHO05D009434 4.0e-21 105.9 218 36.7
Dinv39200 Davidia involucrata HOM05D007406 ORTHO05D009434 2.2e-19 100.1 73 69.9
Psat0s3650g0120 Pisum sativum HOM05D007406 ORTHO05D009434 1.9e-18 97.1 59 79.7
Sc15g0005340 Simmondsia chinensis HOM05D007406 ORTHO05D009434 2.8e-14 83.2 78 55.1
Os03g0728600 Oryza sativa ssp. japonica HOM05D007406 ORTHO05D009434 5.3e-13 79.0 77 45.5
PRCOL_00000641 Prasinoderma coloniale HOM05D007406 ORTHO05D009434 2.0e-12 77.0 167 36.5
Cre10.g466400 Chlamydomonas reinhardtii HOM05D007406 ORTHO05D009434 2.2e-11 73.6 157 35.0


User provided reference genes

Program Settings