Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_020029 Daucus carota HOM05D000650 ORTHO05D010020 2.2e-51 205.3 100 100.0
vmacro21359 Vaccinium macrocarpon HOM05D000650 ORTHO05D010020 1.1e-15 86.7 93 45.2
Actinidia19250 Actinidia chinensis HOM05D000650 ORTHO05D010020 4.3e-15 84.7 85 47.1
Actinidia10270 Actinidia chinensis HOM05D000650 ORTHO05D010020 1.3e-14 83.2 85 45.9
Lj4A86T98 Lonicera japonica HOM05D000650 ORTHO05D010020 2.1e-14 82.4 89 47.2
Actinidia33565 Actinidia chinensis HOM05D000650 ORTHO05D010020 3.7e-14 81.6 83 45.8
Rhsim05G0206100 Rhododendron simsii HOM05D000650 ORTHO05D010020 2.4e-13 79.0 93 41.9
Dinv42596 Davidia involucrata HOM05D000650 ORTHO05D010020 8.4e-11 70.5 77 46.8
Rhsim06G0070000 Rhododendron simsii HOM05D000650 ORTHO05D010020 1.1e-10 70.1 95 38.9
CSS0045659 Camellia sinensis var. sinensis HOM05D000650 ORTHO05D010020 1.9e-10 69.3 95 38.9
GSVIVG01009203001 Vitis vinifera HOM05D000650 ORTHO05D000735 5.5e-10 67.8 90 40.0
CSS0038870 Camellia sinensis var. sinensis HOM05D000650 ORTHO05D010020 9.3e-10 67.0 94 38.3
COL.COLO4_35274 Corchorus olitorius HOM05D000650 ORTHO05D010020 1.6e-09 66.2 66 48.5
Duzib116G0074 Durio zibethinus HOM05D000650 ORTHO05D010020 3.5e-09 65.1 66 47.0
Potri.005G152100 Populus trichocarpa HOM05D000650 ORTHO05D010020 3.5e-09 65.1 92 37.0
Duzib041G0043 Durio zibethinus HOM05D000650 ORTHO05D010020 4.6e-09 64.7 66 48.5
Nitab4.5_0000771g0040 Nicotiana tabacum HOM05D000650 ORTHO05D010020 4.6e-09 64.7 89 38.2
Gohir.A06G031000 Gossypium hirsutum HOM05D000650 ORTHO05D010020 7.9e-09 63.9 66 50.0
Gohir.D06G030200 Gossypium hirsutum HOM05D000650 ORTHO05D010020 7.9e-09 63.9 66 50.0
Gorai.010G033200 Gossypium raimondii HOM05D000650 ORTHO05D010020 7.9e-09 63.9 66 50.0
Nitab4.5_0009446g0020 Nicotiana tabacum HOM05D000650 ORTHO05D010020 7.9e-09 63.9 89 39.3
Thecc.08G073600 Theobroma cacao HOM05D000650 ORTHO05D010020 5.1e-08 61.2 66 43.9
ATR0564G348 Amborella trichopoda HOM05D000650 ORTHO05D000735 8.7e-08 60.5 42 61.9
Haze_01807 Corylus avellana HOM05D000650 ORTHO05D010020 1.1e-07 60.1 68 45.6
MBI02_g23679_MAGBIO Magnolia biondii HOM05D000650 ORTHO05D000735 1.1e-07 60.1 42 59.5
Manes.05G189300 Manihot esculenta HOM05D000650 ORTHO05D010020 3.3e-07 58.5 95 32.6
Aqoxy3G00681 Aquilegia oxysepala HOM05D000650 ORTHO05D000735 7.4e-07 57.4 69 40.6
CDE08G0215 Ceratophyllum demersum HOM05D000650 ORTHO05D000735 7.4e-07 57.4 86 39.5
CDE02G1990 Ceratophyllum demersum HOM05D000650 ORTHO05D000735 1.3e-06 56.6 86 38.4
arahy.Tifrunner.gnm1.ann1.BQY73P Arachis hypogaea HOM05D000650 ORTHO05D000735 1.6e-06 56.2 83 37.3
arahy.Tifrunner.gnm1.ann1.FZY3XY Arachis hypogaea HOM05D000650 ORTHO05D000735 1.6e-06 56.2 81 38.3
CAN.G193.7 Capsicum annuum HOM05D000650 ORTHO05D010020 1.6e-06 56.2 70 40.0
Cpa.g.sc21.40 Carica papaya HOM05D000650 ORTHO05D010020 1.6e-06 56.2 68 42.6
MBI05_g35459_MAGBIO Magnolia biondii HOM05D000650 ORTHO05D000735 1.6e-06 56.2 69 40.6
Hma1.2p1_0104F.1_g050050 Hydrangea macrophylla HOM05D000650 ORTHO05D000735 2.1e-06 55.8 69 42.0
HPP92_016913 Vanilla planifolia HOM05D000650 ORTHO05D000735 2.1e-06 55.8 41 58.5
QL09p018396 Quercus lobata HOM05D000650 ORTHO05D010020 2.8e-06 55.5 74 43.2
Glyma.06G192700 Glycine max HOM05D000650 ORTHO05D000735 3.7e-06 55.1 52 48.1
Prupe.1G535200 Prunus persica HOM05D000650 ORTHO05D010020 3.7e-06 55.1 44 52.3
TAR371G0018 Trochodendron aralioides HOM05D001645 ORTHO05D000735 3.7e-06 55.1 69 42.0
Glyma.04G171200 Glycine max HOM05D000650 ORTHO05D000735 4.8e-06 54.7 69 43.5
Glyma.05G027700 Glycine max HOM05D000650 ORTHO05D000735 4.8e-06 54.7 81 37.0
Glyma.17G098800 Glycine max HOM05D000650 ORTHO05D000735 4.8e-06 54.7 81 37.0
Medtr4g108350 Medicago truncatula HOM05D000650 ORTHO05D000735 4.8e-06 54.7 81 34.6
Nitab4.5_0000131g0020 Nicotiana tabacum HOM05D000650 ORTHO05D010020 4.8e-06 54.7 89 37.1
TAR625G0784 Trochodendron aralioides HOM05D000650 ORTHO05D010020 4.8e-06 54.7 81 38.3
vmacro17556 Vaccinium macrocarpon HOM05D000650 ORTHO05D000735 4.8e-06 54.7 69 42.0
Ca_21830_v3 Cicer arietinum L. HOM05D000650 ORTHO05D000735 6.2e-06 54.3 81 35.8
Eucgr.B00469 Eucalyptus grandis HOM05D000650 ORTHO05D000735 6.2e-06 54.3 81 34.6
Nn4g23125 Nelumbo nucifera HOM05D000650 ORTHO05D000735 6.2e-06 54.3 81 37.0
Solyc04g076610.3 Solanum lycopersicum HOM05D000650 ORTHO05D010020 6.2e-06 54.3 52 48.1
GSVIVG01008026001 Vitis vinifera HOM05D000650 ORTHO05D000735 6.2e-06 54.3 69 39.1
CAN.G407.115 Capsicum annuum HOM05D000650 ORTHO05D000735 8.2e-06 53.9 82 37.8
Dinv19945 Davidia involucrata HOM05D000650 ORTHO05D000735 8.2e-06 53.9 85 36.5
Rhsim08G0157100 Rhododendron simsii HOM05D000650 ORTHO05D000735 8.2e-06 53.9 69 40.6
TPR.G34737 Trifolium pratense HOM05D000650 ORTHO05D000735 8.2e-06 53.9 81 34.6


User provided reference genes

Program Settings