Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_020000 Daucus carota HOM05D012822 ORTHO05D177058 7.1e-108 394.4 278 100.0
DCAR_019866 Daucus carota HOM05D012822 ORTHO05D176266 1.7e-45 187.2 159 66.0
DCAR_029108 Daucus carota HOM05D012822 ORTHO05D177385 6.6e-29 132.1 124 58.9
DCAR_029559 Daucus carota HOM05D012822 ORTHO05D176008 6.6e-13 79.0 153 35.9
DCAR_029558 Daucus carota HOM05D012822 ORTHO05D176177 1.5e-12 77.8 153 35.9
DCAR_031624 Daucus carota HOM05D012822 ORTHO05D176708 5.6e-12 75.9 153 36.6
DCAR_029560 Daucus carota HOM05D012822 ORTHO05D178574 3.6e-11 73.2 158 34.2
DCAR_006355 Daucus carota HOM05D012822 ORTHO05D177086 8.0e-11 72.0 161 36.6
Lj1C280T0 Lonicera japonica HOM05D000244 ORTHO05D000179 1.4e-10 71.2 134 37.3
Prupe.4G266900 Prunus persica HOM05D000244 ORTHO05D000179 5.2e-10 69.3 192 33.9
Actinidia06963 Actinidia chinensis HOM05D000244 ORTHO05D000179 6.8e-10 68.9 152 36.8
QL01p017209 Quercus lobata HOM05D000244 ORTHO05D000179 2.6e-09 67.0 154 34.4
Actinidia16382 Actinidia chinensis HOM05D000244 ORTHO05D000179 5.8e-09 65.9 160 35.0
Dinv05106 Davidia involucrata HOM05D000244 ORTHO05D000179 9.8e-09 65.1 136 39.0
Dinv36169 Davidia involucrata HOM05D000244 ORTHO05D000179 9.8e-09 65.1 154 33.8
Hma1.2p1_3091F.1_g332540 Hydrangea macrophylla HOM05D000244 ORTHO05D000179 9.8e-09 65.1 154 33.1
MD03G1166300 Malus domestica HOM05D000244 ORTHO05D000179 1.7e-08 64.3 100 38.0
Atru.chr3.2755 Acer truncatum HOM05D000244 ORTHO05D000179 6.4e-08 62.4 154 34.4
Aa31LG7G5060 Aethionema arabicum HOM05D000244 ORTHO05D000179 6.4e-08 62.4 97 39.2
ClCG03G012590 Citrullus lanatus HOM05D000244 ORTHO05D000179 8.3e-08 62.0 156 35.3
Hma1.2p1_0039F.1_g024410 Hydrangea macrophylla HOM05D000244 ORTHO05D000179 8.3e-08 62.0 137 38.7
MD11G1193900 Malus domestica HOM05D000244 ORTHO05D000179 8.3e-08 62.0 186 29.6
Nn2g14819 Nelumbo nucifera HOM05D000244 ORTHO05D000179 8.3e-08 62.0 147 36.7
FvH4_3g27860 Fragaria vesca HOM05D000244 ORTHO05D000179 1.1e-07 61.6 150 36.0
FAN11G3244 Fragaria x ananassa HOM05D000244 ORTHO05D000179 1.1e-07 61.6 150 36.0
RcHm_v2.0_Chr5g0050611 Rosa chinensis HOM05D000244 ORTHO05D000179 1.1e-07 61.6 152 34.9
Sed0005110 Sechium edule HOM05D000244 ORTHO05D000179 1.4e-07 61.2 141 36.9
TAR633G1982 Trochodendron aralioides HOM05D000244 ORTHO05D000179 1.9e-07 60.8 157 31.8
FAN16G0530 Fragaria x ananassa HOM05D000244 ORTHO05D000179 2.4e-07 60.5 150 34.7
Oeu049766.1 Olea europaea HOM05D000244 ORTHO05D004919 2.4e-07 60.5 138 29.0
Oeu049767.1 Olea europaea HOM05D000244 ORTHO05D004919 2.4e-07 60.5 138 29.0
Prupe.2G239000 Prunus persica HOM05D000244 ORTHO05D000179 2.4e-07 60.5 138 35.5
Lj6g0017012 Lotus japonicus HOM05D000244 ORTHO05D000179 3.2e-07 60.1 144 36.8
ClCG07G003540 Citrullus lanatus HOM05D000244 ORTHO05D000179 4.1e-07 59.7 144 34.0
Migut.N02869 Erythranthe guttata HOM05D000244 ORTHO05D004919 4.1e-07 59.7 143 28.7
CiPaw.13G151100 Carya illinoinensis HOM05D000244 ORTHO05D000179 5.4e-07 59.3 156 35.3
DCAR_006365 Daucus carota HOM05D012822 ORTHO05D175367 5.4e-07 59.3 121 33.9
Ah.16g102580 Amaranthus hybridus HOM05D000244 ORTHO05D000179 7.1e-07 58.9 138 36.2
Haze_23214 Corylus avellana HOM05D000244 ORTHO05D000179 7.1e-07 58.9 92 43.5
VMungo0540G2165 Vigna mungo HOM05D000244 ORTHO05D000179 7.1e-07 58.9 155 32.9
Cpa.g.sc426.2 Carica papaya HOM05D000244 ORTHO05D000179 9.2e-07 58.5 142 33.8
DCAR_009569 Daucus carota HOM05D000244 ORTHO05D004919 9.2e-07 58.5 140 30.7
CSS0036343 Camellia sinensis var. sinensis HOM05D000244 ORTHO05D000179 1.2e-06 58.2 154 33.1
CANSAT54G1689 Cannabis sativa HOM05D000244 ORTHO05D000179 1.2e-06 58.2 108 37.0
AUR62012131 Chenopodium quinoa HOM05D000244 ORTHO05D000179 1.2e-06 58.2 138 34.8
Ca_05622_v3 Cicer arietinum L. HOM05D000244 ORTHO05D000179 1.2e-06 58.2 147 31.3
Migut.F00755 Erythranthe guttata HOM05D000244 ORTHO05D000179 1.2e-06 58.2 138 33.3
HanXRQChr10g0278211 Helianthus annuus HOM05D000244 ORTHO05D004919 1.2e-06 58.2 113 37.2
PGR044G2235 Punica granatum HOM05D000244 ORTHO05D000179 1.2e-06 58.2 137 33.6
QL08p061144 Quercus lobata HOM05D000244 ORTHO05D000179 1.2e-06 58.2 127 33.9
BcaB02g07680 Brassica carinata HOM05D000244 ORTHO05D000179 1.6e-06 57.8 126 36.5
Cc02_g07480 Coffea canephora HOM05D000244 ORTHO05D000179 1.6e-06 57.8 116 35.3
ECA246G0984 Erigeron canadensis HOM05D000244 ORTHO05D000002 1.6e-06 57.8 116 31.0
Eucgr.D02447 Eucalyptus grandis HOM05D000244 ORTHO05D000179 1.6e-06 57.8 107 37.4
MBI13_g42344_MAGBIO Magnolia biondii HOM05D000244 ORTHO05D000179 1.6e-06 57.8 165 33.3
Psat5g123280 Pisum sativum HOM05D000244 ORTHO05D000179 1.6e-06 57.8 144 34.7
Sabra04G0140600 Salix brachista HOM05D000244 ORTHO05D050515 1.6e-06 57.8 155 32.3
Actinidia02926 Actinidia chinensis HOM05D003384 ORTHO05D005024 2.1e-06 57.4 100 38.0
BcaC08g44742 Brassica carinata HOM05D000244 ORTHO05D000179 2.1e-06 57.4 125 35.2
C06p22780 Brassica napus HOM05D000244 ORTHO05D000179 2.1e-06 57.4 125 35.2
AUR62040705 Chenopodium quinoa HOM05D000244 ORTHO05D000179 2.1e-06 57.4 138 34.8
Haze_17111 Corylus avellana HOM05D000244 ORTHO05D000179 2.1e-06 57.4 154 33.8
Glyma.06G014100 Glycine max HOM05D000244 ORTHO05D000179 2.1e-06 57.4 149 36.2
Glyma.11G221200 Glycine max HOM05D000244 ORTHO05D000179 2.1e-06 57.4 144 34.7
Lj5g0007165 Lotus japonicus HOM05D000244 ORTHO05D000179 2.1e-06 57.4 163 30.1
Oeu031355.1 Olea europaea HOM05D000244 ORTHO05D000179 2.1e-06 57.4 138 32.6
EL10Ac2g04707 Beta vulgaris HOM05D000244 ORTHO05D000179 2.7e-06 57.0 138 34.1
MELO3C023881.2 Cucumis melo HOM05D000244 ORTHO05D000179 2.7e-06 57.0 144 34.7
Glyma.18G036200 Glycine max HOM05D000244 ORTHO05D000179 2.7e-06 57.0 144 34.7
Nn7g36703 Nelumbo nucifera HOM05D000244 ORTHO05D004919 2.7e-06 57.0 139 34.5
Oeu001503.1 Olea europaea HOM05D000244 ORTHO05D000179 2.7e-06 57.0 151 31.1
Sabra02G0002700 Salix brachista HOM05D000244 ORTHO05D000179 2.7e-06 57.0 154 34.4
MSTRG.27367 Avicennia marina HOM05D000244 ORTHO05D000179 3.5e-06 56.6 138 34.8
CANSAT56G3805 Cannabis sativa HOM05D000244 ORTHO05D000179 3.5e-06 56.6 133 36.1
Cfa001432 Carpinus fangiana HOM05D000244 ORTHO05D000179 3.5e-06 56.6 154 33.1
CsaV3_5G008290 Cucumis sativus L. HOM05D000244 ORTHO05D000179 3.5e-06 56.6 144 34.7
Oeu038982.1 Olea europaea HOM05D000244 ORTHO05D000179 3.5e-06 56.6 137 32.1
Rhsim04G0188500 Rhododendron simsii HOM05D000244 ORTHO05D000179 3.5e-06 56.6 129 33.3
Thecc.08G098800 Theobroma cacao HOM05D000244 ORTHO05D000179 3.5e-06 56.6 135 37.8
Atru.chr13.43 Acer truncatum HOM05D000244 ORTHO05D000179 4.6e-06 56.2 149 33.6
Ah.10g036990 Amaranthus hybridus HOM05D000244 ORTHO05D000179 4.6e-06 56.2 115 36.5
CSS0024913 Camellia sinensis var. sinensis HOM05D000244 ORTHO05D004919 4.6e-06 56.2 142 29.6
Ciclev10016163m.g Citrus clementina HOM05D000244 ORTHO05D000179 4.6e-06 56.2 150 32.0
MELO3C029353.2 Cucumis melo HOM05D000244 ORTHO05D000179 4.6e-06 56.2 110 37.3
HanXRQChr09g0252801 Helianthus annuus HOM05D000244 ORTHO05D000179 4.6e-06 56.2 98 37.8
Lj1P942T31 Lonicera japonica HOM05D000244 ORTHO05D000179 4.6e-06 56.2 144 32.6
Peaxi162Scf00164g00126 Petunia axillaris HOM05D000244 ORTHO05D000179 4.6e-06 56.2 166 33.1
GSVIVG01016497001 Vitis vinifera HOM05D000244 ORTHO05D000179 4.6e-06 56.2 148 31.8
GSVIVG01027625001 Vitis vinifera HOM05D000244 ORTHO05D000179 4.6e-06 56.2 117 35.0
Aqoxy1G00863 Aquilegia oxysepala HOM05D000244 ORTHO05D000179 6.0e-06 55.8 108 36.1
DCAR_006361 Daucus carota HOM05D012822 ORTHO05D176214 6.0e-06 55.8 145 33.1
Eucgr.I01545 Eucalyptus grandis HOM05D000244 ORTHO05D000179 6.0e-06 55.8 123 34.1
FvH4_7g22970 Fragaria vesca HOM05D000244 ORTHO05D000179 6.0e-06 55.8 167 33.5
FAN01G1272 Fragaria x ananassa HOM05D000244 ORTHO05D000179 6.0e-06 55.8 167 33.5
FAN01G2881 Fragaria x ananassa HOM05D000244 ORTHO05D000179 6.0e-06 55.8 167 33.5
FAN03G3488 Fragaria x ananassa HOM05D000244 ORTHO05D000179 6.0e-06 55.8 167 33.5
FAN06G0304 Fragaria x ananassa HOM05D000244 ORTHO05D000179 6.0e-06 55.8 167 33.5
FAN06G2890 Fragaria x ananassa HOM05D000244 ORTHO05D000179 6.0e-06 55.8 167 33.5
HanXRQChr15g0496571 Helianthus annuus HOM05D000244 ORTHO05D000179 6.0e-06 55.8 115 34.8
Lsat_1_v5_gn_6_10180 Lactuca sativa HOM05D000244 ORTHO05D000179 6.0e-06 55.8 114 33.3
Lj4g0028178 Lotus japonicus HOM05D000244 ORTHO05D000179 6.0e-06 55.8 152 32.9
Peaxi162Scf00024g00161 Petunia axillaris HOM05D000244 ORTHO05D000179 6.0e-06 55.8 115 32.2
RcHm_v2.0_Chr1g0368171 Rosa chinensis HOM05D000244 ORTHO05D000179 6.0e-06 55.8 167 32.3
Sed0017250 Sechium edule HOM05D000244 ORTHO05D000179 6.0e-06 55.8 156 31.4
Zm00001eb387910 Zea mays HOM05D000244 ORTHO05D000179 6.0e-06 55.8 123 37.4
MSTRG.12043 Avicennia marina HOM05D000244 ORTHO05D000179 7.8e-06 55.5 110 37.3
Cpa.g.sc19.284 Carica papaya HOM05D000244 ORTHO05D000179 7.8e-06 55.5 156 33.3
CsaV3_1G043400 Cucumis sativus L. HOM05D000244 ORTHO05D000179 7.8e-06 55.5 164 33.5
Eucgr.G00086 Eucalyptus grandis HOM05D000244 ORTHO05D002559 7.8e-06 55.5 152 32.9
FAN21G1282 Fragaria x ananassa HOM05D000244 ORTHO05D000179 7.8e-06 55.5 143 35.0
Hma1.2p1_1595F.1_g292730 Hydrangea macrophylla HOM05D000244 ORTHO05D000179 7.8e-06 55.5 138 32.6
MD01G1138500 Malus domestica HOM05D000244 ORTHO05D000179 7.8e-06 55.5 138 32.6
Manes.10G027000 Manihot esculenta HOM05D000244 ORTHO05D000179 7.8e-06 55.5 151 32.5
Nn2g11217 Nelumbo nucifera HOM05D000244 ORTHO05D000179 7.8e-06 55.5 147 32.0
Oeu020241.1 Olea europaea HOM05D000244 ORTHO05D004919 7.8e-06 55.5 137 34.3
Phvul.006G013800 Phaseolus vulgaris HOM05D000244 ORTHO05D000179 7.8e-06 55.5 155 31.0
Phvul.008G192600 Phaseolus vulgaris HOM05D000244 ORTHO05D000179 7.8e-06 55.5 100 36.0
Sabra09G0053200 Salix brachista HOM05D000244 ORTHO05D000179 7.8e-06 55.5 163 30.1
Sc10g0001810 Simmondsia chinensis HOM05D000244 ORTHO05D000179 7.8e-06 55.5 138 33.3
Sopen09g032560 Solanum pennellii HOM05D000244 ORTHO05D000179 7.8e-06 55.5 118 31.4
PGSC0003DMG400017252 Solanum tuberosum HOM05D000244 ORTHO05D000179 7.8e-06 55.5 118 33.1
VMungo0647G0284 Vigna mungo HOM05D000244 ORTHO05D000179 7.8e-06 55.5 100 36.0


User provided reference genes

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