Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_019997 Daucus carota HOM05D005219 ORTHO05D006451 0.0e+00 1312.0 661 100.0
DCAR_009584 Daucus carota HOM05D005219 ORTHO05D006451 1.5e-241 839.7 708 64.7
CSS0004797 Camellia sinensis var. sinensis HOM05D005219 ORTHO05D006451 1.5e-209 733.4 709 54.3
CSS0003875 Camellia sinensis var. sinensis HOM05D005219 ORTHO05D006451 2.2e-208 729.6 709 54.2
Actinidia19951 Actinidia chinensis HOM05D005219 ORTHO05D006451 4.6e-206 721.8 714 54.1
Actinidia36586 Actinidia chinensis HOM05D005219 ORTHO05D004865 1.7e-205 719.9 715 54.4
Lj4C816G5 Lonicera japonica HOM05D005219 ORTHO05D006451 4.9e-200 701.8 707 54.0
ECA233G5772 Erigeron canadensis HOM05D005219 ORTHO05D006451 3.9e-197 692.2 667 55.2
HanXRQChr02g0043081 Helianthus annuus HOM05D005219 ORTHO05D006451 2.5e-196 689.5 673 55.0
Lsat_1_v5_gn_5_69540 Lactuca sativa HOM05D005219 ORTHO05D006451 1.1e-191 674.1 686 53.9
Cfa002238 Carpinus fangiana HOM05D005219 ORTHO05D006451 3.9e-189 665.6 714 50.7
Hund06895 Selenicereus undatus HOM05D005219 ORTHO05D006451 1.9e-188 663.3 685 52.0
GSVIVG01022419001 Vitis vinifera HOM05D005219 ORTHO05D006451 7.4e-188 661.4 708 51.1
Nitab4.5_0002704g0040 Nicotiana tabacum HOM05D005219 ORTHO05D006451 2.1e-187 659.8 719 50.2
Nn1g08341 Nelumbo nucifera HOM05D005219 ORTHO05D006451 3.1e-186 656.0 732 49.5
Rhsim10G0123800 Rhododendron simsii HOM05D005219 ORTHO05D006451 3.1e-186 656.0 675 52.4
CsaV3_2G019800 Cucumis sativus L. HOM05D005219 ORTHO05D006451 4.1e-186 655.6 709 50.2
ClCG02G000120 Citrullus lanatus HOM05D005219 ORTHO05D006451 1.5e-185 653.7 712 50.4
Nitab4.5_0000496g0030 Nicotiana tabacum HOM05D005219 ORTHO05D006451 5.9e-185 651.7 719 49.8
Cc00_g05550 Coffea canephora HOM05D005219 ORTHO05D006451 7.6e-185 651.4 721 50.8
Cpa.g.sc37.82 Carica papaya HOM05D005219 ORTHO05D006451 5.0e-184 648.7 727 48.7
Solyc05g056530.4 Solanum lycopersicum HOM05D005219 ORTHO05D006451 6.5e-184 648.3 725 49.5
PGSC0003DMG400023442 Solanum tuberosum HOM05D005219 ORTHO05D006451 1.1e-183 647.5 726 49.3
Peaxi162Scf00525g00059 Petunia axillaris HOM05D005219 ORTHO05D006451 2.5e-183 646.4 721 50.3
AUR62004810 Chenopodium quinoa HOM05D005219 ORTHO05D006451 5.5e-183 645.2 687 50.4
Oeu011013.3 Olea europaea HOM05D005219 ORTHO05D006451 5.5e-183 645.2 690 51.0
Sopen05g034930 Solanum pennellii HOM05D005219 ORTHO05D006451 7.2e-183 644.8 726 49.7
TWI75G0018 Tripterygium wilfordii HOM05D005219 ORTHO05D006451 1.6e-182 643.7 690 51.3
CiPaw.03G253500 Carya illinoinensis HOM05D005219 ORTHO05D006451 2.1e-182 643.3 729 48.8
TAR381G1173 Trochodendron aralioides HOM05D005219 ORTHO05D006451 3.5e-182 642.5 729 49.7
Thecc.01G233500 Theobroma cacao HOM05D005219 ORTHO05D006451 6.1e-182 641.7 730 48.1
Eucgr.I00008 Eucalyptus grandis HOM05D005219 ORTHO05D006451 1.0e-181 641.0 713 48.8
arahy.Tifrunner.gnm1.ann1.9Z2GEU Arachis hypogaea HOM05D005219 ORTHO05D006451 1.3e-181 640.6 712 48.9
Duzib147G1025 Durio zibethinus HOM05D005219 ORTHO05D006451 1.8e-181 640.2 719 48.8
Prupe.4G281500 Prunus persica HOM05D005219 ORTHO05D006451 1.8e-181 640.2 707 49.2
EL10Ac4g08973 Beta vulgaris HOM05D005219 ORTHO05D006451 5.1e-181 638.6 686 49.9
PGR142G2743 Punica granatum HOM05D005219 ORTHO05D006451 6.7e-181 638.3 719 49.0
CiPaw.04G179100 Carya illinoinensis HOM05D005219 ORTHO05D006451 2.5e-180 636.3 722 48.2
Oeu037875.1 Olea europaea HOM05D005219 ORTHO05D006451 3.3e-180 636.0 701 49.8
arahy.Tifrunner.gnm1.ann1.4364K7 Arachis hypogaea HOM05D005219 ORTHO05D006451 9.7e-180 634.4 711 48.5
Gohir.A05G376400 Gossypium hirsutum HOM05D005219 ORTHO05D006451 8.2e-179 631.3 712 48.2
AUR62036029 Chenopodium quinoa HOM05D005219 ORTHO05D006451 2.4e-178 629.8 726 47.4
MD15G1138200 Malus domestica HOM05D005219 ORTHO05D006451 3.1e-178 629.4 709 48.7
CAN.G1156.53 Capsicum annuum HOM05D005219 ORTHO05D006451 6.9e-178 628.2 725 48.6
Ca_17595_v3 Cicer arietinum L. HOM05D005219 ORTHO05D006451 2.0e-177 626.7 710 49.9
CANSAT54G2070 Cannabis sativa HOM05D005219 ORTHO05D006451 2.6e-177 626.3 699 50.4
Ciclev10025072m.g Citrus clementina HOM05D005219 ORTHO05D006451 2.6e-177 626.3 693 49.8
Lalb_Chr13g0296831 Lupinus albus HOM05D005219 ORTHO05D006451 2.6e-177 626.3 717 49.9
Ah.06g191770 Amaranthus hybridus HOM05D005219 ORTHO05D006451 2.2e-176 623.2 680 48.8
TPR.G12784 Trifolium pratense HOM05D005219 ORTHO05D006451 2.2e-176 623.2 698 49.3
Medtr8g095210 Medicago truncatula HOM05D005219 ORTHO05D006451 6.5e-176 621.7 699 48.9
Gorai.012G044600 Gossypium raimondii HOM05D005219 ORTHO05D006451 8.5e-176 621.3 716 47.6
Gohir.D04G039600 Gossypium hirsutum HOM05D005219 ORTHO05D006451 1.1e-175 620.9 712 47.5
QL10p038974 Quercus lobata HOM05D005219 ORTHO05D006451 1.1e-175 620.9 723 49.5
Sed0017542 Sechium edule HOM05D005219 ORTHO05D006451 1.4e-175 620.5 712 48.9
Hund22177 Selenicereus undatus HOM05D005219 ORTHO05D006451 5.5e-175 618.6 690 49.6
Lalb_Chr12g0202821 Lupinus albus HOM05D005219 ORTHO05D006451 6.7e-173 611.7 748 47.1
Potri.019G008541 Populus trichocarpa HOM05D005219 ORTHO05D006451 6.7e-173 611.7 711 48.4
RcHm_v2.0_Chr2g0123471 Rosa chinensis HOM05D005219 ORTHO05D006451 2.5e-172 609.8 702 48.7
FvH4_1g25450 Fragaria vesca HOM05D005219 ORTHO05D006451 4.3e-172 609.0 697 47.8
FAN28G0381 Fragaria x ananassa HOM05D005219 ORTHO05D006451 6.3e-171 605.1 697 47.3
Potri.004G138900 Populus trichocarpa HOM05D005219 ORTHO05D006451 6.3e-171 605.1 715 49.0
Sabra19G0006900 Salix brachista HOM05D005219 ORTHO05D006451 6.3e-171 605.1 716 47.5
Atru.chr4.1140 Acer truncatum HOM05D005219 ORTHO05D006451 8.2e-171 604.7 697 48.2
FAN19G1780 Fragaria x ananassa HOM05D005219 ORTHO05D006451 1.1e-170 604.4 691 48.0
Lj4g0026114 Lotus japonicus HOM05D005219 ORTHO05D006451 1.1e-170 604.4 701 47.4
SGA_v2.0_scaffold54G19585 Striga asiatica HOM05D005219 ORTHO05D006451 1.1e-170 604.4 698 47.3
FAN23G1877 Fragaria x ananassa HOM05D005219 ORTHO05D006451 1.8e-170 603.6 697 47.6
Glyma.08G004700 Glycine max HOM05D005219 ORTHO05D006451 5.3e-170 602.1 706 46.9
FAN26G1898 Fragaria x ananassa HOM05D005219 ORTHO05D006451 7.7e-169 598.2 694 47.3
CDE06G1179 Ceratophyllum demersum HOM05D005219 ORTHO05D006451 2.2e-168 596.7 694 47.8
Glyma.05G197300 Glycine max HOM05D005219 ORTHO05D006451 1.9e-167 593.6 704 47.3
Aqoxy6G00109 Aquilegia oxysepala HOM05D005219 ORTHO05D006451 2.5e-167 593.2 678 47.1
VMungo1309G1202 Vigna mungo HOM05D005219 ORTHO05D006451 5.5e-167 592.0 713 46.0
MSTRG.23501 Avicennia marina HOM05D005219 ORTHO05D006451 2.1e-166 590.1 673 48.6
Phvul.002G277800 Phaseolus vulgaris HOM05D005219 ORTHO05D006451 2.7e-166 589.7 716 45.8
Migut.H00795 Erythranthe guttata HOM05D005219 ORTHO05D006451 3.6e-166 589.3 698 47.0
THA.LOC104818408 Tarenaya hassleriana HOM05D005219 ORTHO05D006451 5.7e-164 582.0 721 45.2
PSO170G0098 Papaver somniferum HOM05D005219 ORTHO05D006451 3.7e-163 579.3 708 46.6
PSO782G1219 Papaver somniferum HOM05D005219 ORTHO05D006451 6.3e-163 578.6 727 45.3
SGA_v2.0_scaffold211G42145 Striga asiatica HOM05D005219 ORTHO05D006451 1.6e-161 573.9 668 46.7
Glyma.06G159700 Glycine max HOM05D005219 ORTHO05D006451 2.0e-161 573.5 729 44.3
Phvul.009G157400 Phaseolus vulgaris HOM05D005219 ORTHO05D006451 2.6e-161 573.2 698 45.8
Sc09g0004330 Simmondsia chinensis HOM05D005219 ORTHO05D006451 2.9e-160 569.7 601 52.1
Dinv16800 Davidia involucrata HOM05D005219 ORTHO05D006451 8.5e-160 568.2 599 51.1
Carub.0006s0762 Capsella rubella HOM05D005219 ORTHO05D006451 1.9e-159 567.0 730 44.7
AT5G08630 Arabidopsis thaliana HOM05D005219 ORTHO05D006451 2.7e-158 563.1 724 44.8
Os02g0556900 Oryza sativa ssp. japonica HOM05D005219 ORTHO05D006451 2.7e-158 563.1 663 45.4
HPP92_011421 Vanilla planifolia HOM05D005219 ORTHO05D006451 8.0e-158 561.6 694 46.0
AL6G19360 Arabidopsis lyrata HOM05D005219 ORTHO05D006451 1.5e-156 557.4 730 44.2
vmacro12733 Vaccinium macrocarpon HOM05D005219 ORTHO05D006451 1.7e-155 553.9 794 42.6
Thhalv10012814m.g Eutrema salsugineum HOM05D005219 ORTHO05D006451 8.2e-155 551.6 710 44.8
unitig_899.g14489 Utricularia gibba HOM05D005219 ORTHO05D006451 1.1e-154 551.2 677 46.1
BcaB08g37236 Brassica carinata HOM05D005219 ORTHO05D006451 4.5e-153 545.8 698 44.6
CARHR204350 Cardamine hirsuta HOM05D005219 ORTHO05D006451 4.5e-153 545.8 724 43.4
A03p04030 Brassica napus HOM05D005219 ORTHO05D006451 6.5e-152 542.0 722 43.8
C09p68310 Brassica napus HOM05D005219 ORTHO05D006451 8.5e-152 541.6 716 43.0
BolC9t59579H Brassica oleracea HOM05D005219 ORTHO05D006451 2.5e-151 540.0 727 42.9
A10p28110 Brassica napus HOM05D005219 ORTHO05D006451 3.2e-151 539.7 712 42.7
BcaB01g05651 Brassica carinata HOM05D005219 ORTHO05D006451 4.2e-151 539.3 713 43.5
C03p04490 Brassica napus HOM05D005219 ORTHO05D006451 2.7e-150 536.6 713 43.2
BraA03t09746Z Brassica rapa HOM05D005219 ORTHO05D006451 1.0e-149 534.6 723 43.4
Hma1.2p1_0057F.1_g032080 Hydrangea macrophylla HOM05D005219 ORTHO05D006451 1.0e-149 534.6 614 50.3
BraA10t44860Z Brassica rapa HOM05D005219 ORTHO05D006451 6.8e-149 531.9 716 42.3
MELO3C023202.2 Cucumis melo HOM05D005219 ORTHO05D006451 7.0e-146 521.9 616 47.6
Aa31LG3G17910 Aethionema arabicum HOM05D005219 ORTHO05D006451 5.9e-145 518.8 764 41.6
Haze_25419 Corylus avellana HOM05D005219 ORTHO05D006451 1.0e-144 518.1 636 46.2
Zm00001eb182070 Zea mays HOM05D005219 ORTHO05D006451 2.3e-141 506.9 614 45.3
Manes.13G076600 Manihot esculenta HOM05D005219 ORTHO05D006451 7.5e-140 501.9 615 47.5
Psat7g041880 Pisum sativum HOM05D005219 ORTHO05D006451 1.4e-133 481.1 632 44.5
SEGI_19215 Sequoiadendron giganteum HOM05D005219 ORTHO05D006451 1.2e-132 478.0 773 38.6
ATR0737G007 Amborella trichopoda HOM05D005219 ORTHO05D006451 1.5e-132 477.6 661 43.4
SHI11418 Sapria himalayana HOM05D005219 ORTHO05D006451 1.3e-131 474.6 623 43.0
Sp6g34240 Schrenkiella parvula HOM05D005219 ORTHO05D006451 3.2e-122 443.4 465 48.8
Pp3c1_29080 Physcomitrium patens HOM05D005219 ORTHO05D006451 6.8e-117 425.6 751 37.4
MBI07_g10939_MAGBIO Magnolia biondii HOM05D005219 ORTHO05D006451 4.9e-115 419.5 731 37.6
Pp3c2_17910 Physcomitrium patens HOM05D005219 ORTHO05D006451 3.0e-112 410.2 759 37.9
CDE08G1591 Ceratophyllum demersum HOM05D005219 ORTHO05D006451 3.9e-112 409.8 682 38.3
Mapoly0096s0060 Marchantia polymorpha HOM05D005219 ORTHO05D006451 7.3e-111 405.6 816 34.7
Atru.chr4.1215 Acer truncatum HOM05D005219 ORTHO05D006451 9.2e-106 388.7 516 45.0
Pp3c1_29082 Physcomitrium patens HOM05D005219 ORTHO05D006451 3.0e-88 330.5 504 39.7
AagrBONN_evm.TU.Sc2ySwM_344.1599 Anthoceros agrestis HOM05D005219 ORTHO05D006451 1.5e-87 328.2 536 37.3
ATR1136G012 Amborella trichopoda HOM05D005219 ORTHO05D006451 4.8e-78 296.6 840 29.2
SMO144G0202 Selaginella moellendorffii HOM05D005219 ORTHO05D006451 7.1e-74 282.7 496 35.1
CBR_g15970 Chara braunii HOM05D005219 ORTHO05D006451 2.9e-59 234.2 650 28.3
SMO169G0116 Selaginella moellendorffii HOM05D005219 ORTHO05D006451 7.4e-55 219.5 423 35.0
SMO169G0082 Selaginella moellendorffii HOM05D005219 ORTHO05D006451 2.0e-44 184.9 222 41.9
Psat7g208160 Pisum sativum HOM05D005219 ORTHO05D006451 1.8e-40 171.8 208 44.2
Zm00001eb243850 Zea mays HOM05D000001 ORTHO05D000003 2.4e-37 161.4 287 36.2
ATR0721G071 Amborella trichopoda HOM05D005219 ORTHO05D006451 3.2e-34 151.0 198 44.9
Os04g0439300 Oryza sativa ssp. japonica HOM05D005219 ORTHO05D006451 5.2e-32 143.7 150 47.3
Haze_25418 Corylus avellana HOM05D005219 ORTHO05D006451 1.3e-30 139.0 98 67.3
Sp6g34250 Schrenkiella parvula HOM05D005219 ORTHO05D006451 2.8e-30 137.9 124 55.6
Os04g0439400 Oryza sativa ssp. japonica HOM05D005219 ORTHO05D006451 3.1e-29 134.4 99 64.6
Cpa.g.c42282 Carica papaya HOM05D005219 ORTHO05D006451 7.7e-28 129.8 96 62.5
Sabra01G0147700 Salix brachista HOM05D005219 ORTHO05D006451 5.7e-23 113.6 165 40.6
Sabra04G0089200 Salix brachista HOM05D005219 ORTHO05D006451 7.5e-23 113.2 115 47.8
HPP92_027054 Vanilla planifolia HOM05D005219 ORTHO05D006451 7.0e-21 106.7 147 42.9
Glyma.07G026800 Glycine max HOM05D005219 ORTHO05D021551 3.4e-15 87.8 101 46.5
CBR_g38007 Chara braunii HOM05D001908 ORTHO05D001892 1.7e-11 75.5 111 41.4
CBR_g31875 Chara braunii HOM05D028850 ORTHO05D006451 3.9e-11 74.3 107 41.1
VMungo1383G0740 Vigna mungo HOM05D005219 ORTHO05D011240 3.3e-10 71.2 99 44.4
PGR119G0862 Punica granatum HOM05D005219 ORTHO05D006451 5.6e-10 70.5 238 27.7
Sopen11g026500 Solanum pennellii HOM05D001312 ORTHO05D001832 5.6e-10 70.5 302 26.5
Dinv12534 Davidia involucrata HOM05D001312 ORTHO05D001832 6.2e-09 67.0 161 31.7
Peaxi162Scf00157g00417 Petunia axillaris HOM05D001312 ORTHO05D001832 8.0e-09 66.6 205 31.7
Solyc11g066780.3 Solanum lycopersicum HOM05D001312 ORTHO05D001832 8.0e-09 66.6 310 25.5
Aqoxy1G00966 Aquilegia oxysepala HOM05D001312 ORTHO05D001832 1.4e-08 65.9 279 24.0
MSTRG.17625 Avicennia marina HOM05D001312 ORTHO05D001832 2.0e-07 62.0 192 28.6
Nitab4.5_0002571g0030 Nicotiana tabacum HOM05D001312 ORTHO05D001832 2.6e-07 61.6 171 30.4
Nitab4.5_0004926g0010 Nicotiana tabacum HOM05D001312 ORTHO05D001832 3.4e-07 61.2 210 29.0
DCAR_006144 Daucus carota HOM05D001312 ORTHO05D001832 5.8e-07 60.5 181 26.5
QL01p014004 Quercus lobata HOM05D001312 ORTHO05D001832 7.5e-07 60.1 165 30.9
SEGI_36901 Sequoiadendron giganteum HOM05D001312 ORTHO05D001832 7.5e-07 60.1 228 27.6
CDE06G0794 Ceratophyllum demersum HOM05D001312 ORTHO05D001832 9.8e-07 59.7 244 29.1
Cc01_g09930 Coffea canephora HOM05D001312 ORTHO05D001832 9.8e-07 59.7 188 29.3
Nn2g13967 Nelumbo nucifera HOM05D001312 ORTHO05D001832 1.3e-06 59.3 176 26.7
Nitab4.5_0000442g0240 Nicotiana tabacum HOM05D001312 ORTHO05D001832 1.7e-06 58.9 178 29.2
SEGI_08770 Sequoiadendron giganteum HOM05D001312 ORTHO05D001832 1.7e-06 58.9 181 32.0
Pp3c7_5480 Physcomitrium patens HOM05D001312 ORTHO05D001832 2.2e-06 58.5 154 29.2
Potri.004G189600 Populus trichocarpa HOM05D001312 ORTHO05D001832 2.2e-06 58.5 180 31.1
CAN.G644.40 Capsicum annuum HOM05D001312 ORTHO05D001832 2.9e-06 58.2 189 28.6
Actinidia07206 Actinidia chinensis HOM05D001312 ORTHO05D001832 3.7e-06 57.8 161 30.4
Peaxi162Scf00789g00216 Petunia axillaris HOM05D001312 ORTHO05D001832 4.9e-06 57.4 287 23.7
Psat5g255240 Pisum sativum HOM05D001312 ORTHO05D001832 4.9e-06 57.4 213 26.8
SGA_v2.0_scaffold29G12279 Striga asiatica HOM05D001312 ORTHO05D001832 4.9e-06 57.4 222 26.1
Ca_01686_v3 Cicer arietinum L. HOM05D001312 ORTHO05D001832 6.4e-06 57.0 232 27.6


User provided reference genes

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