Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_019968 Daucus carota HOM05D005543 ORTHO05D006584 1.1e-110 403.3 200 100.0
DCAR_009611 Daucus carota HOM05D005543 ORTHO05D006584 2.4e-65 252.7 196 62.2
Actinidia17758 Actinidia chinensis HOM05D005543 ORTHO05D006584 2.9e-63 245.7 194 63.4
Hma1.2p1_0276F.1_g110980 Hydrangea macrophylla HOM05D005543 ORTHO05D006584 6.5e-63 244.6 199 58.8
Dinv41020 Davidia involucrata HOM05D005543 ORTHO05D006584 8.5e-63 244.2 193 60.1
THA.LOC104800097 Tarenaya hassleriana HOM05D005543 ORTHO05D006584 3.2e-62 242.3 187 62.6
Duzib116G0276 Durio zibethinus HOM05D005543 ORTHO05D006584 3.6e-61 238.8 162 65.4
MD05G1036200 Malus domestica HOM05D005543 ORTHO05D006584 1.8e-60 236.5 191 56.0
Thecc.08G164300 Theobroma cacao HOM05D005543 ORTHO05D006584 1.8e-60 236.5 190 59.5
COL.COLO4_13722 Corchorus olitorius HOM05D005543 ORTHO05D006584 5.2e-60 235.0 192 59.4
CANSAT25G2335 Cannabis sativa HOM05D005543 ORTHO05D006584 8.8e-60 234.2 197 56.9
TAR625G0687 Trochodendron aralioides HOM05D005543 ORTHO05D006584 8.8e-60 234.2 200 57.0
CSS0010673 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 1.5e-59 233.4 163 63.2
Nn5g28876 Nelumbo nucifera HOM05D005543 ORTHO05D006584 5.7e-59 231.5 197 56.3
Peaxi162Scf00226g00217 Petunia axillaris HOM05D005543 ORTHO05D006584 5.7e-59 231.5 177 61.0
Haze_17839 Corylus avellana HOM05D005543 ORTHO05D006584 7.5e-59 231.1 193 57.5
Solyc04g072120.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 9.7e-59 230.7 192 58.3
Sopen04g028290 Solanum pennellii HOM05D005543 ORTHO05D006584 1.7e-58 229.9 192 57.8
MSTRG.22116 Avicennia marina HOM05D005543 ORTHO05D006584 3.7e-58 228.8 181 56.4
FAN15G0123 Fragaria x ananassa HOM05D005543 ORTHO05D006584 3.7e-58 228.8 170 61.8
HanXRQChr11g0320551 Helianthus annuus HOM05D005543 ORTHO05D006584 3.7e-58 228.8 192 58.3
FvH4_2g12791 Fragaria vesca HOM05D005543 ORTHO05D006584 4.8e-58 228.4 170 61.2
Cc10_g06390 Coffea canephora HOM05D005543 ORTHO05D006584 6.3e-58 228.0 192 57.3
RcHm_v2.0_Chr6g0273681 Rosa chinensis HOM05D005543 ORTHO05D006584 6.3e-58 228.0 181 57.5
PGSC0003DMG400031139 Solanum tuberosum HOM05D005543 ORTHO05D006584 6.3e-58 228.0 193 57.0
Nitab4.5_0001000g0150 Nicotiana tabacum HOM05D005543 ORTHO05D006584 1.1e-57 227.3 192 56.8
FAN24G1753 Fragaria x ananassa HOM05D005543 ORTHO05D006584 1.4e-57 226.9 170 61.2
Prupe.8G044500 Prunus persica HOM05D005543 ORTHO05D006584 1.4e-57 226.9 189 56.1
Eucgr.F04165 Eucalyptus grandis HOM05D005543 ORTHO05D006584 1.8e-57 226.5 197 56.9
TWI53G2072 Tripterygium wilfordii HOM05D005543 ORTHO05D006584 1.8e-57 226.5 200 55.0
TAR381G0628 Trochodendron aralioides HOM05D005543 ORTHO05D006584 1.8e-57 226.5 154 68.2
Aa31LG4G8860 Aethionema arabicum HOM05D005543 ORTHO05D006584 3.1e-57 225.7 181 56.4
Haze_17833 Corylus avellana HOM05D005543 ORTHO05D006584 3.1e-57 225.7 193 56.0
MD10G1038300 Malus domestica HOM05D005543 ORTHO05D006584 3.1e-57 225.7 193 53.9
Thhalv10019179m.g Eutrema salsugineum HOM05D005543 ORTHO05D006584 4.1e-57 225.3 181 60.2
Nitab4.5_0000433g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 5.3e-57 224.9 192 56.8
vmacro21199 Vaccinium macrocarpon HOM05D005543 ORTHO05D006584 5.3e-57 224.9 216 53.2
Gorai.009G259700 Gossypium raimondii HOM05D005543 ORTHO05D006584 7.0e-57 224.6 185 55.7
Carub.0002s1854 Capsella rubella HOM05D005543 ORTHO05D006584 9.1e-57 224.2 181 59.1
Sp5g26800 Schrenkiella parvula HOM05D005543 ORTHO05D006584 1.2e-56 223.8 181 59.7
SpUn0095_0030 Schrenkiella parvula HOM05D005543 ORTHO05D006584 1.2e-56 223.8 181 59.7
Gohir.D05G248600 Gossypium hirsutum HOM05D005543 ORTHO05D006584 1.6e-56 223.4 185 55.1
Lsat_1_v5_gn_9_42581 Lactuca sativa HOM05D005543 ORTHO05D006584 2.0e-56 223.0 192 54.7
Manes.02G185600 Manihot esculenta HOM05D005543 ORTHO05D006584 2.7e-56 222.6 158 63.3
PSO541G4578 Papaver somniferum HOM05D005543 ORTHO05D006584 2.7e-56 222.6 181 56.9
AT1G71780 Arabidopsis thaliana HOM05D005543 ORTHO05D006584 5.9e-56 221.5 198 55.1
SGA_v2.0_scaffold166G38393 Striga asiatica HOM05D005543 ORTHO05D006584 5.9e-56 221.5 197 53.3
PGR102G0915 Punica granatum HOM05D005543 ORTHO05D006584 1.0e-55 220.7 197 56.3
MELO3C019959.2 Cucumis melo HOM05D005543 ORTHO05D006584 1.3e-55 220.3 192 54.2
Gohir.A05G247100 Gossypium hirsutum HOM05D005543 ORTHO05D006584 1.7e-55 219.9 158 59.5
Potri.002G062300 Populus trichocarpa HOM05D005543 ORTHO05D006584 1.7e-55 219.9 177 59.9
CiPaw.16G007100 Carya illinoinensis HOM05D005543 ORTHO05D006584 2.9e-55 219.2 182 58.2
Psat0s2687g0120 Pisum sativum HOM05D005543 ORTHO05D006584 3.8e-55 218.8 162 62.3
AL2G31350 Arabidopsis lyrata HOM05D005543 ORTHO05D006584 8.5e-55 217.6 192 56.8
ClCG08G007180 Citrullus lanatus HOM05D005543 ORTHO05D006584 8.5e-55 217.6 198 52.0
Migut.N02941 Erythranthe guttata HOM05D005543 ORTHO05D006584 1.1e-54 217.2 182 55.5
PSO675G1818 Papaver somniferum HOM05D005543 ORTHO05D006584 1.1e-54 217.2 181 55.8
Sc20g0003140 Simmondsia chinensis HOM05D005543 ORTHO05D006584 1.1e-54 217.2 186 55.4
ECA232G2646 Erigeron canadensis HOM05D005543 ORTHO05D006584 1.5e-54 216.9 157 65.0
Lj7A386T90 Lonicera japonica HOM05D005543 ORTHO05D006584 1.5e-54 216.9 200 54.0
Ca_04656_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 1.9e-54 216.5 159 61.0
Glyma.16G160100 Glycine max HOM05D005543 ORTHO05D006584 1.9e-54 216.5 192 54.7
Sabra02G0050300 Salix brachista HOM05D005543 ORTHO05D006584 1.9e-54 216.5 156 64.7
arahy.Tifrunner.gnm1.ann1.FFL75L Arachis hypogaea HOM05D005543 ORTHO05D006584 2.5e-54 216.1 202 51.5
CARHR291000 Cardamine hirsuta HOM05D005543 ORTHO05D006584 2.5e-54 216.1 181 58.0
VMungo0464G0571 Vigna mungo HOM05D005543 ORTHO05D006584 4.2e-54 215.3 191 55.0
Atru.chr13.1972 Acer truncatum HOM05D005543 ORTHO05D006584 5.5e-54 214.9 173 56.1
Peaxi162Scf00160g01739 Petunia axillaris HOM05D005543 ORTHO05D006584 5.5e-54 214.9 152 63.8
Ah.05g168360 Amaranthus hybridus HOM05D005543 ORTHO05D006584 7.2e-54 214.5 196 52.0
SalBow6G1236 Salvia bowleyana HOM05D005543 ORTHO05D006584 7.2e-54 214.5 197 53.3
Nitab4.5_0002585g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 9.4e-54 214.2 175 56.6
BcaB03g15617 Brassica carinata HOM05D005543 ORTHO05D006584 1.2e-53 213.8 180 57.8
arahy.Tifrunner.gnm1.ann1.XA0Q13 Arachis hypogaea HOM05D005543 ORTHO05D006584 1.6e-53 213.4 202 50.5
A07p30600 Brassica napus HOM05D005543 ORTHO05D006584 1.6e-53 213.4 182 56.6
Medtr6g034680 Medicago truncatula HOM05D005543 ORTHO05D006584 1.6e-53 213.4 159 61.0
BraA07t30695Z Brassica rapa HOM05D005543 ORTHO05D006584 3.6e-53 212.2 182 56.6
Lalb_Chr06g0161821 Lupinus albus HOM05D005543 ORTHO05D006584 6.1e-53 211.5 166 57.2
BcaC08g46604 Brassica carinata HOM05D005543 ORTHO05D006584 1.8e-52 209.9 183 56.3
Lj2g0006240 Lotus japonicus HOM05D005543 ORTHO05D006584 1.8e-52 209.9 193 51.8
Phvul.004G088200 Phaseolus vulgaris HOM05D005543 ORTHO05D006584 1.8e-52 209.9 202 52.0
BolC6t38643H Brassica oleracea HOM05D005543 ORTHO05D006584 3.0e-52 209.1 182 56.0
unitig_578.g16221 Utricularia gibba HOM05D005543 ORTHO05D006584 3.0e-52 209.1 156 61.5
GSVIVG01013678001 Vitis vinifera HOM05D005543 ORTHO05D006584 3.0e-52 209.1 181 53.6
BolC6t39636H Brassica oleracea HOM05D005543 ORTHO05D006584 4.0e-52 208.8 183 56.3
C06p45840 Brassica napus HOM05D005543 ORTHO05D006584 5.2e-52 208.4 183 56.3
BcaC08g45757 Brassica carinata HOM05D005543 ORTHO05D006584 6.8e-52 208.0 182 55.5
C06p35380 Brassica napus HOM05D005543 ORTHO05D006584 6.8e-52 208.0 182 55.5
AUR62034923 Chenopodium quinoa HOM05D005543 ORTHO05D006584 6.8e-52 208.0 189 51.9
Nitab4.5_0004541g0020 Nicotiana tabacum HOM05D005543 ORTHO05D006584 1.2e-51 207.2 175 56.6
EL10Ac1g01633 Beta vulgaris HOM05D005543 ORTHO05D006584 2.0e-51 206.5 200 50.5
BraA07t31358Z Brassica rapa HOM05D005543 ORTHO05D006584 2.0e-51 206.5 183 55.7
Sed0022332 Sechium edule HOM05D005543 ORTHO05D006584 2.6e-51 206.1 200 52.0
Hund17502 Selenicereus undatus HOM05D005543 ORTHO05D006584 2.6e-51 206.1 172 57.0
AUR62026611 Chenopodium quinoa HOM05D005543 ORTHO05D006584 7.5e-51 204.5 188 51.6
Ciclev10002600m.g Citrus clementina HOM05D005543 ORTHO05D006584 6.3e-50 201.4 173 52.0
Solyc12g056760.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 1.8e-49 199.9 149 59.1
Sopen12g029440 Solanum pennellii HOM05D005543 ORTHO05D006584 2.4e-49 199.5 149 59.7
A07p37930 Brassica napus HOM05D005543 ORTHO05D006584 4.1e-49 198.7 183 54.6
PGSC0003DMG400016956 Solanum tuberosum HOM05D005543 ORTHO05D006584 5.4e-49 198.4 190 52.6
Sabra05G0151400 Salix brachista HOM05D005543 ORTHO05D006584 9.1e-49 197.6 156 57.7
HPP92_007671 Vanilla planifolia HOM05D005543 ORTHO05D006584 1.6e-48 196.8 180 50.6
CDE05G2658 Ceratophyllum demersum HOM05D005543 ORTHO05D006584 7.7e-48 194.5 155 54.2
Aqoxy6G00453 Aquilegia oxysepala HOM05D005543 ORTHO05D006584 8.6e-47 191.0 149 55.7
Nn1g05159 Nelumbo nucifera HOM05D005543 ORTHO05D006584 1.9e-46 189.9 150 55.3
Lj5g0027482 Lotus japonicus HOM05D005543 ORTHO05D006584 8.9e-44 181.0 151 53.6
Psat6g189440 Pisum sativum HOM05D005543 ORTHO05D006584 1.3e-42 177.2 159 51.6
Lj4A705G47 Lonicera japonica HOM05D005543 ORTHO05D006584 8.3e-42 174.5 167 53.9
Os01g0715800 Oryza sativa ssp. japonica HOM05D005543 ORTHO05D006584 1.3e-39 167.2 156 46.2
Ca_10645_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 8.6e-39 164.5 159 48.4
TPR.G17022 Trifolium pratense HOM05D005543 ORTHO05D006584 1.1e-38 164.1 155 48.4
BcaC08g46607 Brassica carinata HOM05D005543 ORTHO05D006584 5.6e-38 161.8 193 47.7
Medtr1g097400 Medicago truncatula HOM05D005543 ORTHO05D006584 5.6e-38 161.8 155 48.4
SEGI_03773 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 3.6e-37 159.1 158 44.3
SEGI_04047 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 3.6e-37 159.1 158 44.3
SEGI_37275 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 1.5e-35 153.7 150 44.7
CSS0045165 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 6.4e-34 148.3 132 56.8
Rhsim06G0093300 Rhododendron simsii HOM05D005543 ORTHO05D006584 2.4e-33 146.4 126 57.1
FAN27G1145 Fragaria x ananassa HOM05D005543 ORTHO05D006584 6.6e-31 138.3 99 62.6
Oeu022062.1 Olea europaea HOM05D005543 ORTHO05D006584 1.1e-30 137.5 122 54.1
CsaV3_6G004850 Cucumis sativus L. HOM05D005543 ORTHO05D006584 3.3e-30 136.0 127 53.5
Cpa.g.sc26.124 Carica papaya HOM05D005543 ORTHO05D006584 7.3e-30 134.8 118 56.8
Zm00001eb121890 Zea mays HOM05D005543 ORTHO05D006584 2.0e-24 116.7 170 36.5
QL02p036789 Quercus lobata HOM05D005543 ORTHO05D006584 2.7e-24 116.3 92 59.8
Oeu022061.1 Olea europaea HOM05D005543 ORTHO05D006584 5.2e-20 102.1 74 60.8
Mapoly0005s0207 Marchantia polymorpha HOM05D005543 ORTHO05D006584 1.2e-19 100.9 144 34.7
QL02p036792 Quercus lobata HOM05D005543 ORTHO05D006584 1.5e-19 100.5 70 61.4
TPR.G22092 Trifolium pratense HOM05D005543 ORTHO05D006584 4.4e-19 99.0 71 64.8
Sopen04g028180 Solanum pennellii HOM05D000002 ORTHO05D000047 7.5e-19 98.2 67 64.2
CSS0016395 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 1.1e-17 94.4 67 64.2
Pp3c1_40160 Physcomitrium patens HOM05D005543 ORTHO05D006584 3.2e-17 92.8 153 29.4
Pp3c17_20130 Physcomitrium patens HOM05D005543 ORTHO05D006584 1.0e-15 87.8 143 28.7
SGA_v2.0_scaffold43G16323 Striga asiatica HOM05D005543 ORTHO05D006584 8.6e-15 84.7 94 39.4
SEGI_08036 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 4.3e-14 82.4 88 42.0
VMungo1127G1001 Vigna mungo HOM05D005543 ORTHO05D006584 3.8e-10 69.3 73 50.7
SGA_v2.0_scaffold130G34341 Striga asiatica HOM05D005543 ORTHO05D006584 2.7e-08 63.2 63 47.6
Cfa018258 Carpinus fangiana HOM05D005543 ORTHO05D006584 6.0e-08 62.0 70 50.0


User provided reference genes

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