Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_019912 Daucus carota HOM05D009025 ORTHO05D011227 9.9e-178 626.7 324 100.0
TAR626G0549 Trochodendron aralioides HOM05D009025 ORTHO05D011227 2.3e-41 173.7 367 37.3
CSS0008017 Camellia sinensis var. sinensis HOM05D009025 ORTHO05D011227 5.8e-37 159.1 375 36.5
Potri.016G000700 Populus trichocarpa HOM05D009025 ORTHO05D011227 1.0e-33 148.3 390 32.6
QL05p066158 Quercus lobata HOM05D009025 ORTHO05D011227 3.0e-33 146.7 384 34.1
Phvul.006G134300 Phaseolus vulgaris HOM05D009025 ORTHO05D011227 9.6e-32 141.7 371 32.6
Nn1g07628 Nelumbo nucifera HOM05D009025 ORTHO05D011227 1.3e-31 141.4 396 33.1
Glyma.15G123700 Glycine max HOM05D009025 ORTHO05D011227 2.1e-31 140.6 364 33.8
CiPaw.10G085100 Carya illinoinensis HOM05D009025 ORTHO05D011227 3.7e-31 139.8 412 31.3
VMungo0540G2122 Vigna mungo HOM05D009025 ORTHO05D011227 3.7e-31 139.8 362 33.7
Lj6g0011463 Lotus japonicus HOM05D009025 ORTHO05D011227 4.8e-31 139.4 359 33.7
Oeu016927.1 Olea europaea HOM05D009025 ORTHO05D011227 9.0e-30 135.2 354 31.1
Medtr2g028180 Medicago truncatula HOM05D009025 ORTHO05D011227 2.6e-29 133.7 340 34.7
Rhsim13G0137900 Rhododendron simsii HOM05D009025 ORTHO05D011227 2.9e-28 130.2 313 35.8
Lalb_Chr20g0119741 Lupinus albus HOM05D009025 ORTHO05D011227 1.1e-27 128.3 388 33.0
Ciclev10015726m.g Citrus clementina HOM05D009025 ORTHO05D011227 2.1e-26 124.0 364 31.3
CiPaw.09G113300 Carya illinoinensis HOM05D009025 ORTHO05D011227 2.7e-26 123.6 396 33.1
Oeu017916.1 Olea europaea HOM05D009025 ORTHO05D011227 1.0e-25 121.7 352 31.8
Migut.M01483 Erythranthe guttata HOM05D009025 ORTHO05D011227 2.3e-25 120.6 322 31.7
Lj2C12T17 Lonicera japonica HOM05D009025 ORTHO05D011227 1.3e-23 114.8 424 29.2
Psat1g171120 Pisum sativum HOM05D009025 ORTHO05D011227 1.6e-23 114.4 326 32.8
TPR.G10502 Trifolium pratense HOM05D009025 ORTHO05D011227 2.8e-23 113.6 347 31.7
Ca_00784_v3 Cicer arietinum L. HOM05D009025 ORTHO05D011227 1.1e-22 111.7 329 33.1
Ca_11375_v3 Cicer arietinum L. HOM05D009025 ORTHO05D011227 1.1e-22 111.7 329 33.1
arahy.Tifrunner.gnm1.ann1.W10PR0 Arachis hypogaea HOM05D009025 ORTHO05D011227 3.4e-21 106.7 394 29.7
arahy.Tifrunner.gnm1.ann1.FQL4BN Arachis hypogaea HOM05D009025 ORTHO05D011227 2.2e-20 104.0 393 29.5
ATR0751G165 Amborella trichopoda HOM05D009025 ORTHO05D011227 9.4e-19 98.6 356 28.4
Os08g0499000 Oryza sativa ssp. japonica HOM05D009025 ORTHO05D011227 1.2e-18 98.2 346 30.1
Glyma.09G017800 Glycine max HOM05D009025 ORTHO05D011227 1.4e-17 94.7 380 27.6
Zm00001eb199500 Zea mays HOM05D009025 ORTHO05D011227 3.9e-17 93.2 332 29.2
Aqoxy2G01997 Aquilegia oxysepala HOM05D009025 ORTHO05D011227 3.3e-16 90.1 416 27.6
SalBow8G5084 Salvia bowleyana HOM05D009025 ORTHO05D011227 2.8e-07 60.5 170 31.2
HPP92_022808 Vanilla planifolia HOM05D009025 ORTHO05D011227 7.0e-06 55.8 213 27.7


User provided reference genes

Program Settings