Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_019882 Daucus carota HOM05D006942 ORTHO05D008737 1.4e-153 546.2 276 100.0
DCAR_009675 Daucus carota HOM05D006942 ORTHO05D008737 2.8e-112 409.1 277 73.3
ClCG10G013230 Citrullus lanatus HOM05D006942 ORTHO05D008737 1.5e-97 360.1 278 64.7
MELO3C026901.2 Cucumis melo HOM05D006942 ORTHO05D008737 7.3e-97 357.8 279 64.9
Rhsim04G0087000 Rhododendron simsii HOM05D006942 ORTHO05D008737 9.5e-97 357.5 277 65.0
vmacro09146 Vaccinium macrocarpon HOM05D006942 ORTHO05D008737 1.2e-96 357.1 276 65.6
CsaV3_3G043400 Cucumis sativus L. HOM05D006942 ORTHO05D008737 2.1e-96 356.3 278 65.5
PSO339G1210 Papaver somniferum HOM05D006942 ORTHO05D008737 2.8e-96 355.9 291 62.9
FvH4_3g25250 Fragaria vesca HOM05D006942 ORTHO05D008737 3.6e-96 355.5 283 64.7
Sed0013150 Sechium edule HOM05D006942 ORTHO05D008737 6.2e-96 354.8 281 64.1
Potri.013G059500 Populus trichocarpa HOM05D006942 ORTHO05D008737 2.3e-95 352.8 277 64.6
FAN21G2944 Fragaria x ananassa HOM05D006942 ORTHO05D008737 4.0e-95 352.1 286 64.0
COL.COLO4_13617 Corchorus olitorius HOM05D006942 ORTHO05D008737 6.8e-95 351.3 280 63.2
ECA233G4155 Erigeron canadensis HOM05D006942 ORTHO05D008737 8.9e-95 350.9 267 65.9
Sed0025081 Sechium edule HOM05D006942 ORTHO05D008737 1.5e-94 350.1 279 63.8
FAN16G3006 Fragaria x ananassa HOM05D006942 ORTHO05D008737 3.4e-94 349.0 283 63.3
Cpa.g.sc51.94 Carica papaya HOM05D006942 ORTHO05D008737 1.3e-93 347.1 300 59.3
QL07p020181 Quercus lobata HOM05D006942 ORTHO05D008737 1.7e-93 346.7 283 64.0
CANSAT78G1082 Cannabis sativa HOM05D006942 ORTHO05D008737 2.9e-93 345.9 284 63.7
Lsat_1_v5_gn_6_36781 Lactuca sativa HOM05D006942 ORTHO05D008737 4.9e-93 345.1 278 64.7
Manes.08G149200 Manihot esculenta HOM05D006942 ORTHO05D008737 1.4e-92 343.6 284 63.7
Nn7g35832 Nelumbo nucifera HOM05D006942 ORTHO05D008737 7.1e-92 341.3 281 61.2
HanXRQChr13g0398101 Helianthus annuus HOM05D006942 ORTHO05D008737 9.2e-92 340.9 285 61.4
RcHm_v2.0_Chr5g0046891 Rosa chinensis HOM05D006942 ORTHO05D008737 1.2e-91 340.5 285 62.1
Thecc.05G293100 Theobroma cacao HOM05D006942 ORTHO05D008737 1.2e-91 340.5 283 61.8
TAR633G0669 Trochodendron aralioides HOM05D006942 ORTHO05D008737 1.6e-91 340.1 287 61.3
Nn2g15884 Nelumbo nucifera HOM05D002140 ORTHO05D008737 2.1e-91 339.7 278 60.8
Atru.chr2.1323 Acer truncatum HOM05D006942 ORTHO05D008737 4.6e-91 338.6 296 61.5
TWI34G0045 Tripterygium wilfordii HOM05D006942 ORTHO05D008737 1.3e-90 337.0 274 63.5
Peaxi162Scf00076g01036 Petunia axillaris HOM05D006942 ORTHO05D008737 1.7e-90 336.7 291 57.7
MBI11_g05460_MAGBIO Magnolia biondii HOM05D006942 ORTHO05D008737 3.0e-90 335.9 280 62.9
MD12G1002500 Malus domestica HOM05D006942 ORTHO05D008737 3.0e-90 335.9 180 85.6
Duzib177G1195 Durio zibethinus HOM05D006942 ORTHO05D008737 3.9e-90 335.5 284 59.9
SpUn0001_1050 Schrenkiella parvula HOM05D006942 ORTHO05D008737 3.9e-90 335.5 278 60.4
GSVIVG01033386001 Vitis vinifera HOM05D006942 ORTHO05D008737 6.6e-90 334.7 180 83.9
PGR042G3330 Punica granatum HOM05D006942 ORTHO05D008737 8.6e-90 334.3 271 62.7
BcaB07g31088 Brassica carinata HOM05D006942 ORTHO05D008737 4.3e-89 332.0 273 62.3
BcaC04g22009 Brassica carinata HOM05D006942 ORTHO05D008737 4.3e-89 332.0 279 59.9
C09p24900 Brassica napus HOM05D006942 ORTHO05D008737 4.3e-89 332.0 279 59.9
BolC9t55381H Brassica oleracea HOM05D006942 ORTHO05D008737 4.3e-89 332.0 279 59.9
THA.LOC104823787 Tarenaya hassleriana HOM05D006942 ORTHO05D008737 4.3e-89 332.0 279 60.2
Ciclev10021582m.g Citrus clementina HOM05D006942 ORTHO05D008737 5.6e-89 331.6 264 62.5
A09p19530 Brassica napus HOM05D006942 ORTHO05D008737 1.2e-88 330.5 192 78.1
Gorai.007G287900 Gossypium raimondii HOM05D006942 ORTHO05D008737 1.2e-88 330.5 284 59.9
Gohir.D13G109500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 1.6e-88 330.1 277 61.4
Gorai.013G123100 Gossypium raimondii HOM05D006942 ORTHO05D008737 2.8e-88 329.3 186 81.2
Lalb_Chr24g0403081 Lupinus albus HOM05D006942 ORTHO05D008737 2.8e-88 329.3 279 62.4
MSTRG.19939 Avicennia marina HOM05D006942 ORTHO05D008737 4.7e-88 328.6 286 58.7
Glyma.19G110300 Glycine max HOM05D006942 ORTHO05D008737 4.7e-88 328.6 278 60.8
Sabra19G0041400 Salix brachista HOM05D006942 ORTHO05D008737 6.2e-88 328.2 269 62.1
AL1G64670 Arabidopsis lyrata HOM05D006942 ORTHO05D008737 8.1e-88 327.8 277 58.8
CARHR028870 Cardamine hirsuta HOM05D006942 ORTHO05D008737 1.1e-87 327.4 279 60.2
Haze_19409 Corylus avellana HOM05D006942 ORTHO05D008737 1.1e-87 327.4 313 56.5
Phvul.001G109600 Phaseolus vulgaris HOM05D006942 ORTHO05D008737 1.4e-87 327.0 279 60.9
arahy.Tifrunner.gnm1.ann1.0W916P Arachis hypogaea HOM05D006942 ORTHO05D008737 3.1e-87 325.9 292 58.9
Carub.0002s0962 Capsella rubella HOM05D006942 ORTHO05D008737 3.1e-87 325.9 279 60.2
SGA_v2.0_scaffold50G18512 Striga asiatica HOM05D006942 ORTHO05D008737 8.9e-87 324.3 191 79.6
Aqoxy2G00557 Aquilegia oxysepala HOM05D006942 ORTHO05D008737 1.2e-86 323.9 274 60.6
Gohir.A13G105500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 1.2e-86 323.9 272 61.4
Cc00_g08890 Coffea canephora HOM05D006942 ORTHO05D008737 1.5e-86 323.6 287 61.7
Lj1g0019871 Lotus japonicus HOM05D006942 ORTHO05D008737 2.0e-86 323.2 293 58.4
AT2G23840 Arabidopsis thaliana HOM05D006942 ORTHO05D008737 9.9e-86 320.9 277 58.5
Eucgr.A02087 Eucalyptus grandis HOM05D006942 ORTHO05D008737 9.9e-86 320.9 277 59.6
Glyma.16G042200 Glycine max HOM05D006942 ORTHO05D008737 1.3e-85 320.5 273 61.9
CDE10G0368 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 2.9e-85 319.3 277 58.8
Psat3g089160 Pisum sativum HOM05D006942 ORTHO05D008737 3.8e-85 318.9 288 59.7
VMungo1383G0897 Vigna mungo HOM05D006942 ORTHO05D008737 1.1e-84 317.4 273 60.1
Thhalv10008350m.g Eutrema salsugineum HOM05D006942 ORTHO05D008737 1.4e-84 317.0 179 80.4
TPR.G5873 Trifolium pratense HOM05D006942 ORTHO05D008737 1.4e-84 317.0 291 58.1
Medtr7g085420 Medicago truncatula HOM05D006942 ORTHO05D008737 5.4e-84 315.1 281 58.4
Migut.J01895 Erythranthe guttata HOM05D006942 ORTHO05D008737 7.1e-84 314.7 191 77.0
Eucgr.K01480 Eucalyptus grandis HOM05D006942 ORTHO05D008737 6.0e-83 311.6 191 74.3
ATR0697G165 Amborella trichopoda HOM05D006942 ORTHO05D008737 7.8e-83 311.2 182 78.0
Aa31LG2G1990 Aethionema arabicum HOM05D006942 ORTHO05D008737 4.3e-81 305.4 288 55.2
CSS0046453 Camellia sinensis var. sinensis HOM05D006942 ORTHO05D008737 5.2e-79 298.5 281 57.3
HPP92_018642 Vanilla planifolia HOM05D006942 ORTHO05D008737 2.0e-78 296.6 274 54.7
Lalb_Chr06g0173931 Lupinus albus HOM05D006942 ORTHO05D008737 5.8e-78 295.0 312 51.3
CDE06G2457 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 1.3e-77 293.9 190 71.1
TAR623G0107 Trochodendron aralioides HOM05D002140 ORTHO05D002382 4.9e-77 292.0 164 81.1
PGR142G1268 Punica granatum HOM05D006942 ORTHO05D008737 2.1e-75 286.6 286 53.8
EL10Ac3g06808 Beta vulgaris HOM05D006942 ORTHO05D008737 2.5e-73 279.6 234 60.3
Os07g0170200 Oryza sativa ssp. japonica HOM05D006942 ORTHO05D008737 1.8e-71 273.5 163 77.3
Prupe.7G002400 Prunus persica HOM05D006942 ORTHO05D008737 5.3e-71 271.9 158 79.1
Gohir.D11G268200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 1.2e-70 270.8 284 51.8
Lj2A357G77 Lonicera japonica HOM05D006942 ORTHO05D008737 3.4e-70 269.2 149 84.6
CiPaw.09G001300 Carya illinoinensis HOM05D006942 ORTHO05D008737 3.8e-69 265.8 149 82.6
Sabra13G0052800 Salix brachista HOM05D006942 ORTHO05D008737 1.1e-68 264.2 154 80.5
Actinidia38618 Actinidia chinensis HOM05D006942 ORTHO05D008737 2.1e-67 260.0 267 52.8
AUR62032674 Chenopodium quinoa HOM05D006942 ORTHO05D008737 6.0e-67 258.5 170 68.8
Sc13g0007650 Simmondsia chinensis HOM05D006942 ORTHO05D008737 7.4e-65 251.5 236 58.1
Ca_08258_v3 Cicer arietinum L. HOM05D006942 ORTHO05D008737 8.1e-64 248.1 149 77.2
Manes.09G142700 Manihot esculenta HOM05D006942 ORTHO05D008737 1.2e-59 234.2 220 57.3
Nitab4.5_0000911g0030 Nicotiana tabacum HOM05D006942 ORTHO05D008737 7.9e-59 231.5 224 54.0
AUR62032073 Chenopodium quinoa HOM05D006942 ORTHO05D008737 2.1e-56 223.4 164 63.4
arahy.Tifrunner.gnm1.ann1.T4HPZA Arachis hypogaea HOM05D006942 ORTHO05D008737 8.2e-56 221.5 292 46.6
Mapoly0043s0076 Marchantia polymorpha HOM05D006942 ORTHO05D008737 1.5e-54 217.2 179 55.3
AagrBONN_evm.TU.Sc2ySwM_344.2088 Anthoceros agrestis HOM05D006942 ORTHO05D008737 2.2e-53 213.4 194 50.5
Duzib128G0620 Durio zibethinus HOM05D006942 ORTHO05D008737 3.8e-53 212.6 235 51.1
Pp3c4_7620 Physcomitrium patens HOM05D006942 ORTHO05D008737 1.9e-52 210.3 180 54.4
Pp3c12_13900 Physcomitrium patens HOM05D006942 ORTHO05D008737 4.2e-52 209.1 180 53.3
SMO364G0530 Selaginella moellendorffii HOM05D006942 ORTHO05D008737 1.1e-47 194.5 186 48.9
Ah.04g153240 Amaranthus hybridus HOM05D000653 ORTHO05D003117 1.2e-46 191.0 176 54.5
unitig_85.g27430 Utricularia gibba HOM05D006942 ORTHO05D008737 3.4e-46 189.5 225 49.3
Oeu048436.1 Olea europaea HOM05D006942 ORTHO05D008737 2.1e-43 180.3 165 55.8
CBR_g603 Chara braunii HOM05D006942 ORTHO05D008737 1.1e-39 167.9 207 44.4
Potri.019G033200 Populus trichocarpa HOM05D006942 ORTHO05D008737 1.1e-39 167.9 268 39.2
Hund24842 Selenicereus undatus HOM05D006942 ORTHO05D008737 1.1e-39 167.9 326 35.0
Gohir.A11G258200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 3.8e-37 159.5 284 36.6
Actinidia17307 Actinidia chinensis HOM05D006942 ORTHO05D008737 6.5e-37 158.7 107 70.1
PRCOL_00006758 Prasinoderma coloniale HOM05D006942 ORTHO05D008737 6.1e-35 152.1 148 49.3
SalBow2G1960 Salvia bowleyana HOM05D006942 ORTHO05D008737 5.1e-34 149.1 91 73.6
Cre04.g217903 Chlamydomonas reinhardtii HOM05D006942 ORTHO05D008737 4.4e-33 146.0 176 42.6
SEGI_36650 Sequoiadendron giganteum HOM05D006942 ORTHO05D008737 2.4e-23 113.6 76 72.4
Zm00001eb300960 Zea mays HOM05D006942 ORTHO05D008737 4.7e-11 72.8 41 75.6
Pp3s30_1160 Physcomitrium patens HOM05D006942 ORTHO05D317230 3.1e-07 60.1 62 40.3
Nitab4.5_0000001g0050 Nicotiana tabacum HOM05D006942 ORTHO05D008737 7.0e-07 58.9 126 31.0
CSS0026826 Camellia sinensis var. sinensis HOM05D006942 ORTHO05D008737 1.2e-06 58.2 50 56.0


User provided reference genes

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