Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_019841 Daucus carota HOM05D003703 ORTHO05D004278 1.7e-57 225.7 107 100.0
DCAR_013556 Daucus carota HOM05D003703 ORTHO05D004278 4.9e-41 171.0 107 78.5
CSS0005195 Camellia sinensis var. sinensis HOM05D003703 ORTHO05D004278 2.1e-39 165.6 107 74.8
QL07p023397 Quercus lobata HOM05D003703 ORTHO05D004278 1.3e-33 146.4 108 65.7
DCAR_017017 Daucus carota HOM05D003703 ORTHO05D004278 2.9e-33 145.2 105 74.3
DCAR_017016 Daucus carota HOM05D003703 ORTHO05D004278 6.4e-33 144.1 105 73.3
Hma1.2p1_0183F.1_g080800 Hydrangea macrophylla HOM05D003703 ORTHO05D004278 6.4e-33 144.1 108 66.7
CiPaw.09G031500 Carya illinoinensis HOM05D003703 ORTHO05D004278 2.4e-32 142.1 110 60.9
CiPaw.10G027200 Carya illinoinensis HOM05D003703 ORTHO05D004278 2.4e-32 142.1 112 59.8
Duzib093G1286 Durio zibethinus HOM05D003703 ORTHO05D004278 2.4e-32 142.1 110 65.5
Thecc.05G169900 Theobroma cacao HOM05D003703 ORTHO05D004278 2.4e-32 142.1 111 64.0
Manes.08G045500 Manihot esculenta HOM05D003703 ORTHO05D004278 4.2e-32 141.4 112 65.2
Potri.016G047800 Populus trichocarpa HOM05D003703 ORTHO05D004278 4.2e-32 141.4 108 63.9
Manes.09G033600 Manihot esculenta HOM05D003703 ORTHO05D004278 7.1e-32 140.6 113 65.5
Nitab4.5_0000016g0390 Nicotiana tabacum HOM05D003703 ORTHO05D004278 9.3e-32 140.2 110 63.6
Cpa.g.c33371 Carica papaya HOM05D003703 ORTHO05D004278 1.6e-31 139.4 117 60.7
Sabra06G0146400 Salix brachista HOM05D003703 ORTHO05D004278 1.6e-31 139.4 108 62.0
Atru.chr8.1077 Acer truncatum HOM05D003703 ORTHO05D004278 2.1e-31 139.0 114 61.4
HanXRQChr10g0300741 Helianthus annuus HOM05D003703 ORTHO05D004278 2.1e-31 139.0 107 66.4
Nitab4.5_0002035g0010 Nicotiana tabacum HOM05D003703 ORTHO05D004278 2.7e-31 138.7 108 63.9
Duzib106G1084 Durio zibethinus HOM05D003703 ORTHO05D004278 6.0e-31 137.5 110 61.8
Potri.006G191100 Populus trichocarpa HOM05D003703 ORTHO05D004278 7.8e-31 137.1 108 63.9
Ciclev10012846m.g Citrus clementina HOM05D003703 ORTHO05D004278 1.3e-30 136.3 109 63.3
COL.COLO4_36150 Corchorus olitorius HOM05D003703 ORTHO05D004278 1.7e-30 136.0 112 61.6
ECA247G0725 Erigeron canadensis HOM05D003703 ORTHO05D004278 3.9e-30 134.8 114 63.2
Sabra16G0051300 Salix brachista HOM05D003703 ORTHO05D004278 5.1e-30 134.4 108 60.2
Gohir.D09G123500 Gossypium hirsutum HOM05D003703 ORTHO05D004278 8.7e-30 133.7 112 60.7
Gorai.006G142100 Gossypium raimondii HOM05D003703 ORTHO05D004278 1.1e-29 133.3 112 60.7
CAN.G515.11 Capsicum annuum HOM05D003703 ORTHO05D004278 1.5e-29 132.9 111 61.3
Lju124C28G5 Lonicera japonica HOM05D003703 ORTHO05D004278 1.5e-29 132.9 107 60.7
Gohir.D04G098100 Gossypium hirsutum HOM05D003703 ORTHO05D004278 1.9e-29 132.5 110 64.5
Gorai.006G067100 Gossypium raimondii HOM05D003703 ORTHO05D004278 1.9e-29 132.5 110 64.5
Gohir.A09G127300 Gossypium hirsutum HOM05D003703 ORTHO05D004278 3.3e-29 131.7 112 59.8
Actinidia38577 Actinidia chinensis HOM05D003703 ORTHO05D004278 5.6e-29 131.0 104 63.5
Peaxi162Scf00258g00023 Petunia axillaris HOM05D003703 ORTHO05D004278 5.6e-29 131.0 118 56.8
Migut.K00046 Erythranthe guttata HOM05D003703 ORTHO05D004278 9.6e-29 130.2 115 60.9
Lsat_1_v5_gn_9_26721 Lactuca sativa HOM05D003703 ORTHO05D004278 9.6e-29 130.2 116 60.3
Rhsim03G0008400 Rhododendron simsii HOM05D003703 ORTHO05D004278 9.6e-29 130.2 109 63.3
Actinidia40438 Actinidia chinensis HOM05D003703 ORTHO05D004278 1.3e-28 129.8 108 64.8
Haze_19973 Corylus avellana HOM05D003703 ORTHO05D004278 1.6e-28 129.4 112 58.9
Solyc03g063550.1 Solanum lycopersicum HOM05D003703 ORTHO05D004278 1.6e-28 129.4 107 62.6
Sopen03g016210 Solanum pennellii HOM05D003703 ORTHO05D004278 1.6e-28 129.4 107 62.6
TAR633G0624 Trochodendron aralioides HOM05D004867 ORTHO05D005729 1.6e-28 129.4 107 57.9
Lsat_1_v5_gn_8_74300 Lactuca sativa HOM05D003703 ORTHO05D004278 2.1e-28 129.0 107 61.7
PGSC0003DMG400009700 Solanum tuberosum HOM05D003703 ORTHO05D004278 2.8e-28 128.6 107 62.6
Gohir.D01G177600 Gossypium hirsutum HOM05D003703 ORTHO05D004278 3.6e-28 128.3 111 64.0
Gohir.A01G192300 Gossypium hirsutum HOM05D003703 ORTHO05D004278 6.2e-28 127.5 111 64.0
Gorai.002G225600 Gossypium raimondii HOM05D003703 ORTHO05D004278 1.1e-27 126.7 111 64.0
Oeu035192.1 Olea europaea HOM05D003703 ORTHO05D004278 1.4e-27 126.3 107 58.9
TAR369G1018 Trochodendron aralioides HOM05D003703 ORTHO05D004278 4.0e-27 124.8 112 56.2
Lj2P370T14 Lonicera japonica HOM05D003703 ORTHO05D004278 5.3e-27 124.4 108 58.3
RcHm_v2.0_Chr3g0479981 Rosa chinensis HOM05D003703 ORTHO05D004278 5.3e-27 124.4 119 62.2
FAN02G0416 Fragaria x ananassa HOM05D003703 ORTHO05D004278 6.9e-27 124.0 118 61.9
MD14G1059200 Malus domestica HOM05D003703 ORTHO05D004278 6.9e-27 124.0 119 58.0
Actinidia22024 Actinidia chinensis HOM05D003703 ORTHO05D004278 9.0e-27 123.6 108 62.0
FvH4_6g22530 Fragaria vesca HOM05D003703 ORTHO05D004278 1.2e-26 123.2 118 61.0
FAN14G3432 Fragaria x ananassa HOM05D003703 ORTHO05D004278 1.2e-26 123.2 118 61.0
FAN14G3905 Fragaria x ananassa HOM05D003703 ORTHO05D004278 1.2e-26 123.2 118 61.0
FAN09G0581 Fragaria x ananassa HOM05D003703 ORTHO05D004278 2.6e-26 122.1 118 61.0
FAN05G5107 Fragaria x ananassa HOM05D003703 ORTHO05D004278 3.4e-26 121.7 118 61.0
Dinv24085 Davidia involucrata HOM05D001227 ORTHO05D001082 4.5e-26 121.3 89 66.3
Aqoxy2G00073 Aquilegia oxysepala HOM05D003703 ORTHO05D004278 5.8e-26 120.9 112 55.4
PSO675G1999 Papaver somniferum HOM05D003703 ORTHO05D004278 5.8e-26 120.9 126 52.4
Prupe.7G075500 Prunus persica HOM05D003703 ORTHO05D004278 5.8e-26 120.9 118 58.5
AUR62024314 Chenopodium quinoa HOM05D003703 ORTHO05D004278 7.6e-26 120.6 138 51.4
MSTRG.10837 Avicennia marina HOM05D003703 ORTHO05D004278 1.3e-25 119.8 115 56.5
MSTRG.6472 Avicennia marina HOM05D003703 ORTHO05D004278 1.3e-25 119.8 111 56.8
Cc06_g16110 Coffea canephora HOM05D003703 ORTHO05D004278 1.3e-25 119.8 116 54.3
MD12G1058500 Malus domestica HOM05D003703 ORTHO05D004278 2.2e-25 119.0 118 56.8
SGA_v2.0_scaffold94G28431 Striga asiatica HOM05D003703 ORTHO05D004278 3.8e-25 118.2 122 52.5
TWI53G0257 Tripterygium wilfordii HOM05D003703 ORTHO05D004278 4.9e-25 117.9 111 58.6
AUR62012046 Chenopodium quinoa HOM05D003703 ORTHO05D004278 6.4e-25 117.5 137 49.6
MSTRG.19899 Avicennia marina HOM05D003703 ORTHO05D004278 8.4e-25 117.1 111 56.8
Cfa020181 Carpinus fangiana HOM05D003703 ORTHO05D004278 8.4e-25 117.1 116 54.3
Lalb_Chr15g0078951 Lupinus albus HOM05D003703 ORTHO05D004278 1.4e-24 116.3 115 54.8
Oeu007772.1 Olea europaea HOM05D003703 ORTHO05D004278 1.9e-24 115.9 107 57.0
SalBow1G5050 Salvia bowleyana HOM05D003703 ORTHO05D004278 1.9e-24 115.9 107 54.2
THA.LOC104826767 Tarenaya hassleriana HOM05D003703 ORTHO05D004278 1.9e-24 115.9 121 54.5
EL10Ac3g06932 Beta vulgaris HOM05D003703 ORTHO05D004278 3.2e-24 115.2 133 49.6
MBI01_g36100_MAGBIO Magnolia biondii HOM05D003703 ORTHO05D004278 4.2e-24 114.8 110 52.7
TWI74G0378 Tripterygium wilfordii HOM05D003703 ORTHO05D004278 4.2e-24 114.8 109 57.8
Lalb_Chr18g0047801 Lupinus albus HOM05D003703 ORTHO05D004278 9.3e-24 113.6 113 56.6
Ah.13g075990 Amaranthus hybridus HOM05D003703 ORTHO05D004278 2.7e-23 112.1 131 51.1
Migut.J01826 Erythranthe guttata HOM05D003703 ORTHO05D004278 3.5e-23 111.7 112 57.1
PSO339G4803 Papaver somniferum HOM05D003703 ORTHO05D004278 7.9e-23 110.5 121 48.8
THA.LOC104802486 Tarenaya hassleriana HOM05D003703 ORTHO05D004278 1.0e-22 110.2 121 50.4
SalBow1G5631 Salvia bowleyana HOM05D003703 ORTHO05D004278 1.3e-22 109.8 107 53.3
AL6G16900 Arabidopsis lyrata HOM05D003703 ORTHO05D004278 2.3e-22 109.0 118 53.4
Sed0017921 Sechium edule HOM05D003703 ORTHO05D004278 3.0e-22 108.6 111 57.7
ClCG09G019210 Citrullus lanatus HOM05D003703 ORTHO05D004278 3.9e-22 108.2 110 53.6
Eucgr.K01832 Eucalyptus grandis HOM05D003703 ORTHO05D004278 8.7e-22 107.1 117 49.6
PSO017G5564 Papaver somniferum HOM05D003703 ORTHO05D004278 8.7e-22 107.1 120 50.0
BraA10t45001Z Brassica rapa HOM05D003703 ORTHO05D004278 1.5e-21 106.3 119 53.8
Ah.04g152400 Amaranthus hybridus HOM05D003703 ORTHO05D004278 1.9e-21 105.9 130 48.5
BcaC06g32542 Brassica carinata HOM05D003703 ORTHO05D004278 1.9e-21 105.9 121 54.5
CsaV3_5G027200 Cucumis sativus L. HOM05D003703 ORTHO05D004278 1.9e-21 105.9 113 52.2
Sc25g0005120 Simmondsia chinensis HOM05D003703 ORTHO05D004278 1.9e-21 105.9 108 52.8
Glyma.02G178400 Glycine max HOM05D003703 ORTHO05D004278 2.5e-21 105.5 112 52.7
Sp6g36065 Schrenkiella parvula HOM05D003703 ORTHO05D004278 4.3e-21 104.8 119 52.1
A10p29590 Brassica napus HOM05D003703 ORTHO05D004278 7.4e-21 104.0 119 52.1
Carub.0006s0568 Capsella rubella HOM05D003703 ORTHO05D004278 7.4e-21 104.0 126 46.8
MELO3C021570.2 Cucumis melo HOM05D003703 ORTHO05D004278 7.4e-21 104.0 114 51.8
PSO063G6729 Papaver somniferum HOM05D003703 ORTHO05D004278 7.4e-21 104.0 121 48.8
AT5G06790 Arabidopsis thaliana HOM05D003703 ORTHO05D004278 1.3e-20 103.2 115 50.4
Thhalv10014619m.g Eutrema salsugineum HOM05D003703 ORTHO05D004278 1.3e-20 103.2 129 47.3
Glyma.09G112700 Glycine max HOM05D003703 ORTHO05D004278 1.3e-20 103.2 114 50.9
Medtr7g093040 Medicago truncatula HOM05D003703 ORTHO05D004278 2.1e-20 102.4 109 49.5
AL5G39600 Arabidopsis lyrata HOM05D003703 ORTHO05D004278 3.7e-20 101.7 110 51.8
CARHR206390 Cardamine hirsuta HOM05D003703 ORTHO05D004278 3.7e-20 101.7 121 50.4
AT3G57950 Arabidopsis thaliana HOM05D003703 ORTHO05D004278 4.8e-20 101.3 113 49.6
BcaB02g08287 Brassica carinata HOM05D003703 ORTHO05D004278 4.8e-20 101.3 113 54.0
BraA04t16007Z Brassica rapa HOM05D003703 ORTHO05D004278 6.2e-20 100.9 111 54.1
A04p02830 Brassica napus HOM05D003703 ORTHO05D004278 1.1e-19 100.1 111 53.2
ECA236G4442 Erigeron canadensis HOM05D003703 ORTHO05D004278 1.1e-19 100.1 110 50.9
SGA_v2.0_scaffold4546G54500 Striga asiatica HOM05D003703 ORTHO05D004278 1.8e-19 99.4 118 50.8
ECA248G0990 Erigeron canadensis HOM05D003703 ORTHO05D004278 4.0e-19 98.2 114 50.9
BolC4t25006H Brassica oleracea HOM05D003703 ORTHO05D004278 5.3e-19 97.8 114 50.9
CANSAT64G0621 Cannabis sativa HOM05D003703 ORTHO05D004278 5.3e-19 97.8 138 47.1
A09p50780 Brassica napus HOM05D003703 ORTHO05D004278 6.9e-19 97.4 113 50.4
BcaC02g09974 Brassica carinata HOM05D003703 ORTHO05D004278 9.0e-19 97.1 113 50.4
BraA09t40525Z Brassica rapa HOM05D003703 ORTHO05D004278 9.0e-19 97.1 112 50.0
ClCG10G017430 Citrullus lanatus HOM05D003703 ORTHO05D004278 9.0e-19 97.1 112 50.9
Sp5g04770 Schrenkiella parvula HOM05D003703 ORTHO05D004278 9.0e-19 97.1 114 50.0
BcaC07g40166 Brassica carinata HOM05D003703 ORTHO05D004278 1.2e-18 96.7 113 48.7
BolC8t50948H Brassica oleracea HOM05D003703 ORTHO05D004278 1.2e-18 96.7 111 50.5
C04p34420 Brassica napus HOM05D003703 ORTHO05D004278 1.5e-18 96.3 112 50.9
Thhalv10006259m.g Eutrema salsugineum HOM05D003703 ORTHO05D004278 1.5e-18 96.3 113 51.3
C08p33500 Brassica napus HOM05D003703 ORTHO05D004278 2.6e-18 95.5 111 50.5
Ca_08513_v3 Cicer arietinum L. HOM05D003703 ORTHO05D004278 2.6e-18 95.5 112 50.0
arahy.Tifrunner.gnm1.ann1.6W7ZDH Arachis hypogaea HOM05D003703 ORTHO05D004278 3.4e-18 95.1 116 50.0
Lalb_Chr07g0188981 Lupinus albus HOM05D003703 ORTHO05D004278 3.4e-18 95.1 129 41.9
SalBow6G1024 Salvia bowleyana HOM05D003703 ORTHO05D004278 4.5e-18 94.7 107 51.4
SalBow6G3273 Salvia bowleyana HOM05D003703 ORTHO05D004278 4.5e-18 94.7 107 51.4
BcaC06g32394 Brassica carinata HOM05D003703 ORTHO05D004278 5.8e-18 94.4 128 45.3
BolC9t59739H Brassica oleracea HOM05D003703 ORTHO05D004278 5.8e-18 94.4 128 45.3
Carub.0005s2479 Capsella rubella HOM05D003703 ORTHO05D004278 5.8e-18 94.4 114 46.5
C09p69970 Brassica napus HOM05D003703 ORTHO05D004278 7.6e-18 94.0 129 45.0
Sed0013585 Sechium edule HOM05D003703 ORTHO05D004278 7.6e-18 94.0 109 50.5
HanXRQChr13g0389341 Helianthus annuus HOM05D003703 ORTHO05D004278 9.9e-18 93.6 105 50.5
PGR004G2865 Punica granatum HOM05D003703 ORTHO05D004278 9.9e-18 93.6 121 50.4
BcaC02g09973 Brassica carinata HOM05D003703 ORTHO05D004278 1.3e-17 93.2 105 52.4
CARHR168260 Cardamine hirsuta HOM05D003703 ORTHO05D004278 2.9e-17 92.0 116 48.3
Lj1g0027593 Lotus japonicus HOM05D003703 ORTHO05D004278 4.9e-17 91.3 114 50.9
Lj5g0003065 Lotus japonicus HOM05D003703 ORTHO05D004278 4.9e-17 91.3 111 46.8
Sc13g0002220 Simmondsia chinensis HOM05D003703 ORTHO05D004278 1.1e-16 90.1 118 45.8
CsaV3_3G038930 Cucumis sativus L. HOM05D003703 ORTHO05D004278 1.4e-16 89.7 121 47.9
Psat3g069120 Pisum sativum HOM05D003703 ORTHO05D004278 1.9e-16 89.4 115 47.0
Glyma.03G143800 Glycine max HOM05D003703 ORTHO05D004278 3.2e-16 88.6 125 46.4
PGR142G3046 Punica granatum HOM05D003703 ORTHO05D004278 3.2e-16 88.6 126 45.2
Aa31LG10G12650 Aethionema arabicum HOM05D003703 ORTHO05D004278 7.1e-16 87.4 109 48.6
VMungo0720G2172 Vigna mungo HOM05D003703 ORTHO05D004278 7.1e-16 87.4 117 47.0
C04p34430 Brassica napus HOM05D003703 ORTHO05D004278 9.3e-16 87.0 105 49.5
BcaB02g08285 Brassica carinata HOM05D003703 ORTHO05D004278 1.2e-15 86.7 109 48.6
Phvul.001G141500 Phaseolus vulgaris HOM05D003703 ORTHO05D004278 1.2e-15 86.7 121 47.9
Phvul.007G258900 Phaseolus vulgaris HOM05D003703 ORTHO05D004278 1.2e-15 86.7 119 46.2
TPR.G18214 Trifolium pratense HOM05D003703 ORTHO05D004278 1.2e-15 86.7 119 43.7
THA.LOC104824607 Tarenaya hassleriana HOM05D003703 ORTHO05D004278 1.6e-15 86.3 111 47.7
VMungo1383G3663 Vigna mungo HOM05D003703 ORTHO05D004278 6.0e-15 84.3 124 46.8
TPR.G27747 Trifolium pratense HOM05D003703 ORTHO05D004278 2.3e-14 82.4 117 40.2
Psat6g128520 Pisum sativum HOM05D003703 ORTHO05D004278 3.0e-14 82.0 117 41.9
Glyma.19G146900 Glycine max HOM05D003703 ORTHO05D004278 3.9e-14 81.6 124 43.5
Ca_25700_v3 Cicer arietinum L. HOM05D003703 ORTHO05D004278 5.1e-14 81.3 119 40.3
CDE05G1581 Ceratophyllum demersum HOM05D003703 ORTHO05D004278 1.1e-13 80.1 88 47.7
SHI16104 Sapria himalayana HOM05D003703 ORTHO05D004278 1.1e-13 80.1 108 47.2
Sc19g0006980 Simmondsia chinensis HOM05D003703 ORTHO05D004278 1.1e-13 80.1 64 67.2
CDE02G1004 Ceratophyllum demersum HOM05D003703 ORTHO05D004278 1.5e-13 79.7 88 47.7
Sp4g24360 Schrenkiella parvula HOM05D003703 ORTHO05D004278 2.5e-13 79.0 106 47.2
Os09g0279200 Oryza sativa ssp. japonica HOM05D003703 ORTHO05D004278 3.3e-13 78.6 86 47.7
Os04g0665666 Oryza sativa ssp. japonica HOM05D003703 ORTHO05D004278 1.6e-12 76.3 134 35.1
BcaC02g12466 Brassica carinata HOM05D003703 ORTHO05D004278 3.7e-12 75.1 76 52.6
BolC4t21971H Brassica oleracea HOM05D003703 ORTHO05D004278 3.7e-12 75.1 76 52.6
AL4G40540 Arabidopsis lyrata HOM05D003703 ORTHO05D004278 6.2e-12 74.3 71 56.3
C04p03340 Brassica napus HOM05D003703 ORTHO05D004278 6.2e-12 74.3 76 52.6
Carub.0004s2452 Capsella rubella HOM05D003703 ORTHO05D004278 8.2e-12 73.9 78 53.8
BraA05t19267Z Brassica rapa HOM05D003703 ORTHO05D004278 1.1e-11 73.6 76 51.3
Eucgr.A02445 Eucalyptus grandis HOM05D003703 ORTHO05D004278 1.1e-11 73.6 116 46.6
Medtr1g053900 Medicago truncatula HOM05D003703 ORTHO05D004278 1.8e-11 72.8 108 39.8
AT2G42180 Arabidopsis thaliana HOM05D003703 ORTHO05D004278 3.1e-11 72.0 75 52.0
BcaNung04405 Brassica carinata HOM05D003703 ORTHO05D004278 4.0e-11 71.6 71 53.5
A05p02750 Brassica napus HOM05D003703 ORTHO05D004278 9.0e-11 70.5 76 50.0
Aa31sc24G60 Aethionema arabicum HOM05D003703 ORTHO05D004278 1.3e-09 66.6 63 57.1
ATR0605G366 Amborella trichopoda HOM05D003703 ORTHO05D004278 3.2e-08 62.0 81 42.0
Zm00001eb067170 Zea mays HOM05D003703 ORTHO05D004278 4.2e-08 61.6 96 37.5


User provided reference genes

Program Settings