Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_019825 Daucus carota HOM05D005081 ORTHO05D005506 1.6e-121 439.5 238 100.0
Cc00_g16170 Coffea canephora HOM05D005081 ORTHO05D005506 4.9e-25 119.0 253 40.7
FAN22G0520 Fragaria x ananassa HOM05D005081 ORTHO05D005506 4.9e-25 119.0 249 40.2
QL11p009451 Quercus lobata HOM05D005081 ORTHO05D005506 4.9e-25 119.0 251 42.2
FAN12G4058 Fragaria x ananassa HOM05D005081 ORTHO05D005506 1.1e-24 117.9 249 39.0
FAN07G0684 Fragaria x ananassa HOM05D005081 ORTHO05D005506 2.4e-24 116.7 247 38.9
FvH4_4g06450 Fragaria vesca HOM05D005081 ORTHO05D005506 5.4e-24 115.5 249 38.6
MSTRG.10457 Avicennia marina HOM05D005081 ORTHO05D005506 7.1e-24 115.2 249 41.0
FAN17G0390 Fragaria x ananassa HOM05D005081 ORTHO05D005506 1.6e-23 114.0 249 39.4
Cpa.g.sc115.44 Carica papaya HOM05D005081 ORTHO05D005506 2.1e-23 113.6 243 42.0
CiPaw.15G154600 Carya illinoinensis HOM05D005081 ORTHO05D005506 4.6e-23 112.5 259 38.6
RcHm_v2.0_Chr4g0398241 Rosa chinensis HOM05D005081 ORTHO05D005506 2.3e-22 110.2 247 39.3
Hund26317 Selenicereus undatus HOM05D005081 ORTHO05D005506 3.0e-22 109.8 253 38.7
GSVIVG01035163001 Vitis vinifera HOM05D005081 ORTHO05D005506 3.9e-22 109.4 252 40.1
Oeu044689.1 Olea europaea HOM05D005081 ORTHO05D005506 1.9e-21 107.1 246 38.2
Duzib170G0058 Durio zibethinus HOM05D005081 ORTHO05D005506 3.3e-21 106.3 229 37.6
Migut.L01903 Erythranthe guttata HOM05D005081 ORTHO05D005506 4.3e-21 105.9 247 39.3
MSTRG.26528 Avicennia marina HOM05D005081 ORTHO05D005506 9.6e-21 104.8 253 37.5
TWI32G0620 Tripterygium wilfordii HOM05D005081 ORTHO05D005506 3.6e-20 102.8 250 38.4
Actinidia38513 Actinidia chinensis HOM05D005081 ORTHO05D005506 1.1e-19 101.3 253 38.3
AUR62033253 Chenopodium quinoa HOM05D005081 ORTHO05D005506 1.4e-19 100.9 255 37.3
Prupe.1G067800 Prunus persica HOM05D005081 ORTHO05D005506 1.4e-19 100.9 204 41.2
CiPaw.16G103000 Carya illinoinensis HOM05D005081 ORTHO05D005506 1.8e-19 100.5 260 36.2
AUR62021338 Chenopodium quinoa HOM05D005081 ORTHO05D005506 2.4e-19 100.1 250 35.6
Rhsim01G0113200 Rhododendron simsii HOM05D005081 ORTHO05D005506 4.0e-19 99.4 257 37.4
CsaV3_1G032220 Cucumis sativus L. HOM05D005081 ORTHO05D005506 5.3e-19 99.0 272 36.0
Nitab4.5_0011475g0010 Nicotiana tabacum HOM05D005081 ORTHO05D005506 5.3e-19 99.0 253 35.2
SGA_v2.0_scaffold63G21842 Striga asiatica HOM05D005081 ORTHO05D005506 5.3e-19 99.0 250 36.4
Actinidia29969 Actinidia chinensis HOM05D005081 ORTHO05D005506 6.9e-19 98.6 258 34.1
EL10Ac8g18324 Beta vulgaris HOM05D005081 ORTHO05D005506 6.9e-19 98.6 255 34.5
Atru.chr12.2077 Acer truncatum HOM05D005081 ORTHO05D005506 1.2e-18 97.8 248 34.7
Haze_19038 Corylus avellana HOM05D001026 ORTHO05D003027 1.2e-18 97.8 252 38.5
Sed0020945 Sechium edule HOM05D005081 ORTHO05D005506 1.5e-18 97.4 253 37.2
Solyc05g046310.3 Solanum lycopersicum HOM05D005081 ORTHO05D005506 1.5e-18 97.4 249 36.5
MELO3C017390.2 Cucumis melo HOM05D005081 ORTHO05D005506 2.0e-18 97.1 271 35.8
Sc08g0004640 Simmondsia chinensis HOM05D005081 ORTHO05D005506 2.0e-18 97.1 254 35.0
Hma1.2p1_0022F.1_g014783 Hydrangea macrophylla HOM05D005081 ORTHO05D005506 2.6e-18 96.7 253 36.4
Aqoxy7G02679 Aquilegia oxysepala HOM05D005081 ORTHO05D005506 3.4e-18 96.3 246 35.4
PGSC0003DMG400013692 Solanum tuberosum HOM05D005081 ORTHO05D005506 3.4e-18 96.3 254 35.4
CSS0043250 Camellia sinensis var. sinensis HOM05D005081 ORTHO05D005506 4.5e-18 95.9 263 36.9
Ciclev10012648m.g Citrus clementina HOM05D005081 ORTHO05D005506 5.8e-18 95.5 250 34.8
TAR625G0352 Trochodendron aralioides HOM05D005081 ORTHO05D005506 5.8e-18 95.5 251 36.7
Gohir.A05G408500 Gossypium hirsutum HOM05D005081 ORTHO05D005506 7.6e-18 95.1 218 36.2
Gohir.D04G006900 Gossypium hirsutum HOM05D005081 ORTHO05D005506 7.6e-18 95.1 218 36.2
Sopen00g006190 Solanum pennellii HOM05D005081 ORTHO05D005506 7.6e-18 95.1 255 35.3
Thecc.09G189400 Theobroma cacao HOM05D005081 ORTHO05D005506 7.6e-18 95.1 236 36.0
Nitab4.5_0010835g0010 Nicotiana tabacum HOM05D005081 ORTHO05D005506 9.9e-18 94.7 250 35.6
Sabra06G0052800 Salix brachista HOM05D005081 ORTHO05D005506 9.9e-18 94.7 280 35.0
Gorai.012G008600 Gossypium raimondii HOM05D005081 ORTHO05D005506 1.7e-17 94.0 218 35.8
Sed0028150 Sechium edule HOM05D005081 ORTHO05D005506 1.7e-17 94.0 248 37.9
Duzib168G1013 Durio zibethinus HOM05D005081 ORTHO05D005506 2.2e-17 93.6 220 34.5
Peaxi162Scf00315g00813 Petunia axillaris HOM05D005081 ORTHO05D005506 3.8e-17 92.8 255 36.1
PGR044G2548 Punica granatum HOM05D005081 ORTHO05D005506 3.8e-17 92.8 255 36.5
THA.LOC104815319 Tarenaya hassleriana HOM05D005081 ORTHO05D005506 4.9e-17 92.4 241 34.0
Cc10_g11560 Coffea canephora HOM05D005081 ORTHO05D005506 6.4e-17 92.0 222 39.6
Oeu008926.1 Olea europaea HOM05D005081 ORTHO05D005506 6.4e-17 92.0 251 34.3
Peaxi162Scf00889g00221 Petunia axillaris HOM05D005081 ORTHO05D005506 6.4e-17 92.0 254 38.2
Nitab4.5_0000833g0060 Nicotiana tabacum HOM05D005081 ORTHO05D005506 8.4e-17 91.7 253 35.6
ClCG06G014000 Citrullus lanatus HOM05D005081 ORTHO05D005506 1.4e-16 90.9 266 36.8
MD13G1236100 Malus domestica HOM05D005081 ORTHO05D005506 1.4e-16 90.9 223 36.8
Nitab4.5_0000053g0180 Nicotiana tabacum HOM05D005081 ORTHO05D005506 1.4e-16 90.9 253 35.2
TAR383G1035 Trochodendron aralioides HOM05D005081 ORTHO05D005506 1.4e-16 90.9 229 38.0
vmacro20793 Vaccinium macrocarpon HOM05D005081 ORTHO05D005506 1.9e-16 90.5 260 34.6
Ah.14g083630 Amaranthus hybridus HOM05D005081 ORTHO05D005506 3.2e-16 89.7 247 33.6
Dinv02618 Davidia involucrata HOM05D005081 ORTHO05D005506 5.4e-16 89.0 194 41.8
Lj4g0023825 Lotus japonicus HOM05D005081 ORTHO05D005506 1.6e-15 87.4 240 35.0
Manes.15G189400 Manihot esculenta HOM05D005081 ORTHO05D005506 2.7e-15 86.7 247 35.2
HanXRQChr03g0067191 Helianthus annuus HOM05D005081 ORTHO05D005506 3.5e-15 86.3 215 38.1
unitig_899.g15188 Utricularia gibba HOM05D005081 ORTHO05D005506 3.5e-15 86.3 227 38.3
Potri.018G132600 Populus trichocarpa HOM05D005081 ORTHO05D005506 4.6e-15 85.9 271 34.3
AT5G35320 Arabidopsis thaliana HOM05D005081 ORTHO05D005506 7.9e-15 85.1 247 35.6
Medtr8g101480 Medicago truncatula HOM05D005081 ORTHO05D005506 1.0e-14 84.7 235 36.2
SalBow6G6882 Salvia bowleyana HOM05D005081 ORTHO05D005506 1.8e-14 84.0 250 33.6
Potri.006G070900 Populus trichocarpa HOM05D005081 ORTHO05D005506 2.3e-14 83.6 280 31.8
BraA03t13610Z Brassica rapa HOM05D005081 ORTHO05D005506 3.0e-14 83.2 239 35.6
Eucgr.C02188 Eucalyptus grandis HOM05D005081 ORTHO05D005506 3.9e-14 82.8 271 32.1
PSO063G3463 Papaver somniferum HOM05D005081 ORTHO05D005506 3.9e-14 82.8 255 33.3
CANSAT80G2033 Cannabis sativa HOM05D005081 ORTHO05D005506 5.1e-14 82.4 264 31.8
Thhalv10003466m.g Eutrema salsugineum HOM05D005081 ORTHO05D005506 5.1e-14 82.4 246 36.6
Hma1.2p1_0022F.1_g014780 Hydrangea macrophylla HOM05D005081 ORTHO05D005506 6.7e-14 82.0 236 34.3
Psat7g022000 Pisum sativum HOM05D005081 ORTHO05D005506 8.7e-14 81.6 143 45.5
A03p44750 Brassica napus HOM05D005081 ORTHO05D005506 1.1e-13 81.3 239 35.6
Hund09052 Selenicereus undatus HOM05D005081 ORTHO05D005506 1.1e-13 81.3 255 32.9
Carub.0007s3114 Capsella rubella HOM05D005081 ORTHO05D005506 1.5e-13 80.9 248 35.5
Aa31LG4G14880 Aethionema arabicum HOM05D005081 ORTHO05D005506 3.3e-13 79.7 242 36.0
PSO170G2950 Papaver somniferum HOM05D005081 ORTHO05D005506 4.3e-13 79.3 233 33.0
Lalb_Chr05g0223691 Lupinus albus HOM05D005081 ORTHO05D005506 5.6e-13 79.0 255 36.1
THA.LOC104808906 Tarenaya hassleriana HOM05D005081 ORTHO05D005506 9.6e-13 78.2 220 31.8
AL3G43930 Arabidopsis lyrata HOM05D005081 ORTHO05D005506 1.3e-12 77.8 234 33.3
Lsat_1_v5_gn_7_59220 Lactuca sativa HOM05D005081 ORTHO05D005506 1.3e-12 77.8 231 36.8
Carub.0003s2733 Capsella rubella HOM05D005081 ORTHO05D005506 1.6e-12 77.4 237 33.3
Sp3g25120 Schrenkiella parvula HOM05D005081 ORTHO05D005506 1.6e-12 77.4 250 33.6
AL7G44130 Arabidopsis lyrata HOM05D005081 ORTHO05D005506 2.1e-12 77.0 249 33.7
CARHR217350 Cardamine hirsuta HOM05D005081 ORTHO05D005506 6.2e-12 75.5 243 34.6
Ca_17410_v3 Cicer arietinum L. HOM05D005081 ORTHO05D005506 6.2e-12 75.5 229 35.8
MBI16_g18201_MAGBIO Magnolia biondii HOM05D005081 ORTHO05D005506 8.1e-12 75.1 250 31.2
THA.LOC104826579 Tarenaya hassleriana HOM05D005081 ORTHO05D005506 8.1e-12 75.1 233 32.6
HanXRQChr10g0303491 Helianthus annuus HOM05D005081 ORTHO05D005506 1.1e-11 74.7 247 36.4
ATR0626G171 Amborella trichopoda HOM05D005081 ORTHO05D005506 3.1e-11 73.2 259 32.4
ECA240G1118 Erigeron canadensis HOM05D005081 ORTHO05D005506 4.0e-11 72.8 236 36.9
TPR.G25464 Trifolium pratense HOM05D005081 ORTHO05D005506 4.0e-11 72.8 180 38.9
Actinidia31880 Actinidia chinensis HOM05D005081 ORTHO05D005506 6.9e-11 72.0 226 34.5
CARHR103910 Cardamine hirsuta HOM05D005081 ORTHO05D005506 6.9e-11 72.0 240 31.7
Os02g0141500 Oryza sativa ssp. japonica HOM05D005081 ORTHO05D005506 6.9e-11 72.0 238 29.8
Ah.09g230120 Amaranthus hybridus HOM05D005081 ORTHO05D005506 4.5e-10 69.3 265 32.1
MBI13_g31561_MAGBIO Magnolia biondii HOM05D005081 ORTHO05D005506 4.5e-10 69.3 229 32.3
ECA234G2314 Erigeron canadensis HOM05D005081 ORTHO05D005506 7.6e-10 68.6 241 35.3
BcaB08g34509 Brassica carinata HOM05D005081 ORTHO05D005506 1.3e-09 67.8 239 31.8
CDE02G3184 Ceratophyllum demersum HOM05D005081 ORTHO05D005506 1.1e-08 64.7 203 31.5
VMungo0251G2709 Vigna mungo HOM05D005081 ORTHO05D005506 1.4e-08 64.3 237 32.5
Sabra18G0112300 Salix brachista HOM05D005081 ORTHO05D005506 3.2e-08 63.2 257 30.7
arahy.Tifrunner.gnm1.ann1.FV9V0P Arachis hypogaea HOM05D005081 ORTHO05D005506 1.6e-07 60.8 185 36.8
Glyma.08G028300 Glycine max HOM05D005081 ORTHO05D005506 2.1e-07 60.5 247 32.4
arahy.Tifrunner.gnm1.ann1.TAK2NC Arachis hypogaea HOM05D005081 ORTHO05D005506 1.0e-06 58.2 179 36.3
Glyma.05G221800 Glycine max HOM05D005081 ORTHO05D005506 1.0e-06 58.2 170 36.5
MD16G1241100 Malus domestica HOM05D005081 ORTHO05D005506 2.3e-06 57.0 111 41.4
Phvul.002G303500 Phaseolus vulgaris HOM05D005081 ORTHO05D005506 3.9e-06 56.2 229 33.2
BcaC01g03146 Brassica carinata HOM05D005081 ORTHO05D005506 5.1e-06 55.8 238 29.8
C03p55600 Brassica napus HOM05D005081 ORTHO05D005506 5.1e-06 55.8 238 29.8
BolC3t17837H Brassica oleracea HOM05D005081 ORTHO05D005506 5.1e-06 55.8 238 29.8
Thecc.09G002900 Theobroma cacao HOM05D005081 ORTHO05D005506 6.7e-06 55.5 255 30.2


User provided reference genes

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