Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_019779 Daucus carota HOM05D007056 ORTHO05D008278 2.6e-156 555.4 301 100.0
Nn2g15729 Nelumbo nucifera HOM05D007056 ORTHO05D008278 1.4e-93 347.1 227 74.0
Lj2A365G87 Lonicera japonica HOM05D007056 ORTHO05D008278 1.8e-93 346.7 227 73.6
Prupe.7G080200 Prunus persica HOM05D007056 ORTHO05D008278 1.8e-93 346.7 230 73.0
Dinv16370 Davidia involucrata HOM05D007056 ORTHO05D008278 2.6e-92 342.8 227 73.1
Thecc.05G174400 Theobroma cacao HOM05D007056 ORTHO05D008278 2.6e-92 342.8 246 68.7
Duzib093G0790 Durio zibethinus HOM05D007056 ORTHO05D008278 7.7e-92 341.3 227 72.7
Lalb_Chr18g0048001 Lupinus albus HOM05D007056 ORTHO05D008278 1.0e-91 340.9 240 69.6
RcHm_v2.0_Chr3g0479281 Rosa chinensis HOM05D007056 ORTHO05D008278 2.2e-91 339.7 229 72.5
Potri.016G060000 Populus trichocarpa HOM05D007056 ORTHO05D008278 2.9e-91 339.3 236 69.9
Glyma.19G149400 Glycine max HOM05D007056 ORTHO05D008278 5.0e-91 338.6 228 70.6
CSS0008084 Camellia sinensis var. sinensis HOM05D007056 ORTHO05D008278 6.5e-91 338.2 226 71.7
SGA_v2.0_scaffold69G23055 Striga asiatica HOM05D007056 ORTHO05D008278 6.5e-91 338.2 225 72.4
arahy.Tifrunner.gnm1.ann1.DK1M71 Arachis hypogaea HOM05D007056 ORTHO05D008278 8.5e-91 337.8 233 69.5
Ca_08534_v3 Cicer arietinum L. HOM05D007056 ORTHO05D008278 8.5e-91 337.8 227 70.9
MD14G1054600 Malus domestica HOM05D007056 ORTHO05D008278 8.5e-91 337.8 236 70.8
QL07p024320 Quercus lobata HOM05D007056 ORTHO05D008278 8.5e-91 337.8 226 73.0
QL07p024358 Quercus lobata HOM05D007056 ORTHO05D008278 8.5e-91 337.8 226 73.0
Actinidia38590 Actinidia chinensis HOM05D007056 ORTHO05D008278 1.5e-90 337.0 225 72.0
CANSAT64G0992 Cannabis sativa HOM05D007056 ORTHO05D008278 1.5e-90 337.0 224 71.4
Cc06_g15700 Coffea canephora HOM05D007056 ORTHO05D008278 1.5e-90 337.0 245 67.8
Lj1g0028043 Lotus japonicus HOM05D007056 ORTHO05D008278 1.5e-90 337.0 248 66.5
FAN09G4108 Fragaria x ananassa HOM05D007056 ORTHO05D008278 3.2e-90 335.9 230 72.6
arahy.Tifrunner.gnm1.ann1.LTU6F0 Arachis hypogaea HOM05D007056 ORTHO05D008278 5.5e-90 335.1 233 69.1
Cpa.g.sc85.61 Carica papaya HOM05D007056 ORTHO05D008278 5.5e-90 335.1 234 69.2
CiPaw.09G028900 Carya illinoinensis HOM05D007056 ORTHO05D008278 5.5e-90 335.1 230 71.3
Gohir.D04G089300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 7.2e-90 334.7 227 70.0
Gorai.012G099400 Gossypium raimondii HOM05D007056 ORTHO05D008278 7.2e-90 334.7 227 70.0
Cfa020149 Carpinus fangiana HOM05D007056 ORTHO05D008278 1.2e-89 334.0 230 71.3
Sabra16G0062800 Salix brachista HOM05D007056 ORTHO05D008278 2.1e-89 333.2 241 68.9
TAR369G0080 Trochodendron aralioides HOM05D007056 ORTHO05D008278 2.1e-89 333.2 227 70.9
Ciclev10012466m.g Citrus clementina HOM05D007056 ORTHO05D008278 3.6e-89 332.4 228 71.5
EL10Ac3g06891 Beta vulgaris HOM05D007056 ORTHO05D008278 6.1e-89 331.6 227 70.5
VMungo1383G1827 Vigna mungo HOM05D007056 ORTHO05D008278 8.0e-89 331.3 246 66.3
TWI77G0776 Tripterygium wilfordii HOM05D007056 ORTHO05D008278 1.8e-88 330.1 241 67.6
COL.COLO4_05956 Corchorus olitorius HOM05D007056 ORTHO05D008278 2.3e-88 329.7 225 70.7
Medtr7g093540 Medicago truncatula HOM05D007056 ORTHO05D008278 5.2e-88 328.6 226 69.0
FAN14G2508 Fragaria x ananassa HOM05D007056 ORTHO05D008278 6.7e-88 328.2 230 70.9
PGR142G3072 Punica granatum HOM05D007056 ORTHO05D008278 8.8e-88 327.8 227 69.6
Ah.04g152820 Amaranthus hybridus HOM05D007056 ORTHO05D008278 2.0e-87 326.6 226 69.9
AT3G12040 Arabidopsis thaliana HOM05D007056 ORTHO05D008278 2.0e-87 326.6 234 67.1
AUR62011999 Chenopodium quinoa HOM05D007056 ORTHO05D008278 2.0e-87 326.6 241 66.4
Eucgr.K01848 Eucalyptus grandis HOM05D007056 ORTHO05D008278 2.0e-87 326.6 236 66.9
HanXRQChr01g0010031 Helianthus annuus HOM05D007056 ORTHO05D008278 2.0e-87 326.6 227 68.7
Phvul.001G143900 Phaseolus vulgaris HOM05D007056 ORTHO05D008278 2.0e-87 326.6 232 68.1
Aqoxy2G00097 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 2.6e-87 326.2 225 69.8
MBI19_g17420_MAGBIO Magnolia biondii HOM05D007056 ORTHO05D008278 5.7e-87 325.1 227 68.7
CAN.G128.50 Capsicum annuum HOM05D007056 ORTHO05D008278 7.5e-87 324.7 225 69.8
CsaV3_3G038650 Cucumis sativus L. HOM05D007056 ORTHO05D008278 7.5e-87 324.7 241 66.0
Thhalv10021378m.g Eutrema salsugineum HOM05D007056 ORTHO05D008278 7.5e-87 324.7 233 68.2
CARHR086600 Cardamine hirsuta HOM05D007056 ORTHO05D008278 9.7e-87 324.3 242 65.3
AUR62015338 Chenopodium quinoa HOM05D007056 ORTHO05D008278 9.7e-87 324.3 242 66.5
Os02g0774500 Oryza sativa ssp. japonica HOM05D007056 ORTHO05D008278 9.7e-87 324.3 225 70.2
Solyc10g080560.2 Solanum lycopersicum HOM05D007056 ORTHO05D008278 9.7e-87 324.3 225 69.8
PGSC0003DMG400023706 Solanum tuberosum HOM05D007056 ORTHO05D008278 9.7e-87 324.3 225 69.8
Atru.chr8.1149 Acer truncatum HOM05D007056 ORTHO05D008278 1.7e-86 323.6 221 71.0
Carub.0003s1138 Capsella rubella HOM05D007056 ORTHO05D008278 1.7e-86 323.6 233 67.4
Zm00001eb256530 Zea mays HOM05D007056 ORTHO05D008278 1.7e-86 323.6 225 69.8
Nitab4.5_0001079g0030 Nicotiana tabacum HOM05D007056 ORTHO05D008278 2.8e-86 322.8 225 67.6
Sp3g10270 Schrenkiella parvula HOM05D007056 ORTHO05D008278 2.8e-86 322.8 233 67.0
THA.LOC104809936 Tarenaya hassleriana HOM05D007056 ORTHO05D008278 2.8e-86 322.8 234 66.2
ATR0598G297 Amborella trichopoda HOM05D007056 ORTHO05D008278 3.7e-86 322.4 224 68.8
A05p37300 Brassica napus HOM05D007056 ORTHO05D008278 4.8e-86 322.0 233 67.8
Sopen10g031100 Solanum pennellii HOM05D007056 ORTHO05D008278 6.3e-86 321.6 225 69.3
BcaB06g25552 Brassica carinata HOM05D007056 ORTHO05D008278 1.1e-85 320.9 229 68.6
BraA05t22526Z Brassica rapa HOM05D007056 ORTHO05D008278 1.1e-85 320.9 233 67.4
BcaC05g29295 Brassica carinata HOM05D007056 ORTHO05D008278 2.4e-85 319.7 229 67.7
AL3G23650 Arabidopsis lyrata HOM05D007056 ORTHO05D008278 4.1e-85 318.9 239 66.1
Rhsim04G0094900 Rhododendron simsii HOM05D007056 ORTHO05D008278 1.6e-84 317.0 244 65.6
Lsat_1_v5_gn_5_165300 Lactuca sativa HOM05D007056 ORTHO05D008278 2.0e-84 316.6 228 68.0
C05p55770 Brassica napus HOM05D007056 ORTHO05D008278 5.9e-84 315.1 230 67.4
BolC5t34244H Brassica oleracea HOM05D007056 ORTHO05D008278 5.9e-84 315.1 230 67.4
CDE06G2434 Ceratophyllum demersum HOM05D007056 ORTHO05D008278 5.0e-83 312.0 224 66.5
Aa31sc80G100 Aethionema arabicum HOM05D007056 ORTHO05D008278 5.5e-82 308.5 234 65.0
HPP92_004381 Vanilla planifolia HOM05D007056 ORTHO05D008278 2.1e-81 306.6 233 65.2
Peaxi162Scf00249g01221 Petunia axillaris HOM05D007056 ORTHO05D008278 2.7e-81 306.2 238 63.9
TPR.G35780 Trifolium pratense HOM05D007056 ORTHO05D008278 1.4e-80 303.9 219 66.7
SEGI_25756 Sequoiadendron giganteum HOM05D007056 ORTHO05D008278 4.0e-80 302.4 220 65.9
unitig_27.g25110 Utricularia gibba HOM05D007056 ORTHO05D008278 6.8e-80 301.6 220 64.5
SMO146G0068 Selaginella moellendorffii HOM05D007056 ORTHO05D008278 8.8e-80 301.2 227 64.8
AagrBONN_evm.TU.Sc2ySwM_344.2853 Anthoceros agrestis HOM05D007056 ORTHO05D008278 1.5e-79 300.4 225 63.6
Aqoxy3G01855 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 2.6e-79 299.7 246 61.4
Hund24814 Selenicereus undatus HOM05D007056 ORTHO05D008278 5.7e-79 298.5 239 64.4
GSVIVG01033475001 Vitis vinifera HOM05D007056 ORTHO05D008278 3.1e-77 292.7 258 59.3
ECA248G2501 Erigeron canadensis HOM05D007056 ORTHO05D008278 8.6e-75 284.6 199 67.8
Mapoly0003s0280 Marchantia polymorpha HOM05D007056 ORTHO05D008278 2.5e-74 283.1 225 59.6
Pp3c1_41490 Physcomitrium patens HOM05D007056 ORTHO05D008278 1.2e-73 280.8 225 62.7
Psat3g067120 Pisum sativum HOM05D007056 ORTHO05D008278 1.2e-73 280.8 198 67.2
PSO541G5037 Papaver somniferum HOM05D007056 ORTHO05D008278 1.0e-72 277.7 238 61.8
PSO675G9168 Papaver somniferum HOM05D007056 ORTHO05D008278 4.0e-72 275.8 240 60.8
ECA248G2516 Erigeron canadensis HOM05D007056 ORTHO05D008278 1.3e-70 270.8 195 67.2
BcaB06g25551 Brassica carinata HOM05D007056 ORTHO05D008278 2.8e-70 269.6 196 66.8
Oeu024494.3 Olea europaea HOM05D007056 ORTHO05D008278 1.1e-69 267.7 262 57.6
CBR_g48019 Chara braunii HOM05D000019 ORTHO05D000002 4.1e-69 265.8 229 59.4
vmacro22110 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 3.5e-68 262.7 306 48.0
FvH4_6g21980 Fragaria vesca HOM05D007056 ORTHO05D008278 3.2e-61 239.6 178 68.0
Sed0027134 Sechium edule HOM05D007056 ORTHO05D008278 7.3e-58 228.4 181 63.5
Gohir.A04G057300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 2.9e-54 216.5 122 80.3
Psat3g067080 Pisum sativum HOM05D007056 ORTHO05D008278 4.1e-53 212.6 133 76.7
Migut.J01851 Erythranthe guttata HOM05D007056 ORTHO05D008278 3.9e-51 206.1 153 66.0
ECA248G3402 Erigeron canadensis HOM05D000009 ORTHO05D000008 1.1e-48 198.0 152 63.8
Psat3g067040 Pisum sativum HOM05D007056 ORTHO05D008278 5.8e-47 192.2 214 50.5
Manes.08G042900 Manihot esculenta HOM05D007056 ORTHO05D008278 3.0e-43 179.9 117 74.4
ClCG10G017660 Citrullus lanatus HOM05D007056 ORTHO05D008278 3.6e-41 172.9 184 53.8
Sc13g0002370 Simmondsia chinensis HOM05D007056 ORTHO05D008278 8.1e-41 171.8 100 78.0
FAN02G0430 Fragaria x ananassa HOM05D007056 ORTHO05D008278 1.1e-40 171.4 103 79.6
MELO3C009610.2 Cucumis melo HOM05D007056 ORTHO05D008278 1.5e-39 167.5 242 43.4
Nitab4.5_0001440g0050 Nicotiana tabacum HOM05D007056 ORTHO05D008278 3.3e-34 149.8 125 57.6
Haze_20013 Corylus avellana HOM05D007056 ORTHO05D008278 1.6e-33 147.5 452 28.8
Hma1.2p1_0645F.1_g194860 Hydrangea macrophylla HOM05D007056 ORTHO05D008278 9.0e-32 141.7 73 84.9
PRCOL_00003183 Prasinoderma coloniale HOM05D007056 ORTHO05D008278 4.2e-29 132.9 236 39.0
ECA233G2032 Erigeron canadensis HOM05D007056 ORTHO05D008278 1.2e-28 131.3 73 76.7
SHI31778 Sapria himalayana HOM05D007056 ORTHO05D008278 9.6e-26 121.7 72 73.6
vmacro22990 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 1.9e-13 80.9 95 46.3


User provided reference genes

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