Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_019755 Daucus carota HOM05D004677 ORTHO05D005746 1.7e-137 492.7 241 100.0
HanXRQChr03g0073261 Helianthus annuus HOM05D004677 ORTHO05D005746 5.5e-117 424.5 241 83.0
Dinv08753 Davidia involucrata HOM05D004677 ORTHO05D005746 1.2e-116 423.3 240 85.0
Cc05_g03990 Coffea canephora HOM05D004677 ORTHO05D005746 4.0e-115 418.3 239 82.8
Actinidia09726 Actinidia chinensis HOM05D004677 ORTHO05D005746 6.8e-115 417.5 239 83.7
Cfa014357 Carpinus fangiana HOM05D004677 ORTHO05D005746 1.5e-114 416.4 241 81.7
Hund06461 Selenicereus undatus HOM05D004677 ORTHO05D005746 2.0e-114 416.0 238 81.9
Ciclev10016206m.g Citrus clementina HOM05D004677 ORTHO05D005746 2.6e-114 415.6 240 82.1
QL08p032142 Quercus lobata HOM05D004677 ORTHO05D005746 2.6e-114 415.6 239 82.4
Rhsim06G0164500 Rhododendron simsii HOM05D004677 ORTHO05D005746 2.6e-114 415.6 236 83.9
Lalb_Chr01g0023241 Lupinus albus HOM05D004677 ORTHO05D005746 3.4e-114 415.2 240 81.2
vmacro12188 Vaccinium macrocarpon HOM05D004677 ORTHO05D005746 3.7e-113 411.8 239 82.8
Glyma.06G307800 Glycine max HOM05D004677 ORTHO05D005746 4.9e-113 411.4 239 81.6
Oeu027244.1 Olea europaea HOM05D004677 ORTHO05D005746 4.9e-113 411.4 238 79.8
Potri.014G155200 Populus trichocarpa HOM05D004677 ORTHO05D005746 4.9e-113 411.4 240 81.2
Duzib133G0523 Durio zibethinus HOM05D004677 ORTHO05D005746 6.3e-113 411.0 241 81.3
Glyma.12G192200 Glycine max HOM05D004677 ORTHO05D005746 8.3e-113 410.6 239 80.8
FvH4_6g42850 Fragaria vesca HOM05D004677 ORTHO05D005746 1.4e-112 409.8 240 81.2
FAN02G0422 Fragaria x ananassa HOM05D004677 ORTHO05D005746 1.4e-112 409.8 240 81.2
FAN05G4912 Fragaria x ananassa HOM05D004677 ORTHO05D005746 1.4e-112 409.8 240 81.2
Lj3g0003247 Lotus japonicus HOM05D004677 ORTHO05D005746 1.4e-112 409.8 241 79.7
VMungo1080G1602 Vigna mungo HOM05D004677 ORTHO05D005746 1.4e-112 409.8 240 80.4
Migut.M00416 Erythranthe guttata HOM05D004677 ORTHO05D005746 1.8e-112 409.5 238 80.7
Gohir.D07G176800 Gossypium hirsutum HOM05D004677 ORTHO05D005746 1.8e-112 409.5 239 82.0
Gorai.001G197600 Gossypium raimondii HOM05D004677 ORTHO05D005746 1.8e-112 409.5 239 82.0
CANSAT64G2258 Cannabis sativa HOM05D004677 ORTHO05D005746 2.4e-112 409.1 238 81.1
COL.COLO4_20015 Corchorus olitorius HOM05D004677 ORTHO05D005746 3.1e-112 408.7 241 81.3
Nitab4.5_0000006g0310 Nicotiana tabacum HOM05D004677 ORTHO05D005746 3.1e-112 408.7 240 80.8
CiPaw.03G158200 Carya illinoinensis HOM05D004677 ORTHO05D005746 4.1e-112 408.3 241 81.3
CSS0008737 Camellia sinensis var. sinensis HOM05D004677 ORTHO05D005746 7.0e-112 407.5 239 82.0
Eucgr.K00785 Eucalyptus grandis HOM05D004677 ORTHO05D005746 7.0e-112 407.5 236 81.4
Lj1A770G43 Lonicera japonica HOM05D004677 ORTHO05D005746 7.0e-112 407.5 225 86.7
arahy.Tifrunner.gnm1.ann1.34K6GT Arachis hypogaea HOM05D004677 ORTHO05D005746 9.2e-112 407.1 240 78.8
FAN14G2731 Fragaria x ananassa HOM05D004677 ORTHO05D005746 9.2e-112 407.1 240 80.4
Manes.13G068200 Manihot esculenta HOM05D004677 ORTHO05D005746 1.2e-111 406.8 240 80.0
TAR629G2143 Trochodendron aralioides HOM05D004677 ORTHO05D005746 1.6e-111 406.4 238 80.3
Phvul.005G116100 Phaseolus vulgaris HOM05D004677 ORTHO05D005746 2.0e-111 406.0 239 80.8
Atru.chr6.3221 Acer truncatum HOM05D004677 ORTHO05D005746 2.7e-111 405.6 240 80.0
Hma1.2p1_0895F.1_g233790 Hydrangea macrophylla HOM05D004677 ORTHO05D005746 2.7e-111 405.6 240 80.8
Sed0004392 Sechium edule HOM05D004677 ORTHO05D005746 2.7e-111 405.6 239 79.5
Prupe.3G214600 Prunus persica HOM05D004677 ORTHO05D005746 3.5e-111 405.2 240 79.2
arahy.Tifrunner.gnm1.ann1.5LK61T Arachis hypogaea HOM05D004677 ORTHO05D005746 4.5e-111 404.8 236 80.5
Nitab4.5_0004702g0010 Nicotiana tabacum HOM05D004677 ORTHO05D005746 4.5e-111 404.8 240 80.0
PSO675G6993 Papaver somniferum HOM05D004677 ORTHO05D005746 5.9e-111 404.4 234 79.9
PGR142G1137 Punica granatum HOM05D004677 ORTHO05D005746 1.0e-110 403.7 237 80.2
MSTRG.14847 Avicennia marina HOM05D004677 ORTHO05D005746 1.3e-110 403.3 240 77.9
TWI18G0105 Tripterygium wilfordii HOM05D004677 ORTHO05D005746 1.3e-110 403.3 240 79.6
Thecc.01G176700 Theobroma cacao HOM05D004677 ORTHO05D005746 1.7e-110 402.9 241 80.5
Ca_19496_v3 Cicer arietinum L. HOM05D004677 ORTHO05D005746 2.3e-110 402.5 240 79.6
TWI36G1343 Tripterygium wilfordii HOM05D004677 ORTHO05D005746 2.9e-110 402.1 240 78.8
Aqoxy1G03069 Aquilegia oxysepala HOM05D004677 ORTHO05D005746 6.6e-110 401.0 237 79.3
Sopen05g026690 Solanum pennellii HOM05D004677 ORTHO05D005746 8.6e-110 400.6 240 79.2
VMungo1127G1216 Vigna mungo HOM05D004677 ORTHO05D005746 1.1e-109 400.2 240 80.0
TPR.G4610 Trifolium pratense HOM05D004677 ORTHO05D005746 1.5e-109 399.8 240 79.2
Lalb_Chr01g0005771 Lupinus albus HOM05D004677 ORTHO05D005746 1.9e-109 399.4 240 78.8
MBI10_g43118_MAGBIO Magnolia biondii HOM05D004677 ORTHO05D005746 1.9e-109 399.4 239 77.8
Sc12g0002230 Simmondsia chinensis HOM05D004677 ORTHO05D005746 3.3e-109 398.7 239 77.0
RcHm_v2.0_Chr2g0158791 Rosa chinensis HOM05D004677 ORTHO05D005746 7.3e-109 397.5 240 77.9
Medtr4g049830 Medicago truncatula HOM05D004677 ORTHO05D005746 9.5e-109 397.1 241 78.0
CsaV3_7G003450 Cucumis sativus L. HOM05D004677 ORTHO05D005746 1.2e-108 396.7 240 77.1
HanXRQChr15g0490311 Helianthus annuus HOM05D004677 ORTHO05D005746 1.6e-108 396.4 241 78.0
Psat7g201040 Pisum sativum HOM05D004677 ORTHO05D005746 2.1e-108 396.0 240 78.8
Hund00385 Selenicereus undatus HOM05D004677 ORTHO05D005746 2.8e-108 395.6 239 77.4
Phvul.011G101800 Phaseolus vulgaris HOM05D004677 ORTHO05D005746 3.6e-108 395.2 241 78.4
BolC4t27678H Brassica oleracea HOM05D004677 ORTHO05D005746 8.0e-108 394.0 239 77.4
BraA04t18010Z Brassica rapa HOM05D004677 ORTHO05D005746 8.0e-108 394.0 239 77.4
Peaxi162Scf00462g00089 Petunia axillaris HOM05D004677 ORTHO05D005746 8.0e-108 394.0 239 78.2
Aa31LG5G4780 Aethionema arabicum HOM05D004677 ORTHO05D005746 1.4e-107 393.3 239 77.0
Haze_12810 Corylus avellana HOM05D004677 ORTHO05D005746 1.4e-107 393.3 224 83.0
BcaC02g07915 Brassica carinata HOM05D004677 ORTHO05D005746 1.8e-107 392.9 238 77.7
C04p62010 Brassica napus HOM05D004677 ORTHO05D005746 1.8e-107 392.9 238 77.7
Os01g0531500 Oryza sativa ssp. japonica HOM05D004677 ORTHO05D005746 1.8e-107 392.9 242 76.4
MELO3C018827.2 Cucumis melo HOM05D004677 ORTHO05D005746 2.3e-107 392.5 240 76.2
Lsat_1_v5_gn_9_106900 Lactuca sativa HOM05D004677 ORTHO05D005746 3.0e-107 392.1 242 77.7
A04p24990 Brassica napus HOM05D004677 ORTHO05D005746 4.0e-107 391.7 239 77.0
AUR62012879 Chenopodium quinoa HOM05D004677 ORTHO05D005746 5.2e-107 391.3 239 75.3
AUR62027103 Chenopodium quinoa HOM05D004677 ORTHO05D005746 5.2e-107 391.3 239 75.3
AT2G32520 Arabidopsis thaliana HOM05D004677 ORTHO05D005746 6.8e-107 391.0 239 76.2
Thhalv10017055m.g Eutrema salsugineum HOM05D004677 ORTHO05D005746 6.8e-107 391.0 238 76.9
ClCG02G002040 Citrullus lanatus HOM05D004677 ORTHO05D005746 8.9e-107 390.6 239 76.2
THA.LOC104800998 Tarenaya hassleriana HOM05D004677 ORTHO05D005746 8.9e-107 390.6 239 77.4
AL4G27910 Arabidopsis lyrata HOM05D004677 ORTHO05D005746 1.2e-106 390.2 239 75.7
BcaB06g28600 Brassica carinata HOM05D004677 ORTHO05D005746 2.0e-106 389.4 238 76.9
Zm00001eb162930 Zea mays HOM05D004677 ORTHO05D005746 2.6e-106 389.0 239 74.5
FAN09G3259 Fragaria x ananassa HOM05D004677 ORTHO05D005746 7.5e-106 387.5 240 77.9
CARHR126350 Cardamine hirsuta HOM05D004677 ORTHO05D005746 1.3e-105 386.7 239 74.9
ATR0585G016 Amborella trichopoda HOM05D004677 ORTHO05D005746 2.9e-105 385.6 238 75.6
Sp4g14870 Schrenkiella parvula HOM05D004677 ORTHO05D005746 6.4e-105 384.4 238 76.5
Lj3g0012150 Lotus japonicus HOM05D004677 ORTHO05D005746 1.8e-104 382.9 240 73.8
CDE02G1429 Ceratophyllum demersum HOM05D004677 ORTHO05D005746 2.4e-104 382.5 240 74.6
Carub.0004s1386 Capsella rubella HOM05D004677 ORTHO05D005746 4.1e-104 381.7 239 74.1
EL10Ac9g22065 Beta vulgaris HOM05D004677 ORTHO05D005746 9.2e-104 380.6 239 73.6
MBI10_g41369_MAGBIO Magnolia biondii HOM05D004677 ORTHO05D005746 1.6e-103 379.8 239 74.9
BcaB02g10464 Brassica carinata HOM05D004677 ORTHO05D005746 2.0e-103 379.4 239 75.3
BcaC02g11313 Brassica carinata HOM05D004677 ORTHO05D005746 3.5e-103 378.6 239 74.5
C04p17150 Brassica napus HOM05D004677 ORTHO05D005746 3.5e-103 378.6 239 74.5
BolC4t23265H Brassica oleracea HOM05D004677 ORTHO05D005746 3.5e-103 378.6 239 74.5
BraA05t20266Z Brassica rapa HOM05D004677 ORTHO05D005746 4.6e-103 378.3 238 74.8
Sed0023389 Sechium edule HOM05D004677 ORTHO05D005746 4.6e-103 378.3 237 75.5
A05p13260 Brassica napus HOM05D004677 ORTHO05D005746 1.0e-102 377.1 238 74.8
SEGI_04984 Sequoiadendron giganteum HOM05D004677 ORTHO05D005746 1.1e-101 373.6 240 73.3
HPP92_020158 Vanilla planifolia HOM05D004677 ORTHO05D005746 9.5e-101 370.5 235 74.0
Gohir.A07G174750 Gossypium hirsutum HOM05D004677 ORTHO05D005746 1.4e-99 366.7 239 74.1
Cpa.g.sc572.2 Carica papaya HOM05D004677 ORTHO05D005746 8.9e-99 364.0 257 70.8
SGA_v2.0_scaffold34G13862 Striga asiatica HOM05D004677 ORTHO05D005746 1.3e-97 360.1 240 71.7
Sabra14G0117500 Salix brachista HOM05D004677 ORTHO05D005746 1.7e-97 359.8 363 53.7
MBI10_g41368_MAGBIO Magnolia biondii HOM05D004677 ORTHO05D005746 1.1e-96 357.1 222 75.2
ECA240G0706 Erigeron canadensis HOM05D004677 ORTHO05D005746 1.2e-95 353.6 222 74.3
SGA_v2.0_scaffold445G51724 Striga asiatica HOM05D004677 ORTHO05D005746 1.1e-93 347.1 240 69.6
SGA_v2.0_scaffold186G40184 Striga asiatica HOM05D004677 ORTHO05D005746 4.3e-93 345.1 240 68.8
Lsat_1_v5_gn_9_106880 Lactuca sativa HOM05D004677 ORTHO05D005746 7.3e-93 344.4 239 69.9
MBI10_g35587_MAGBIO Magnolia biondii HOM05D004677 ORTHO05D005746 9.8e-90 334.0 241 68.0
Mapoly0043s0053 Marchantia polymorpha HOM05D004677 ORTHO05D005746 2.4e-88 329.3 243 66.3
SMO351G0384 Selaginella moellendorffii HOM05D004677 ORTHO05D005746 9.2e-88 327.4 241 64.3
Pp3c16_5740 Physcomitrium patens HOM05D004677 ORTHO05D005746 3.9e-86 322.0 238 63.4
Lj3g0025926 Lotus japonicus HOM05D004677 ORTHO05D005746 1.9e-85 319.7 191 80.1
CBR_g23740 Chara braunii HOM05D004677 ORTHO05D005746 1.1e-80 303.9 235 61.7
Solyc05g043430.4 Solanum lycopersicum HOM05D004677 ORTHO05D005746 4.6e-79 298.5 171 83.0
Lj5g0020236 Lotus japonicus HOM05D004677 ORTHO05D005746 9.6e-77 290.8 247 58.7
TAR627G1178 Trochodendron aralioides HOM05D004677 ORTHO05D005746 1.2e-76 290.4 190 73.2
Oeu036746.3 Olea europaea HOM05D004677 ORTHO05D005746 2.1e-76 289.7 238 60.5
MD09G1072400 Malus domestica HOM05D004677 ORTHO05D005746 4.0e-75 285.4 226 63.3
SHI10364 Sapria himalayana HOM05D004677 ORTHO05D005746 3.6e-68 262.3 169 72.2
Lj2g0012873 Lotus japonicus HOM05D004677 ORTHO05D005746 5.3e-67 258.5 241 53.5
HPP92_020157 Vanilla planifolia HOM05D004677 ORTHO05D005746 2.0e-66 256.5 221 57.5
Lj2g0026590 Lotus japonicus HOM05D004677 ORTHO05D005746 2.3e-62 243.0 257 50.2
AagrBONN_evm.TU.Sc2ySwM_117.68 Anthoceros agrestis HOM05D004677 ORTHO05D005746 2.8e-60 236.1 171 64.9
unitig_0.g733 Utricularia gibba HOM05D004677 ORTHO05D005746 4.0e-59 232.3 135 82.2
Nn1g03456 Nelumbo nucifera HOM05D004677 ORTHO05D005746 1.1e-56 224.2 125 84.0
Lj3g0001260 Lotus japonicus HOM05D004677 ORTHO05D005746 3.9e-54 215.7 239 48.5
MCO13G274 Micromonas commoda HOM05D004677 ORTHO05D005746 7.6e-50 201.4 229 44.1
MD17G1099100 Malus domestica HOM05D004677 ORTHO05D005746 2.9e-49 199.5 127 76.4
CDE08G0164 Ceratophyllum demersum HOM05D004677 ORTHO05D005746 3.9e-46 189.1 106 80.2
PRCOL_00005478 Prasinoderma coloniale HOM05D004677 ORTHO05D005746 3.3e-45 186.0 219 44.7
Cre06.g294000 Chlamydomonas reinhardtii HOM05D004677 ORTHO05D005746 4.3e-45 185.7 220 43.6
CDE08G1094 Ceratophyllum demersum HOM05D004677 ORTHO05D005746 4.8e-44 182.2 126 69.0
arahy.Tifrunner.gnm1.ann1.4D0QE2 Arachis hypogaea HOM05D004677 ORTHO05D005746 1.5e-34 150.6 106 67.9
SGA_v2.0_scaffold228G43250 Striga asiatica HOM05D004677 ORTHO05D005746 8.5e-33 144.8 87 74.7
Nn1g04350 Nelumbo nucifera HOM05D004677 ORTHO05D005746 2.5e-32 143.3 84 81.0
DCAR_013148 Daucus carota HOM05D004677 ORTHO05D005746 2.3e-30 136.7 77 84.4
arahy.Tifrunner.gnm1.ann1.IJK42W Arachis hypogaea HOM05D004677 ORTHO05D005746 7.4e-29 131.7 103 60.2
arahy.Tifrunner.gnm1.ann1.65RE86 Arachis hypogaea HOM05D004677 ORTHO05D005746 3.7e-28 129.4 72 79.2
Cre06.g258600 Chlamydomonas reinhardtii HOM05D004677 ORTHO05D005746 1.1e-27 127.9 254 33.9
MD17G1099200 Malus domestica HOM05D004677 ORTHO05D005746 3.9e-22 109.4 63 71.4
Nn3g18971 Nelumbo nucifera HOM05D004677 ORTHO05D005746 9.7e-21 104.8 64 70.3
AagrBONN_evm.TU.Sc2ySwM_117.4165 Anthoceros agrestis HOM05D004677 ORTHO05D005746 1.6e-15 87.4 86 53.5
arahy.Tifrunner.gnm1.ann1.B7RHXH Arachis hypogaea HOM05D004677 ORTHO05D005746 4.8e-12 75.9 89 53.9
FAN09G2974 Fragaria x ananassa HOM05D004677 ORTHO05D005746 1.4e-11 74.3 39 76.9
Aqoxy5G02648 Aquilegia oxysepala HOM05D003774 ORTHO05D009174 1.2e-10 71.2 234 27.8
Gohir.D13G122800 Gossypium hirsutum HOM05D003774 ORTHO05D009174 1.5e-08 64.3 241 26.1
Gorai.013G137800 Gossypium raimondii HOM05D003774 ORTHO05D009174 1.5e-08 64.3 241 26.1
Potri.019G079000 Populus trichocarpa HOM05D003774 ORTHO05D009174 1.5e-08 64.3 219 27.4
GSVIVG01026084001 Vitis vinifera HOM05D003774 ORTHO05D009174 1.5e-08 64.3 247 27.5
Atru.chr13.2367 Acer truncatum HOM05D003774 ORTHO05D009174 1.9e-08 63.9 240 26.2
EL10Ac1g00136 Beta vulgaris HOM05D003774 ORTHO05D009174 3.2e-08 63.2 240 25.8
COL.COLO4_24651 Corchorus olitorius HOM05D003774 ORTHO05D009174 3.2e-08 63.2 241 24.9
VMungo1080G0925 Vigna mungo HOM05D003774 ORTHO05D009174 3.2e-08 63.2 215 27.9
Sabra13G0091200 Salix brachista HOM05D003774 ORTHO05D009174 5.5e-08 62.4 244 29.1
Gohir.A13G119000 Gossypium hirsutum HOM05D003774 ORTHO05D009174 7.2e-08 62.0 244 25.8
Thecc.08G192500 Theobroma cacao HOM05D003774 ORTHO05D009174 7.2e-08 62.0 241 25.7
ATR0320G028 Amborella trichopoda HOM05D003774 ORTHO05D009174 1.2e-07 61.2 206 28.6
Nitab4.5_0001463g0050 Nicotiana tabacum HOM05D003774 ORTHO05D009174 1.2e-07 61.2 222 26.6
TWI59G1355 Tripterygium wilfordii HOM05D003774 ORTHO05D009174 2.7e-07 60.1 196 30.6
arahy.Tifrunner.gnm1.ann1.G1NRGV Arachis hypogaea HOM05D004677 ORTHO05D005746 3.6e-07 59.7 63 42.9
MD08G1217800 Malus domestica HOM05D003774 ORTHO05D009174 4.7e-07 59.3 233 25.8
Rhsim11G0052900 Rhododendron simsii HOM05D003774 ORTHO05D009174 4.7e-07 59.3 225 28.9
CANSAT25G3020 Cannabis sativa HOM05D003774 ORTHO05D009174 8.0e-07 58.5 230 27.8
arahy.Tifrunner.gnm1.ann1.LRB7BH Arachis hypogaea HOM05D004677 ORTHO05D005746 1.4e-06 57.8 61 44.3
Pp3c3_11190 Physcomitrium patens HOM05D005182 ORTHO05D006631 1.8e-06 57.4 174 28.7
TAR624G0812 Trochodendron aralioides HOM05D003774 ORTHO05D009174 1.8e-06 57.4 193 27.5
arahy.Tifrunner.gnm1.ann1.WARH89 Arachis hypogaea HOM05D004677 ORTHO05D005746 2.3e-06 57.0 28 89.3
HPP92_011935 Vanilla planifolia HOM05D003774 ORTHO05D009174 2.3e-06 57.0 245 25.3
CiPaw.07G235700 Carya illinoinensis HOM05D003774 ORTHO05D009174 5.2e-06 55.8 191 28.3
AUR62023544 Chenopodium quinoa HOM05D003774 ORTHO05D009174 5.2e-06 55.8 228 25.4
Ciclev10030258m.g Citrus clementina HOM05D004677 ORTHO05D005746 5.2e-06 55.8 37 70.3
HPP92_011955 Vanilla planifolia HOM05D003774 ORTHO05D009174 5.2e-06 55.8 245 25.3
Ciclev10001943m.g Citrus clementina HOM05D003774 ORTHO05D009174 6.8e-06 55.5 234 25.2
HanXRQChr02g0036581 Helianthus annuus HOM05D003774 ORTHO05D009174 6.8e-06 55.5 244 27.9
DCAR_003529 Daucus carota HOM05D003774 ORTHO05D009174 8.8e-06 55.1 223 25.1


User provided reference genes

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