Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_019753 Daucus carota HOM05D003691 ORTHO05D004288 0.0e+00 1277.7 654 100.0
DCAR_021155 Daucus carota HOM05D003691 ORTHO05D004288 1.3e-269 932.9 656 73.0
Dinv08745 Davidia involucrata HOM05D003691 ORTHO05D004288 6.3e-240 834.3 660 66.1
Hma1.2p1_0895F.1_g233770 Hydrangea macrophylla HOM05D003691 ORTHO05D004288 3.5e-238 828.6 659 64.8
Dinv39731 Davidia involucrata HOM05D003691 ORTHO05D004288 7.7e-238 827.4 661 65.2
Haze_12800 Corylus avellana HOM05D003691 ORTHO05D004288 2.9e-237 825.5 665 64.5
GSVIVG01030475001 Vitis vinifera HOM05D003691 ORTHO05D004288 3.8e-237 825.1 661 64.4
CiPaw.03G157800 Carya illinoinensis HOM05D003691 ORTHO05D004288 1.5e-233 813.1 663 64.6
vmacro09345 Vaccinium macrocarpon HOM05D003691 ORTHO05D004288 4.1e-231 805.1 679 64.7
QL08p031532 Quercus lobata HOM05D003691 ORTHO05D004288 1.0e-229 800.4 653 63.7
TWI75G0495 Tripterygium wilfordii HOM05D003691 ORTHO05D004288 1.3e-229 800.0 660 63.9
Migut.M00432 Erythranthe guttata HOM05D003691 ORTHO05D004288 1.6e-227 793.1 662 63.0
Atru.chr6.3228 Acer truncatum HOM05D003691 ORTHO05D004288 8.0e-227 790.8 665 62.7
Rhsim04G0052200 Rhododendron simsii HOM05D003691 ORTHO05D004288 1.4e-226 790.0 675 65.2
Manes.04G099700 Manihot esculenta HOM05D003691 ORTHO05D004288 6.8e-226 787.7 660 62.3
MSTRG.14857 Avicennia marina HOM05D003691 ORTHO05D004288 1.7e-224 783.1 658 62.2
Potri.014G155900 Populus trichocarpa HOM05D003691 ORTHO05D004288 8.3e-224 780.8 659 62.4
MD09G1071300 Malus domestica HOM05D003691 ORTHO05D004288 2.4e-223 779.2 659 61.9
Sabra14G0117900 Salix brachista HOM05D003691 ORTHO05D004288 5.9e-222 774.6 659 62.2
Prupe.3G213700 Prunus persica HOM05D003691 ORTHO05D004288 1.0e-221 773.9 660 61.1
TWI36G1355 Tripterygium wilfordii HOM05D003691 ORTHO05D004288 1.3e-221 773.5 663 61.4
Lj8A127T48 Lonicera japonica HOM05D003691 ORTHO05D004288 2.2e-221 772.7 578 68.3
Oeu027232.1 Olea europaea HOM05D003691 ORTHO05D004288 8.5e-221 770.8 650 62.3
SGA_v2.0_scaffold70G23393 Striga asiatica HOM05D003691 ORTHO05D004288 1.5e-220 770.0 660 62.4
Duzib138G0684 Durio zibethinus HOM05D003691 ORTHO05D004288 2.5e-220 769.2 659 62.4
Thecc.01G178100 Theobroma cacao HOM05D003691 ORTHO05D004288 2.1e-219 766.1 662 62.1
Sed0022442 Sechium edule HOM05D003691 ORTHO05D004288 2.8e-219 765.8 664 60.8
Solyc07g049680.4 Solanum lycopersicum HOM05D003691 ORTHO05D004288 1.0e-218 763.8 651 61.8
CAN.G290.10 Capsicum annuum HOM05D003691 ORTHO05D004288 8.8e-218 760.8 651 64.7
Sopen07g025100 Solanum pennellii HOM05D003691 ORTHO05D004288 1.5e-217 760.0 651 61.8
Ciclev10014542m.g Citrus clementina HOM05D003691 ORTHO05D004288 3.4e-217 758.8 663 60.2
CsaV3_2G034670 Cucumis sativus L. HOM05D003691 ORTHO05D004288 7.5e-217 757.7 659 61.0
Gohir.D07G088400 Gossypium hirsutum HOM05D003691 ORTHO05D004288 1.3e-216 756.9 657 61.5
ClCG02G009060 Citrullus lanatus HOM05D003691 ORTHO05D004288 2.8e-216 755.7 664 60.7
TAR624G0007 Trochodendron aralioides HOM05D003691 ORTHO05D004288 3.7e-216 755.4 665 61.4
Duzib211G0477 Durio zibethinus HOM05D003691 ORTHO05D004288 8.3e-216 754.2 661 61.6
SalBow7G1078 Salvia bowleyana HOM05D003691 ORTHO05D004288 1.4e-215 753.4 683 61.1
Gorai.001G094600 Gossypium raimondii HOM05D003691 ORTHO05D004288 1.8e-215 753.1 667 60.4
CANSAT64G0165 Cannabis sativa HOM05D003691 ORTHO05D004288 2.4e-215 752.7 662 61.2
Gohir.A07G081900 Gossypium hirsutum HOM05D003691 ORTHO05D004288 3.1e-215 752.3 667 60.4
AL4G27990 Arabidopsis lyrata HOM05D003691 ORTHO05D004288 1.0e-213 747.3 673 59.4
PGSC0003DMG400001077 Solanum tuberosum HOM05D003691 ORTHO05D004288 1.3e-213 746.9 651 61.3
MELO3C019300.2 Cucumis melo HOM05D003691 ORTHO05D004288 1.7e-213 746.5 659 60.7
Nitab4.5_0015742g0010 Nicotiana tabacum HOM05D003691 ORTHO05D004288 2.3e-213 746.1 654 61.0
ECA236G1051 Erigeron canadensis HOM05D003691 ORTHO05D004288 5.0e-213 745.0 653 61.7
PGR042G1566 Punica granatum HOM05D003691 ORTHO05D004288 1.1e-212 743.8 663 60.5
Nitab4.5_0000130g0240 Nicotiana tabacum HOM05D003691 ORTHO05D004288 3.3e-212 742.3 659 61.2
Cc05_g03670 Coffea canephora HOM05D003691 ORTHO05D004288 5.6e-212 741.5 705 58.2
Thhalv10016359m.g Eutrema salsugineum HOM05D003691 ORTHO05D004288 5.6e-212 741.5 672 60.1
RcHm_v2.0_Chr2g0158621 Rosa chinensis HOM05D003691 ORTHO05D004288 1.6e-211 740.0 666 59.3
AT2G32590 Arabidopsis thaliana HOM05D003691 ORTHO05D004288 2.8e-211 739.2 675 59.1
Carub.0004s1392 Capsella rubella HOM05D003691 ORTHO05D004288 3.6e-211 738.8 672 59.4
FAN14G5114 Fragaria x ananassa HOM05D003691 ORTHO05D004288 1.4e-210 736.9 668 59.3
Eucgr.A01107 Eucalyptus grandis HOM05D003691 ORTHO05D004288 1.8e-210 736.5 664 62.7
A05p13290 Brassica napus HOM05D003691 ORTHO05D004288 3.0e-210 735.7 674 59.2
Sp4g14920 Schrenkiella parvula HOM05D003691 ORTHO05D004288 3.0e-210 735.7 671 59.2
Nn1g03443 Nelumbo nucifera HOM05D003691 ORTHO05D004288 4.0e-210 735.3 665 62.4
FAN05G1959 Fragaria x ananassa HOM05D003691 ORTHO05D004288 8.9e-210 734.2 668 58.8
ECA240G1119 Erigeron canadensis HOM05D003691 ORTHO05D004288 2.0e-209 733.0 662 58.6
A04p25040 Brassica napus HOM05D003691 ORTHO05D004288 2.6e-209 732.6 672 59.4
CARHR126440 Cardamine hirsuta HOM05D003691 ORTHO05D004288 2.6e-209 732.6 675 57.6
Lalb_Chr03g0028581 Lupinus albus HOM05D003691 ORTHO05D004288 3.4e-209 732.3 669 59.2
C04p17080 Brassica napus HOM05D003691 ORTHO05D004288 4.4e-209 731.9 672 58.9
FAN09G0430 Fragaria x ananassa HOM05D003691 ORTHO05D004288 5.7e-209 731.5 668 58.7
BraA04t18015Z Brassica rapa HOM05D003691 ORTHO05D004288 6.4e-208 728.0 673 58.7
BraA05t20270Z Brassica rapa HOM05D003691 ORTHO05D004288 6.4e-208 728.0 675 59.0
Lsat_1_v5_gn_7_93200 Lactuca sativa HOM05D003691 ORTHO05D004288 1.1e-207 727.2 667 60.7
THA.LOC104816038 Tarenaya hassleriana HOM05D003691 ORTHO05D004288 1.4e-207 726.9 670 58.8
FvH4_6g42730 Fragaria vesca HOM05D003691 ORTHO05D004288 1.8e-207 726.5 678 58.3
MBI07_g01730_MAGBIO Magnolia biondii HOM05D003691 ORTHO05D004288 3.2e-207 725.7 643 59.7
Glyma.12G096700 Glycine max HOM05D003691 ORTHO05D004288 1.2e-206 723.8 663 59.1
Medtr4g050060 Medicago truncatula HOM05D003691 ORTHO05D004288 1.2e-206 723.8 667 59.5
BolC4t23260H Brassica oleracea HOM05D003691 ORTHO05D004288 4.6e-206 721.8 687 57.6
TAR626G1388 Trochodendron aralioides HOM05D003691 ORTHO05D004288 1.0e-205 720.7 594 63.5
HanXRQChr04g0126971 Helianthus annuus HOM05D003691 ORTHO05D004288 2.3e-205 719.5 666 60.1
Glyma.06G308100 Glycine max HOM05D003691 ORTHO05D004288 9.5e-204 714.1 663 59.0
arahy.Tifrunner.gnm1.ann1.4D79G7 Arachis hypogaea HOM05D003691 ORTHO05D004288 2.8e-203 712.6 675 59.1
arahy.Tifrunner.gnm1.ann1.AS5DTW Arachis hypogaea HOM05D003691 ORTHO05D004288 2.8e-203 712.6 675 59.0
PSO210G5093 Papaver somniferum HOM05D003691 ORTHO05D004288 3.1e-202 709.1 660 58.3
Phvul.011G101300 Phaseolus vulgaris HOM05D003691 ORTHO05D004288 6.8e-202 708.0 663 58.1
Aqoxy1G03453 Aquilegia oxysepala HOM05D003691 ORTHO05D004288 8.9e-202 707.6 669 57.2
FAN02G0990 Fragaria x ananassa HOM05D003691 ORTHO05D004288 1.2e-201 707.2 668 57.6
TPR.G4630 Trifolium pratense HOM05D003691 ORTHO05D004288 5.8e-201 704.9 673 58.1
QL08p006881 Quercus lobata HOM05D003691 ORTHO05D004288 8.3e-200 701.0 661 61.0
Aa31LG5G4740 Aethionema arabicum HOM05D003691 ORTHO05D004288 1.9e-199 699.9 672 56.0
Lj3g0007999 Lotus japonicus HOM05D003691 ORTHO05D004288 4.1e-199 698.7 667 57.1
VMungo1127G0496 Vigna mungo HOM05D003691 ORTHO05D004288 4.3e-196 688.7 663 56.9
Sc12g0002210 Simmondsia chinensis HOM05D003691 ORTHO05D004288 9.5e-196 687.6 675 57.2
Psat7g203760 Pisum sativum HOM05D003691 ORTHO05D004288 2.8e-195 686.0 667 57.6
Cfa020301 Carpinus fangiana HOM05D003691 ORTHO05D004288 1.4e-194 683.7 649 60.1
Lsat_1_v5_gn_9_106740 Lactuca sativa HOM05D003691 ORTHO05D004288 8.9e-194 681.0 644 58.4
THA.LOC104826143 Tarenaya hassleriana HOM05D003691 ORTHO05D004288 4.4e-193 678.7 683 57.7
Phvul.005G116900 Phaseolus vulgaris HOM05D003691 ORTHO05D004288 1.0e-189 667.5 648 56.2
Ca_19493_v3 Cicer arietinum L. HOM05D003691 ORTHO05D004288 1.6e-187 660.2 673 56.2
Atru.chr2.3500 Acer truncatum HOM05D003691 ORTHO05D004288 8.1e-187 657.9 669 54.7
Peaxi162Scf00007g00129 Petunia axillaris HOM05D003691 ORTHO05D004288 2.3e-186 656.4 650 56.6
Glyma.12G191300 Glycine max HOM05D003691 ORTHO05D004288 8.9e-186 654.4 669 53.1
Thecc.07G031000 Theobroma cacao HOM05D003691 ORTHO05D004288 4.4e-185 652.1 664 58.4
Prupe.4G220400 Prunus persica HOM05D003691 ORTHO05D004288 3.8e-184 649.0 666 55.1
EL10Ac4g07751 Beta vulgaris HOM05D003691 ORTHO05D004288 4.6e-182 642.1 683 54.5
Hund02023 Selenicereus undatus HOM05D003691 ORTHO05D004288 1.3e-181 640.6 716 52.8
Medtr2g087880 Medicago truncatula HOM05D003691 ORTHO05D004288 1.7e-181 640.2 662 53.0
VMungo1080G0849 Vigna mungo HOM05D003691 ORTHO05D004288 1.5e-180 637.1 664 53.2
Psat5g261240 Pisum sativum HOM05D003691 ORTHO05D004288 5.6e-180 635.2 659 53.1
ATR0317G123 Amborella trichopoda HOM05D003691 ORTHO05D004288 9.0e-178 627.9 645 54.7
TPR.G4243 Trifolium pratense HOM05D003691 ORTHO05D004288 3.4e-177 625.9 680 52.5
AUR62015833 Chenopodium quinoa HOM05D003691 ORTHO05D004288 8.4e-176 621.3 706 51.4
Ca_01616_v3 Cicer arietinum L. HOM05D003691 ORTHO05D004288 1.9e-175 620.2 691 50.9
LjContig00274_ERROPOS1100000g0006521 Lotus japonicus HOM05D003691 ORTHO05D004288 6.0e-174 615.1 595 56.0
BcaB06g28606 Brassica carinata HOM05D003691 ORTHO05D004288 2.1e-171 606.7 673 52.5
CSS0013476 Camellia sinensis var. sinensis HOM05D003691 ORTHO05D004288 2.8e-171 606.3 498 63.1
Cpa.g.sc87.104 Carica papaya HOM05D003691 ORTHO05D004288 3.8e-168 595.9 514 60.9
Ciclev10007620m.g Citrus clementina HOM05D003691 ORTHO05D004288 7.1e-167 591.7 700 50.6
HPP92_023149 Vanilla planifolia HOM05D003691 ORTHO05D004288 1.0e-165 587.8 657 51.3
Ah.06g182530 Amaranthus hybridus HOM05D003691 ORTHO05D004288 5.1e-165 585.5 687 50.2
RcHm_v2.0_Chr5g0041001 Rosa chinensis HOM05D003691 ORTHO05D004288 9.6e-164 581.3 642 51.7
FvH4_3g23280 Fragaria vesca HOM05D003691 ORTHO05D004288 1.3e-163 580.9 646 51.2
Haze_09719 Corylus avellana HOM05D003691 ORTHO05D004288 6.2e-163 578.6 716 48.9
BcaB06g28605 Brassica carinata HOM05D003691 ORTHO05D004288 1.4e-162 577.4 632 53.8
GSVIVG01037701001 Vitis vinifera HOM05D003691 ORTHO05D004288 2.6e-161 573.2 643 51.2
BcaB02g10460 Brassica carinata HOM05D003691 ORTHO05D004288 2.9e-160 569.7 506 60.1
MD11G1212100 Malus domestica HOM05D003691 ORTHO05D004288 5.5e-159 565.5 639 50.1
Zm00001eb162990 Zea mays HOM05D003691 ORTHO05D004288 1.3e-157 560.8 651 51.0
FAN21G2044 Fragaria x ananassa HOM05D003691 ORTHO05D004288 1.4e-154 550.8 645 49.8
CiPaw.11G193000 Carya illinoinensis HOM05D003691 ORTHO05D004288 2.5e-148 530.0 511 56.4
FAN11G2344 Fragaria x ananassa HOM05D003691 ORTHO05D004288 5.9e-145 518.8 585 51.1
Hund02022 Selenicereus undatus HOM05D003691 ORTHO05D004288 1.3e-144 517.7 675 45.3
BolC4t27689H Brassica oleracea HOM05D003691 ORTHO05D004288 6.5e-144 515.4 533 54.6
Hund02025 Selenicereus undatus HOM05D003691 ORTHO05D004288 2.5e-140 503.4 675 44.6
AUR62020387 Chenopodium quinoa HOM05D003691 ORTHO05D004288 1.3e-139 501.1 683 45.5
unitig_60.g25819 Utricularia gibba HOM05D003691 ORTHO05D004288 1.7e-139 500.7 665 47.1
Dinv22243 Davidia involucrata HOM05D003691 ORTHO05D004288 4.1e-130 469.5 543 53.8
COL.COLO4_09704 Corchorus olitorius HOM05D003691 ORTHO05D004288 5.0e-128 462.6 498 53.2
Gohir.A07G186000 Gossypium hirsutum HOM05D003691 ORTHO05D004288 1.1e-127 461.5 439 57.2
C04p62100 Brassica napus HOM05D003691 ORTHO05D004288 1.4e-127 461.1 459 57.5
BcaC02g07908 Brassica carinata HOM05D003691 ORTHO05D004288 3.9e-125 453.0 650 44.8
Actinidia10811 Actinidia chinensis HOM05D003691 ORTHO05D004288 2.8e-123 446.8 443 61.2
SEGI_30766 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 5.7e-116 422.5 561 45.8
AUR62015832 Chenopodium quinoa HOM05D003691 ORTHO05D004288 4.1e-114 416.4 593 44.5
Pp3c11_22430 Physcomitrium patens HOM05D003691 ORTHO05D004288 3.5e-113 413.3 644 42.4
Lj8A171G44 Lonicera japonica HOM05D003691 ORTHO05D004288 1.5e-111 407.9 488 49.8
Mapoly0002s0133 Marchantia polymorpha HOM05D003691 ORTHO05D004288 1.8e-109 401.0 713 39.7
AagrBONN_evm.TU.Sc2ySwM_228.2537 Anthoceros agrestis HOM05D003691 ORTHO05D004288 2.0e-108 397.5 692 39.9
Lalb_Chr19g0136071 Lupinus albus HOM05D003691 ORTHO05D004288 2.6e-108 397.1 356 66.3
Oeu036739.1 Olea europaea HOM05D003691 ORTHO05D004288 4.0e-101 373.2 265 74.3
SEGI_37895 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 2.0e-100 370.9 551 43.7
CBR_g26183 Chara braunii HOM05D003691 ORTHO05D004288 9.8e-100 368.6 727 37.4
AUR62020385 Chenopodium quinoa HOM05D003691 ORTHO05D004288 8.6e-96 355.5 350 57.4
FAN25G2100 Fragaria x ananassa HOM05D003691 ORTHO05D004288 1.6e-89 334.7 288 60.1
Pp3c7_4280 Physcomitrium patens HOM05D003691 ORTHO05D004288 5.2e-85 319.7 643 37.9
Lalb_Chr19g0136061 Lupinus albus HOM05D003691 ORTHO05D004288 2.0e-84 317.8 279 56.6
MD03G1195700 Malus domestica HOM05D003691 ORTHO05D004288 2.9e-83 313.9 382 46.3
PRCOL_00002032 Prasinoderma coloniale HOM05D003691 ORTHO05D004288 4.4e-68 263.5 628 34.1
MCO04G245 Micromonas commoda HOM05D003691 ORTHO05D004288 5.8e-68 263.1 625 33.6
MD17G1101300 Malus domestica HOM05D003691 ORTHO05D004288 1.9e-66 258.1 261 56.7
Os01g0532800 Oryza sativa ssp. japonica HOM05D003691 ORTHO05D004288 7.8e-65 252.7 304 44.7
SHI10368 Sapria himalayana HOM05D003691 ORTHO05D004288 2.3e-64 251.1 407 41.8
FAN25G2879 Fragaria x ananassa HOM05D003691 ORTHO05D004288 1.5e-63 248.4 324 45.7
Actinidia10812 Actinidia chinensis HOM05D003691 ORTHO05D004288 1.3e-51 208.8 204 53.9
Cfa026695 Carpinus fangiana HOM05D003691 ORTHO05D004288 8.4e-43 179.5 714 28.0
Sed0010458 Sechium edule HOM05D003691 ORTHO05D004288 1.3e-40 172.2 244 43.0
CDE09G1127 Ceratophyllum demersum HOM05D003691 ORTHO05D004288 3.1e-37 161.0 209 47.4
Lj8A171G43 Lonicera japonica HOM05D003691 ORTHO05D004288 6.0e-33 146.7 170 51.8
C04p62090 Brassica napus HOM05D003691 ORTHO05D004288 1.0e-27 129.4 130 55.4
CAN.G574.39 Capsicum annuum HOM05D003691 ORTHO05D004288 1.4e-21 109.0 88 62.5
MD03G1195600 Malus domestica HOM05D003691 ORTHO05D004288 3.1e-21 107.8 164 42.1
arahy.Tifrunner.gnm1.ann1.NAA2I0 Arachis hypogaea HOM05D003691 ORTHO05D004288 1.2e-20 105.9 61 86.9
SEGI_16706 Sequoiadendron giganteum HOM05D003691 ORTHO05D017750 1.5e-20 105.5 115 51.3
ATR0772G025 Amborella trichopoda HOM05D003691 ORTHO05D004288 3.2e-18 97.8 112 46.4
Dinv22244 Davidia involucrata HOM05D007542 ORTHO05D009519 2.1e-17 95.1 80 62.5
CAN.G574.40 Capsicum annuum HOM05D003691 ORTHO05D004288 1.8e-16 92.0 68 64.7
EL10Ac4g08622 Beta vulgaris HOM05D003691 ORTHO05D019836 2.6e-15 88.2 127 44.1
SEGI_15855 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 1.3e-14 85.9 116 46.6
Rhsim07G0255900 Rhododendron simsii HOM05D000234 ORTHO05D004288 1.8e-13 82.0 109 45.9
Actinidia03601 Actinidia chinensis HOM05D003691 ORTHO05D004288 2.2e-11 75.1 51 74.5
SHI10370 Sapria himalayana HOM05D000105 ORTHO05D000023 3.8e-11 74.3 56 66.1
SHI10371 Sapria himalayana HOM05D003691 ORTHO05D004288 3.2e-10 71.2 88 51.1
Glyma.13G310451 Glycine max HOM05D003691 ORTHO05D004288 5.5e-10 70.5 48 66.7
TPR.G35222 Trifolium pratense HOM05D003691 ORTHO05D004288 5.5e-10 70.5 60 55.0
MD17G1101200 Malus domestica HOM05D003691 ORTHO05D004288 8.0e-09 66.6 110 40.0
TPR.G2961 Trifolium pratense HOM05D001978 ORTHO05D003036 1.4e-08 65.9 43 67.4
Lj8A127T49 Lonicera japonica HOM05D003691 ORTHO05D004288 6.7e-08 63.5 76 48.7
MD17G1101000 Malus domestica HOM05D003691 ORTHO05D004288 2.6e-07 61.6 46 58.7
Dinv17119 Davidia involucrata HOM05D003691 ORTHO05D004288 7.4e-07 60.1 77 44.2


User provided reference genes

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