Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_019706 Daucus carota HOM05D004793 ORTHO05D004423 2.2e-73 278.9 138 100.0
Ciclev10017917m.g Citrus clementina HOM05D004793 ORTHO05D004423 1.5e-13 80.1 139 42.4
Sabra14G0125700 Salix brachista HOM05D004793 ORTHO05D004423 2.8e-12 75.9 143 41.3
Hma1.2p1_0133F.1_g061430 Hydrangea macrophylla HOM05D004793 ORTHO05D004423 1.8e-11 73.2 138 38.4
Hma1.2p1_1825F.1_g304390 Hydrangea macrophylla HOM05D004793 ORTHO05D004423 1.8e-11 73.2 138 38.4
Potri.014G165000 Populus trichocarpa HOM05D004793 ORTHO05D004423 3.1e-11 72.4 143 39.9
QL08p028591 Quercus lobata HOM05D004793 ORTHO05D004423 3.1e-11 72.4 137 38.0
Duzib138G1142 Durio zibethinus HOM05D004793 ORTHO05D004423 8.9e-11 70.9 138 39.1
Thecc.01G191000 Theobroma cacao HOM05D004793 ORTHO05D004423 2.0e-10 69.7 138 39.1
Psat2g004520 Pisum sativum HOM05D004793 ORTHO05D004423 3.4e-10 68.9 126 42.1
Gohir.D07G197000 Gossypium hirsutum HOM05D004793 ORTHO05D004423 7.5e-10 67.8 138 39.1
Gorai.001G220800 Gossypium raimondii HOM05D004793 ORTHO05D004423 7.5e-10 67.8 138 39.1
FAN14G5076 Fragaria x ananassa HOM05D004793 ORTHO05D004423 9.8e-10 67.4 141 39.0
Gohir.A07G190700 Gossypium hirsutum HOM05D004793 ORTHO05D004423 9.8e-10 67.4 138 39.1
GSVIVG01037785001 Vitis vinifera HOM05D004793 ORTHO05D004423 9.8e-10 67.4 141 39.7
Manes.13G062900 Manihot esculenta HOM05D004793 ORTHO05D004423 1.3e-09 67.0 138 37.0
FvH4_6g41090 Fragaria vesca HOM05D004793 ORTHO05D004423 1.7e-09 66.6 141 39.0
CiPaw.03G278900 Carya illinoinensis HOM05D004793 ORTHO05D004423 2.9e-09 65.9 136 39.7
CAN.G1397.7 Capsicum annuum HOM05D037802 ORTHO05D004423 3.7e-09 65.5 127 38.6
Nn1g07451 Nelumbo nucifera HOM05D004793 ORTHO05D004423 4.9e-09 65.1 138 39.9
COL.COLO4_08493 Corchorus olitorius HOM05D004793 ORTHO05D004423 1.4e-08 63.5 135 40.7
Manes.12G061300 Manihot esculenta HOM05D004793 ORTHO05D004423 1.9e-08 63.2 139 41.0
Medtr5g097300 Medicago truncatula HOM05D004793 ORTHO05D004423 1.9e-08 63.2 138 37.0
Prupe.3G201300 Prunus persica HOM05D004793 ORTHO05D004423 1.9e-08 63.2 139 35.3
Cpa.g.sc211.5 Carica papaya HOM05D004793 ORTHO05D004423 3.2e-08 62.4 133 38.3
Eucgr.K00650 Eucalyptus grandis HOM05D004793 ORTHO05D004423 3.2e-08 62.4 145 38.6
Atru.chr6.3360 Acer truncatum HOM05D004793 ORTHO05D004423 4.1e-08 62.0 137 38.0
RcHm_v2.0_Chr2g0156651 Rosa chinensis HOM05D004793 ORTHO05D004423 9.2e-08 60.8 139 36.0
Nn1g03234 Nelumbo nucifera HOM05D004793 ORTHO05D004423 1.2e-07 60.5 138 38.4
TAR627G0453 Trochodendron aralioides HOM05D004793 ORTHO05D004423 1.2e-07 60.5 138 39.1
LjContig00081g0018270 Lotus japonicus HOM05D004793 ORTHO05D004423 1.6e-07 60.1 143 38.5
Eucgr.A01045 Eucalyptus grandis HOM05D004793 ORTHO05D004423 2.7e-07 59.3 128 40.6
Manes.03G138300 Manihot esculenta HOM05D004793 ORTHO05D004423 2.7e-07 59.3 138 36.2
TPR.G1320 Trifolium pratense HOM05D004793 ORTHO05D004423 4.6e-07 58.5 138 34.8
Aqoxy1G04226 Aquilegia oxysepala HOM05D004793 ORTHO05D004423 7.8e-07 57.8 139 33.1
Oeu057608.1 Olea europaea HOM05D004793 ORTHO05D004423 7.8e-07 57.8 126 38.1
Oeu064364.1 Olea europaea HOM05D004793 ORTHO05D004423 7.8e-07 57.8 126 38.1
Gorai.001G099200 Gossypium raimondii HOM05D004793 ORTHO05D004423 1.3e-06 57.0 135 37.0
CiPaw.09G105400 Carya illinoinensis HOM05D004793 ORTHO05D004423 2.3e-06 56.2 153 34.0
Glyma.14G007800 Glycine max HOM05D004793 ORTHO05D004423 2.3e-06 56.2 142 35.9
Gohir.D07G092600 Gossypium hirsutum HOM05D004793 ORTHO05D004423 2.3e-06 56.2 135 37.0
CSS0020838 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 5.1e-06 55.1 126 39.7
CSS0047668 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 5.1e-06 55.1 126 39.7
Haze_06976 Corylus avellana HOM05D004793 ORTHO05D004423 5.1e-06 55.1 140 35.7
PGR004G1083 Punica granatum HOM05D004793 ORTHO05D004423 6.6e-06 54.7 146 35.6
Cfa000070 Carpinus fangiana HOM05D004793 ORTHO05D004423 8.6e-06 54.3 127 37.0


User provided reference genes

Program Settings