Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_019636 Daucus carota HOM05D004022 ORTHO05D004090 1.9e-44 182.2 96 100.0
DCAR_021057 Daucus carota HOM05D004022 ORTHO05D004090 5.8e-17 90.9 94 54.3
Medtr2g070550 Medicago truncatula HOM05D004022 ORTHO05D004090 1.3e-08 63.2 74 44.6
TAR627G0510 Trochodendron aralioides HOM05D004022 ORTHO05D004090 1.7e-08 62.8 81 48.1
unitig_746.g26690 Utricularia gibba HOM05D004022 ORTHO05D004090 2.2e-08 62.4 47 68.1
CSS0036966 Camellia sinensis var. sinensis HOM05D004022 ORTHO05D004090 2.9e-08 62.0 101 41.6
ECA236G3547 Erigeron canadensis HOM05D004022 ORTHO05D004090 6.4e-08 60.8 93 43.0
FAN25G3340 Fragaria x ananassa HOM05D004022 ORTHO05D004090 1.4e-07 59.7 50 58.0
FvH4_3g16620 Fragaria vesca HOM05D004022 ORTHO05D004090 1.9e-07 59.3 50 58.0
FAN11G3697 Fragaria x ananassa HOM05D004022 ORTHO05D004090 1.9e-07 59.3 50 58.0
FAN16G3013 Fragaria x ananassa HOM05D004022 ORTHO05D004090 1.9e-07 59.3 50 58.0
FAN21G1087 Fragaria x ananassa HOM05D004022 ORTHO05D004090 1.9e-07 59.3 50 58.0
Lsat_1_v5_gn_7_101361 Lactuca sativa HOM05D004022 ORTHO05D004090 1.9e-07 59.3 84 44.0
Glyma.08G176500 Glycine max HOM05D004022 ORTHO05D004090 2.4e-07 58.9 83 38.6
THA.LOC104813977 Tarenaya hassleriana HOM05D004022 ORTHO05D004090 2.4e-07 58.9 45 62.2
Glyma.15G249800 Glycine max HOM05D004022 ORTHO05D004090 3.2e-07 58.5 83 39.8
Lalb_Chr25g0285381 Lupinus albus HOM05D004022 ORTHO05D004090 3.2e-07 58.5 100 40.0
QL04p070411 Quercus lobata HOM05D004022 ORTHO05D004090 3.2e-07 58.5 47 63.8
QL04p070436 Quercus lobata HOM05D004022 ORTHO05D004090 4.2e-07 58.2 47 63.8
SalBow8G5432 Salvia bowleyana HOM05D004022 ORTHO05D004090 4.2e-07 58.2 88 42.0
unitig_899.g15299 Utricularia gibba HOM05D004022 ORTHO05D004090 4.2e-07 58.2 45 66.7
SalBow8G0217 Salvia bowleyana HOM05D004022 ORTHO05D004090 5.4e-07 57.8 76 44.7
TPR.G26630 Trifolium pratense HOM05D004022 ORTHO05D004090 5.4e-07 57.8 84 42.9
Peaxi162Scf00111g00083 Petunia axillaris HOM05D004022 ORTHO05D004090 9.3e-07 57.0 89 39.3
Phvul.005G051400 Phaseolus vulgaris HOM05D004022 ORTHO05D004090 9.3e-07 57.0 83 39.8
RcHm_v2.0_Chr5g0027761 Rosa chinensis HOM05D004022 ORTHO05D004090 1.2e-06 56.6 49 59.2
QL04p070376 Quercus lobata HOM05D004022 ORTHO05D004090 1.6e-06 56.2 47 61.7
THA.LOC104812289 Tarenaya hassleriana HOM05D004022 ORTHO05D004090 1.6e-06 56.2 57 56.1
Actinidia35177 Actinidia chinensis HOM05D004022 ORTHO05D004090 2.1e-06 55.8 78 39.7
BcaB02g07170 Brassica carinata HOM05D004022 ORTHO05D004090 2.7e-06 55.5 99 36.4
BcaB03g16016 Brassica carinata HOM05D004022 ORTHO05D004090 2.7e-06 55.5 90 38.9
Migut.M00651 Erythranthe guttata HOM05D004022 ORTHO05D004090 2.7e-06 55.5 95 43.2
Lsat_1_v5_gn_7_101401 Lactuca sativa HOM05D004022 ORTHO05D004090 2.7e-06 55.5 95 44.2
Nitab4.5_0000505g0120 Nicotiana tabacum HOM05D004022 ORTHO05D004090 2.7e-06 55.5 83 42.2
Duzib192G0777 Durio zibethinus HOM05D004022 ORTHO05D004090 3.5e-06 55.1 67 46.3
Gohir.D10G042200 Gossypium hirsutum HOM05D004022 ORTHO05D004090 3.5e-06 55.1 32 81.2
Gorai.011G044800 Gossypium raimondii HOM05D004022 ORTHO05D004090 3.5e-06 55.1 32 81.2
Psat1g075360 Pisum sativum HOM05D004022 ORTHO05D004090 3.5e-06 55.1 68 50.0
Thecc.06G149800 Theobroma cacao HOM05D004022 ORTHO05D004090 3.5e-06 55.1 42 59.5
BcaC03g15811 Brassica carinata HOM05D004022 ORTHO05D004090 4.6e-06 54.7 43 65.1
A02p22170 Brassica napus HOM05D004022 ORTHO05D004090 4.6e-06 54.7 43 65.1
C02p35580 Brassica napus HOM05D004022 ORTHO05D004090 4.6e-06 54.7 43 65.1
BolC2t09573H Brassica oleracea HOM05D004022 ORTHO05D004090 4.6e-06 54.7 43 65.1
BraA02t07221Z Brassica rapa HOM05D004022 ORTHO05D004090 4.6e-06 54.7 43 65.1
Duzib213G0178 Durio zibethinus HOM05D004022 ORTHO05D004090 4.6e-06 54.7 87 36.8
Eucgr.F01407 Eucalyptus grandis HOM05D004022 ORTHO05D004090 4.6e-06 54.7 42 59.5
HanXRQChr11g0330361 Helianthus annuus HOM05D004022 ORTHO05D004090 4.6e-06 54.7 36 72.2
arahy.Tifrunner.gnm1.ann1.I20P02 Arachis hypogaea HOM05D004022 ORTHO05D004090 6.0e-06 54.3 49 55.1
Ca_03390_v3 Cicer arietinum L. HOM05D004022 ORTHO05D004090 6.0e-06 54.3 73 39.7
Duzib160G0057 Durio zibethinus HOM05D004022 ORTHO05D004090 6.0e-06 54.3 34 73.5
Gohir.D05G150601 Gossypium hirsutum HOM05D004022 ORTHO05D004090 6.0e-06 54.3 52 51.9
Gorai.009G154700 Gossypium raimondii HOM05D004022 ORTHO05D004090 6.0e-06 54.3 52 51.9
Nitab4.5_0001924g0010 Nicotiana tabacum HOM05D004022 ORTHO05D004090 6.0e-06 54.3 35 74.3
Sp5g33510 Schrenkiella parvula HOM05D004022 ORTHO05D004090 6.0e-06 54.3 56 55.4
CSS0046120 Camellia sinensis var. sinensis HOM05D004022 ORTHO05D004090 7.8e-06 53.9 82 45.1
Carub.0002s2531 Capsella rubella HOM05D004022 ORTHO05D004090 7.8e-06 53.9 43 65.1


User provided reference genes

Program Settings