Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_019618 Daucus carota HOM05D007501 ORTHO05D009528 6.1e-100 367.5 183 100.0
Actinidia03620 Actinidia chinensis HOM05D007501 ORTHO05D009528 7.1e-40 167.9 183 55.7
CSS0000849 Camellia sinensis var. sinensis HOM05D007501 ORTHO05D009528 1.6e-36 156.8 190 51.6
vmacro09418 Vaccinium macrocarpon HOM05D007501 ORTHO05D009528 3.6e-36 155.6 173 53.2
RhsimUnG0206300 Rhododendron simsii HOM05D007501 ORTHO05D009528 4.8e-36 155.2 173 52.0
Cc05_g10640 Coffea canephora HOM05D007501 ORTHO05D009528 6.9e-35 151.4 194 47.4
Oeu059251.1 Olea europaea HOM05D007501 ORTHO05D009528 6.9e-35 151.4 186 50.0
Potri.011G103500 Populus trichocarpa HOM05D007501 ORTHO05D009528 9.0e-35 151.0 189 46.6
GSVIVG01014087001 Vitis vinifera HOM05D007501 ORTHO05D009528 2.0e-34 149.8 188 49.5
Dinv13355 Davidia involucrata HOM05D007501 ORTHO05D009528 6.4e-33 144.8 183 49.2
COL.COLO4_03607 Corchorus olitorius HOM05D007501 ORTHO05D009528 1.4e-32 143.7 192 48.4
Sabra11G0077300 Salix brachista HOM05D007501 ORTHO05D009528 5.4e-32 141.7 174 46.0
Sabra11G0082200 Salix brachista HOM05D007501 ORTHO05D009528 5.4e-32 141.7 174 46.0
QL08p025249 Quercus lobata HOM05D007501 ORTHO05D009528 9.3e-32 141.0 194 45.9
Haze_08443 Corylus avellana HOM05D007501 ORTHO05D009528 1.2e-31 140.6 182 46.7
Gohir.A11G289800 Gossypium hirsutum HOM05D007501 ORTHO05D009528 2.1e-31 139.8 192 49.5
MD03G1250700 Malus domestica HOM05D007501 ORTHO05D009528 2.7e-31 139.4 162 52.5
MD11G1270900 Malus domestica HOM05D007501 ORTHO05D009528 2.7e-31 139.4 189 50.3
Manes.15G099000 Manihot esculenta HOM05D007501 ORTHO05D009528 3.5e-31 139.0 197 46.2
PSO675G1715 Papaver somniferum HOM05D007501 ORTHO05D009528 1.3e-30 137.1 193 46.1
Cfa019508 Carpinus fangiana HOM05D007501 ORTHO05D009528 3.0e-30 136.0 183 44.3
Gohir.D11G302600 Gossypium hirsutum HOM05D007501 ORTHO05D009528 3.9e-30 135.6 189 47.1
Gorai.007G332200 Gossypium raimondii HOM05D007501 ORTHO05D009528 3.9e-30 135.6 189 47.1
PSO541G4098 Papaver somniferum HOM05D007501 ORTHO05D009528 3.9e-30 135.6 193 45.1
Prupe.4G155600 Prunus persica HOM05D007501 ORTHO05D009528 5.1e-30 135.2 191 46.6
Manes.03G078700 Manihot esculenta HOM05D007501 ORTHO05D009528 1.1e-29 134.0 195 43.1
Nn3g20958 Nelumbo nucifera HOM05D007501 ORTHO05D009528 1.1e-29 134.0 165 47.3
TWI39G1127 Tripterygium wilfordii HOM05D007501 ORTHO05D009528 1.9e-29 133.3 173 44.5
Peaxi162Scf01338g00001 Petunia axillaris HOM05D007501 ORTHO05D009528 2.5e-29 132.9 165 47.9
RcHm_v2.0_Chr5g0029351 Rosa chinensis HOM05D007501 ORTHO05D009528 2.5e-29 132.9 193 46.1
Potri.001G382800 Populus trichocarpa HOM05D007501 ORTHO05D009528 3.3e-29 132.5 195 44.1
PGSC0003DMG400021255 Solanum tuberosum HOM05D007501 ORTHO05D009528 5.6e-29 131.7 186 46.8
HanXRQChr11g0331231 Helianthus annuus HOM05D007501 ORTHO05D009528 1.6e-28 130.2 186 44.6
Eucgr.F01372 Eucalyptus grandis HOM05D007501 ORTHO05D009528 2.8e-28 129.4 165 48.5
FvH4_3g17620 Fragaria vesca HOM05D007501 ORTHO05D009528 2.8e-28 129.4 192 44.3
FAN11G3003 Fragaria x ananassa HOM05D007501 ORTHO05D009528 2.8e-28 129.4 192 44.3
Ciclev10024060m.g Citrus clementina HOM05D007501 ORTHO05D009528 3.7e-28 129.0 195 43.1
Sopen10g003430 Solanum pennellii HOM05D007501 ORTHO05D009528 1.1e-27 127.5 183 44.8
FAN21G3657 Fragaria x ananassa HOM05D007501 ORTHO05D009528 1.4e-27 127.1 192 44.3
Solyc10g007490.2 Solanum lycopersicum HOM05D007501 ORTHO05D009528 4.0e-27 125.6 182 42.9
Duzib213G0875 Durio zibethinus HOM05D007501 ORTHO05D009528 1.2e-26 124.0 186 46.2
Glyma.15G211700 Glycine max HOM05D007501 ORTHO05D009528 1.2e-26 124.0 210 41.0
Peaxi162Scf00111g00124 Petunia axillaris HOM05D007501 ORTHO05D009528 1.5e-26 123.6 154 45.5
THA.LOC104822580 Tarenaya hassleriana HOM05D007501 ORTHO05D009528 2.0e-26 123.2 185 41.1
FAN25G1377 Fragaria x ananassa HOM05D007501 ORTHO05D009528 2.6e-26 122.9 192 43.2
Glyma.15G210500 Glycine max HOM05D007501 ORTHO05D009528 2.6e-26 122.9 212 41.0
Aqoxy4G00171 Aquilegia oxysepala HOM05D007501 ORTHO05D009528 7.6e-26 121.3 183 43.2
ECA236G0060 Erigeron canadensis HOM05D007501 ORTHO05D009528 7.6e-26 121.3 185 44.9
arahy.Tifrunner.gnm1.ann1.5U50EQ Arachis hypogaea HOM05D007501 ORTHO05D009528 2.9e-25 119.4 170 43.5
Phvul.011G168000 Phaseolus vulgaris HOM05D007501 ORTHO05D009528 2.9e-25 119.4 213 41.3
Sopen07g030380 Solanum pennellii HOM05D007501 ORTHO05D009528 2.9e-25 119.4 154 48.1
Sp3g12990 Schrenkiella parvula HOM05D007501 ORTHO05D009528 3.8e-25 119.0 188 38.8
BraA01t03953Z Brassica rapa HOM05D007501 ORTHO05D009528 6.4e-25 118.2 190 41.1
Psat4g135600 Pisum sativum HOM05D007501 ORTHO05D009528 1.1e-24 117.5 219 39.3
SGA_v2.0_scaffold73G24380 Striga asiatica HOM05D007501 ORTHO05D009528 1.4e-24 117.1 186 39.8
A01p39060 Brassica napus HOM05D007501 ORTHO05D009528 1.9e-24 116.7 189 40.7
Thhalv10021658m.g Eutrema salsugineum HOM05D007501 ORTHO05D009528 1.9e-24 116.7 187 39.0
AL3G27070 Arabidopsis lyrata HOM05D007501 ORTHO05D009528 2.4e-24 116.3 187 38.0
Nitab4.5_0008460g0030 Nicotiana tabacum HOM05D007501 ORTHO05D009528 2.4e-24 116.3 155 45.8
PGSC0003DMG400043590 Solanum tuberosum HOM05D007501 ORTHO05D009528 2.4e-24 116.3 154 48.7
AT3G14760 Arabidopsis thaliana HOM05D007501 ORTHO05D009528 4.2e-24 115.5 187 39.6
Dinv26703 Davidia involucrata HOM05D007501 ORTHO05D009528 4.2e-24 115.5 136 47.8
BolC1t04925H Brassica oleracea HOM05D007501 ORTHO05D009528 5.5e-24 115.2 190 40.0
Cpa.g.sc682.2 Carica papaya HOM05D007501 ORTHO05D009528 5.5e-24 115.2 172 41.3
Nitab4.5_0001140g0140 Nicotiana tabacum HOM05D007501 ORTHO05D009528 7.1e-24 114.8 150 46.7
VMungo1127G2061 Vigna mungo HOM05D007501 ORTHO05D009528 9.3e-24 114.4 215 38.1
CARHR089710 Cardamine hirsuta HOM05D007501 ORTHO05D009528 1.6e-23 113.6 189 39.2
C01p49690 Brassica napus HOM05D007501 ORTHO05D009528 2.1e-23 113.2 188 38.8
Carub.0003s1443 Capsella rubella HOM05D007501 ORTHO05D009528 4.6e-23 112.1 187 38.0
CiPaw.12G110200 Carya illinoinensis HOM05D007501 ORTHO05D009528 1.0e-22 110.9 188 40.4
PGR083G0065 Punica granatum HOM05D007501 ORTHO05D009528 1.0e-22 110.9 161 44.1
Thecc.07G134800 Theobroma cacao HOM05D007501 ORTHO05D009528 8.7e-22 107.8 191 41.9
BcaC09g48445 Brassica carinata HOM05D007501 ORTHO05D009528 1.9e-21 106.7 184 38.6
TPR.G16483 Trifolium pratense HOM05D007501 ORTHO05D009528 3.3e-21 105.9 218 36.2
arahy.Tifrunner.gnm1.ann1.652QPS Arachis hypogaea HOM05D007501 ORTHO05D009528 7.4e-21 104.8 170 41.2
Lj3g0021891 Lotus japonicus HOM05D007501 ORTHO05D009528 1.3e-20 104.0 209 37.8
CANSAT56G4361 Cannabis sativa HOM05D007501 ORTHO05D009528 1.1e-19 100.9 199 40.2
Nitab4.5_0000383g0020 Nicotiana tabacum HOM05D007501 ORTHO05D009528 1.1e-19 100.9 141 45.4
unitig_62.g23076 Utricularia gibba HOM05D006003 ORTHO05D007388 3.1e-19 99.4 160 41.9
Aa31LG8G1980 Aethionema arabicum HOM05D007501 ORTHO05D009528 5.3e-19 98.6 187 33.7
CAN.G375.54 Capsicum annuum HOM05D007501 ORTHO05D009528 1.5e-18 97.1 155 44.5
Medtr8g042500 Medicago truncatula HOM05D007501 ORTHO05D009528 5.8e-18 95.1 222 36.0
AUR62013946 Chenopodium quinoa HOM05D007501 ORTHO05D009528 1.3e-17 94.0 164 41.5
Migut.M00689 Erythranthe guttata HOM05D007501 ORTHO05D009528 4.9e-17 92.0 180 40.0
Peaxi162Scf00069g01713 Petunia axillaris HOM05D007501 ORTHO05D009528 1.1e-16 90.9 101 48.5
CsaV3_4G032800 Cucumis sativus L. HOM05D007501 ORTHO05D009528 3.2e-16 89.4 183 36.6
SalBow8G3616 Salvia bowleyana HOM05D007501 ORTHO05D009528 3.2e-16 89.4 168 33.9
ATR0681G022 Amborella trichopoda HOM05D007501 ORTHO05D009528 2.3e-14 83.2 163 39.3
AUR62019665 Chenopodium quinoa HOM05D007501 ORTHO05D009528 2.3e-14 83.2 165 40.0
EL10Ac4g08429 Beta vulgaris HOM05D007501 ORTHO05D009528 6.7e-14 81.6 154 37.0
ClCG11G017140 Citrullus lanatus HOM05D007501 ORTHO05D009528 9.7e-13 77.8 157 35.7
Sed0021060 Sechium edule HOM05D007501 ORTHO05D009528 1.6e-12 77.0 76 52.6
MELO3C027342.2 Cucumis melo HOM05D007501 ORTHO05D009528 3.7e-12 75.9 160 35.0
Lalb_Chr03g0031351 Lupinus albus HOM05D007501 ORTHO05D009528 1.2e-10 70.9 162 35.8
Zm00001eb055040 Zea mays HOM05D007501 ORTHO05D009528 5.0e-09 65.5 36 75.0
Os02g0321600 Oryza sativa ssp. japonica HOM05D007501 ORTHO05D009528 8.5e-09 64.7 59 50.8
Zm00001eb314570 Zea mays HOM05D007501 ORTHO05D009528 1.1e-08 64.3 59 52.5
Os02g0320600 Oryza sativa ssp. japonica HOM05D007501 ORTHO05D009528 4.2e-08 62.4 31 83.9
Zm00001eb100670 Zea mays HOM05D007501 ORTHO05D009528 1.2e-07 60.8 33 69.7
SEGI_16996 Sequoiadendron giganteum HOM05D007501 ORTHO05D009528 2.7e-07 59.7 72 51.4
SEGI_41065 Sequoiadendron giganteum HOM05D007501 ORTHO05D009528 2.7e-07 59.7 39 64.1
SMO367G0928 Selaginella moellendorffii HOM05D002803 ORTHO05D003089 5.1e-06 55.5 46 58.7
MD13G1047600 Malus domestica HOM05D002803 ORTHO05D003089 6.7e-06 55.1 32 71.9


User provided reference genes

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