Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_019570 Daucus carota HOM05D006014 ORTHO05D007608 6.0e-95 350.9 187 100.0
Nitab4.5_0003033g0060 Nicotiana tabacum HOM05D006014 ORTHO05D007608 6.7e-62 241.1 180 74.4
CSS0037767 Camellia sinensis var. sinensis HOM05D006014 ORTHO05D007608 2.6e-61 239.2 189 71.4
Hma1.2p1_1411F.1_g281760 Hydrangea macrophylla HOM05D006014 ORTHO05D007608 3.1e-59 232.3 187 69.5
Solyc07g062870.3 Solanum lycopersicum HOM05D006014 ORTHO05D007608 3.5e-58 228.8 180 72.2
Sopen07g031070 Solanum pennellii HOM05D006014 ORTHO05D007608 3.5e-58 228.8 180 72.2
Dinv14938 Davidia involucrata HOM05D006014 ORTHO05D007608 1.0e-57 227.3 189 69.3
Nitab4.5_0013317g0010 Nicotiana tabacum HOM05D006014 ORTHO05D007608 2.9e-57 225.7 183 69.9
PGSC0003DMG400012405 Solanum tuberosum HOM05D006014 ORTHO05D007608 4.2e-56 221.9 188 68.1
Ciclev10009636m.g Citrus clementina HOM05D006014 ORTHO05D007608 9.4e-56 220.7 184 67.9
Thecc.07G096300 Theobroma cacao HOM05D006014 ORTHO05D007608 1.2e-55 220.3 187 70.1
FvH4_3g19430 Fragaria vesca HOM05D006014 ORTHO05D007608 1.6e-55 219.9 188 67.0
FAN11G2300 Fragaria x ananassa HOM05D006014 ORTHO05D007608 1.6e-55 219.9 188 67.0
Peaxi162Scf00069g01737 Petunia axillaris HOM05D006014 ORTHO05D007608 2.1e-55 219.5 180 67.8
FAN21G0470 Fragaria x ananassa HOM05D006014 ORTHO05D007608 2.7e-55 219.2 188 66.5
Cc05_g11740 Coffea canephora HOM05D006014 ORTHO05D007608 4.7e-55 218.4 182 67.6
Nn1g04203 Nelumbo nucifera HOM05D006014 ORTHO05D007608 4.7e-55 218.4 178 69.1
FAN25G0078 Fragaria x ananassa HOM05D006014 ORTHO05D007608 1.4e-54 216.9 188 66.0
Manes.15G089600 Manihot esculenta HOM05D006014 ORTHO05D007608 3.0e-54 215.7 182 67.6
Gorai.009G375600 Gossypium raimondii HOM05D006014 ORTHO05D007608 4.0e-54 215.3 181 68.0
Lsat_1_v5_gn_5_128220 Lactuca sativa HOM05D006014 ORTHO05D007608 4.0e-54 215.3 184 69.6
Gohir.D05G347800 Gossypium hirsutum HOM05D006014 ORTHO05D007608 5.2e-54 214.9 181 68.0
Migut.H01957 Erythranthe guttata HOM05D006014 ORTHO05D007608 8.8e-54 214.2 187 70.1
Gohir.A04G035600 Gossypium hirsutum HOM05D006014 ORTHO05D007608 1.2e-53 213.8 178 69.7
TWI38G2086 Tripterygium wilfordii HOM05D006014 ORTHO05D007608 1.2e-53 213.8 186 65.1
QL08p024005 Quercus lobata HOM05D006014 ORTHO05D007608 5.7e-53 211.5 181 66.3
COL.COLO4_03477 Corchorus olitorius HOM05D006014 ORTHO05D007608 7.5e-53 211.1 186 67.7
Prupe.4G176000 Prunus persica HOM05D006014 ORTHO05D007608 7.5e-53 211.1 190 64.2
Nitab4.5_0000332g0180 Nicotiana tabacum HOM05D006014 ORTHO05D007608 9.8e-53 210.7 180 66.7
GSVIVG01014290001 Vitis vinifera HOM05D006014 ORTHO05D007608 9.8e-53 210.7 177 68.9
HanXRQChr10g0302621 Helianthus annuus HOM05D006014 ORTHO05D007608 4.8e-52 208.4 185 67.6
RcHm_v2.0_Chr5g0032711 Rosa chinensis HOM05D006014 ORTHO05D007608 4.8e-52 208.4 186 65.1
CiPaw.11G167800 Carya illinoinensis HOM05D006014 ORTHO05D007608 4.1e-51 205.3 151 72.8
Oeu051088.1 Olea europaea HOM05D006014 ORTHO05D007608 5.4e-51 204.9 181 68.0
SalBow8G3070 Salvia bowleyana HOM05D006014 ORTHO05D007608 9.1e-51 204.1 175 67.4
Duzib170G0605 Durio zibethinus HOM05D006014 ORTHO05D007608 1.2e-50 203.8 188 64.4
CANSAT35G1465 Cannabis sativa HOM05D006014 ORTHO05D007608 2.0e-50 203.0 183 67.8
TAR626G1430 Trochodendron aralioides HOM05D006014 ORTHO05D007608 2.7e-50 202.6 182 65.4
ClCG11G017820 Citrullus lanatus HOM05D006014 ORTHO05D007608 7.7e-50 201.1 174 66.7
Haze_09409 Corylus avellana HOM05D005607 ORTHO05D008142 7.7e-50 201.1 145 74.5
Nitab4.5_0002330g0100 Nicotiana tabacum HOM05D006014 ORTHO05D007608 1.3e-49 200.3 199 60.8
MELO3C025609.2 Cucumis melo HOM05D006014 ORTHO05D007608 1.7e-49 199.9 180 63.9
PGR083G0398 Punica granatum HOM05D006014 ORTHO05D007608 2.2e-49 199.5 177 66.7
Sed0004006 Sechium edule HOM05D006014 ORTHO05D007608 2.2e-49 199.5 179 63.7
MSTRG.12894 Avicennia marina HOM05D006014 ORTHO05D007608 2.9e-49 199.1 173 67.1
MD11G1253300 Malus domestica HOM05D006014 ORTHO05D007608 5.0e-49 198.4 183 61.7
MD03G1232600 Malus domestica HOM05D006014 ORTHO05D007608 6.5e-49 198.0 183 62.3
CsaV3_4G033460 Cucumis sativus L. HOM05D006014 ORTHO05D007608 1.1e-48 197.2 180 63.3
ECA234G0345 Erigeron canadensis HOM05D006014 ORTHO05D007608 1.5e-48 196.8 183 67.8
Oeu037371.1 Olea europaea HOM05D006014 ORTHO05D007608 1.9e-48 196.4 163 69.3
AT3G15190 Arabidopsis thaliana HOM05D006014 ORTHO05D007608 5.5e-48 194.9 197 61.9
Potri.001G396600 Populus trichocarpa HOM05D006014 ORTHO05D007608 1.6e-47 193.4 179 63.1
Sabra16G0259700 Salix brachista HOM05D006014 ORTHO05D007608 1.6e-47 193.4 179 63.1
TPR.G28172 Trifolium pratense HOM05D006014 ORTHO05D007608 2.1e-47 193.0 181 61.3
TAR624G0768 Trochodendron aralioides HOM05D006014 ORTHO05D007608 2.1e-47 193.0 149 71.1
CARHR090180 Cardamine hirsuta HOM05D006014 ORTHO05D007608 2.7e-47 192.6 193 62.2
Lalb_Chr07g0182891 Lupinus albus HOM05D006014 ORTHO05D007608 3.6e-47 192.2 179 60.3
A03p39200 Brassica napus HOM05D006014 ORTHO05D007608 1.0e-46 190.7 198 60.1
AL3G27580 Arabidopsis lyrata HOM05D006014 ORTHO05D007608 1.4e-46 190.3 191 63.4
PSO541G1420 Papaver somniferum HOM05D006014 ORTHO05D007608 2.3e-46 189.5 187 57.8
PSO675G1148 Papaver somniferum HOM05D006014 ORTHO05D007608 2.3e-46 189.5 187 57.8
A01p38830 Brassica napus HOM05D006014 ORTHO05D007608 4.0e-46 188.7 190 62.1
BraA01t03929Z Brassica rapa HOM05D006014 ORTHO05D007608 4.0e-46 188.7 190 62.1
BraA03t13069Z Brassica rapa HOM05D006014 ORTHO05D007608 4.0e-46 188.7 193 60.6
Cfa020606 Carpinus fangiana HOM05D006014 ORTHO05D007608 5.2e-46 188.3 120 81.7
Eucgr.F01167 Eucalyptus grandis HOM05D006014 ORTHO05D007608 5.2e-46 188.3 180 64.4
Glyma.06G236200 Glycine max HOM05D006014 ORTHO05D007608 1.2e-45 187.2 184 61.4
Ah.06g184580 Amaranthus hybridus HOM05D006014 ORTHO05D007608 2.0e-45 186.4 185 58.9
C01p49380 Brassica napus HOM05D006014 ORTHO05D007608 2.0e-45 186.4 192 60.9
BolC1t04895H Brassica oleracea HOM05D006014 ORTHO05D007608 2.6e-45 186.0 192 60.9
Psat4g136440 Pisum sativum HOM05D006014 ORTHO05D007608 2.6e-45 186.0 180 59.4
Glyma.12G162300 Glycine max HOM05D006014 ORTHO05D007608 3.4e-45 185.7 180 62.2
Aqoxy1G02326 Aquilegia oxysepala HOM05D006014 ORTHO05D007608 7.5e-45 184.5 184 58.7
Thhalv10021521m.g Eutrema salsugineum HOM05D006014 ORTHO05D007608 7.5e-45 184.5 204 57.4
BcaB04g20944 Brassica carinata HOM05D006014 ORTHO05D007608 9.8e-45 184.1 184 62.0
Sc03g0010200 Simmondsia chinensis HOM05D006014 ORTHO05D007608 1.7e-44 183.3 180 60.0
AUR62036161 Chenopodium quinoa HOM05D006014 ORTHO05D007608 2.2e-44 183.0 184 59.2
Sp3g13400 Schrenkiella parvula HOM05D006014 ORTHO05D007608 2.2e-44 183.0 203 58.6
Aa31LG8G2390 Aethionema arabicum HOM05D006014 ORTHO05D007608 2.8e-44 182.6 199 57.8
BcaB06g29543 Brassica carinata HOM05D006014 ORTHO05D007608 2.8e-44 182.6 201 58.7
AUR62019472 Chenopodium quinoa HOM05D006014 ORTHO05D007608 2.8e-44 182.6 184 59.2
Carub.0003s1484 Capsella rubella HOM05D006014 ORTHO05D007608 3.7e-44 182.2 191 59.7
Lj3g0022855 Lotus japonicus HOM05D006014 ORTHO05D007608 3.7e-44 182.2 173 61.3
THA.LOC104815561 Tarenaya hassleriana HOM05D006014 ORTHO05D007608 6.3e-44 181.4 197 57.9
EL10Ac4g08237 Beta vulgaris HOM05D006014 ORTHO05D007608 1.1e-43 180.6 185 57.8
Ca_23028_v3 Cicer arietinum L. HOM05D006014 ORTHO05D007608 5.4e-43 178.3 173 59.5
Ca_23030_v3 Cicer arietinum L. HOM05D006014 ORTHO05D007608 5.4e-43 178.3 173 59.5
VMungo1127G0848 Vigna mungo HOM05D006014 ORTHO05D007608 5.4e-43 178.3 188 59.6
A05p34280 Brassica napus HOM05D006014 ORTHO05D007608 7.0e-43 177.9 195 58.5
C05p52040 Brassica napus HOM05D006014 ORTHO05D007608 7.0e-43 177.9 195 58.5
BraA05t22249Z Brassica rapa HOM05D006014 ORTHO05D007608 7.0e-43 177.9 195 58.5
Medtr8g061350 Medicago truncatula HOM05D006014 ORTHO05D007608 4.5e-42 175.3 181 58.0
Rhsim04G0022600 Rhododendron simsii HOM05D006014 ORTHO05D007608 4.5e-42 175.3 177 57.6
Hund04492 Selenicereus undatus HOM05D006014 ORTHO05D007608 4.5e-42 175.3 186 54.3
arahy.Tifrunner.gnm1.ann1.FY4UJ9 Arachis hypogaea HOM05D006014 ORTHO05D007608 7.7e-42 174.5 214 53.7
BcaC01g03887 Brassica carinata HOM05D006014 ORTHO05D007608 1.3e-41 173.7 131 71.0
C03p47570 Brassica napus HOM05D006014 ORTHO05D007608 1.3e-41 173.7 131 71.0
BolC3t17032H Brassica oleracea HOM05D006014 ORTHO05D007608 1.7e-41 173.3 131 71.0
MBI07_g30170_MAGBIO Magnolia biondii HOM05D006014 ORTHO05D007608 1.7e-41 173.3 132 71.2
CDE10G0058 Ceratophyllum demersum HOM05D006014 ORTHO05D007608 2.3e-41 172.9 174 58.6
CDE10G1292 Ceratophyllum demersum HOM05D006014 ORTHO05D007608 3.8e-41 172.2 178 57.3
Phvul.011G162800 Phaseolus vulgaris HOM05D006014 ORTHO05D007608 8.6e-41 171.0 188 56.9
unitig_749.g13531 Utricularia gibba HOM05D005607 ORTHO05D008142 4.7e-39 165.2 182 58.8
Actinidia35240 Actinidia chinensis HOM05D006014 ORTHO05D007608 2.0e-37 159.8 117 76.1
SEGI_01083 Sequoiadendron giganteum HOM05D006014 ORTHO05D007608 3.4e-37 159.1 183 57.9
Sed0026173 Sechium edule HOM05D006014 ORTHO05D007608 5.7e-37 158.3 179 53.6
ATR0737G141 Amborella trichopoda HOM05D006014 ORTHO05D007608 1.7e-36 156.8 114 72.8
TWI39G1175 Tripterygium wilfordii HOM05D006014 ORTHO05D007608 2.9e-36 156.0 129 67.4
arahy.Tifrunner.gnm1.ann1.QT5AN8 Arachis hypogaea HOM05D006014 ORTHO05D007608 9.2e-35 151.0 265 43.4
Lj8A154T77 Lonicera japonica HOM05D006014 ORTHO05D007608 3.1e-30 136.0 179 51.4
Lj3g0017472 Lotus japonicus HOM05D006014 ORTHO05D007608 5.2e-30 135.2 110 65.5
Mapoly0009s0159 Marchantia polymorpha HOM05D006014 ORTHO05D007608 7.5e-29 131.3 183 48.1
Os01g0678600 Oryza sativa ssp. japonica HOM05D006014 ORTHO05D007608 2.9e-28 129.4 128 57.0
Zm00001eb360330 Zea mays HOM05D006014 ORTHO05D007608 8.3e-28 127.9 115 63.5
Pp3c20_13390 Physcomitrium patens HOM05D006014 ORTHO05D007608 2.4e-27 126.3 129 55.0
Pp3c24_17080 Physcomitrium patens HOM05D006014 ORTHO05D007608 1.2e-26 124.0 178 47.8
CBR_g30802 Chara braunii HOM05D006014 ORTHO05D007608 1.1e-24 117.5 112 58.9
SGA_v2.0_scaffold70G23686 Striga asiatica HOM05D006014 ORTHO05D007608 1.9e-24 116.7 348 33.3
BcaC09g48477 Brassica carinata HOM05D006014 ORTHO05D007608 2.8e-23 112.8 152 54.6
vmacro09523 Vaccinium macrocarpon HOM05D006014 ORTHO05D007608 2.8e-23 112.8 83 67.5
AagrBONN_evm.TU.Sc2ySwM_344.3794 Anthoceros agrestis HOM05D006014 ORTHO05D007608 2.0e-21 106.7 182 39.6
Dinv20203 Davidia involucrata HOM05D006014 ORTHO05D007608 7.1e-19 98.2 112 55.4
Cpa.g.sc131.85 Carica papaya HOM05D006014 ORTHO05D007608 1.6e-18 97.1 114 57.0
Cre12.g494750 Chlamydomonas reinhardtii HOM05D006014 ORTHO05D007608 1.7e-17 93.6 144 44.4
CBR_g39307 Chara braunii HOM05D006014 ORTHO05D007608 8.6e-17 91.3 77 62.3
Gohir.A13G146850 Gossypium hirsutum HOM05D006014 ORTHO05D007608 1.7e-12 77.0 61 72.1
MCO10G118 Micromonas commoda HOM05D006014 ORTHO05D007608 7.1e-11 71.6 91 45.1
HPP92_010061 Vanilla planifolia HOM05D006014 ORTHO05D007608 8.6e-09 64.7 113 46.9
Atru.chr2.2408 Acer truncatum HOM05D006014 ORTHO05D007608 2.5e-08 63.2 52 67.3
QL11p029078 Quercus lobata HOM05D006014 ORTHO05D013998 3.1e-06 56.2 81 45.7


User provided reference genes

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