Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_019488 Daucus carota HOM05D013903 ORTHO05D010053 3.4e-42 174.5 82 100.0
DCAR_019487 Daucus carota HOM05D013903 ORTHO05D010053 6.4e-41 170.2 82 96.3
Sc25g0005050 Simmondsia chinensis HOM05D013903 ORTHO05D010053 4.8e-12 74.3 75 50.7
Solyc10g074465.1 Solanum lycopersicum HOM05D010058 ORTHO05D010053 6.2e-12 73.9 76 47.4
Solyc10g074447.1 Solanum lycopersicum HOM05D010058 ORTHO05D010053 1.1e-11 73.2 76 47.4
THA.LOC109116887 Tarenaya hassleriana HOM05D010086 ORTHO05D010053 1.8e-11 72.4 75 46.7
THA.LOC109116902 Tarenaya hassleriana HOM05D010086 ORTHO05D010053 9.0e-11 70.1 72 47.2
GSVIVG01004335001 Vitis vinifera HOM05D013903 ORTHO05D010053 1.2e-10 69.7 66 47.0
GSVIVG01001774001 Vitis vinifera HOM05D013903 ORTHO05D010053 1.5e-10 69.3 67 52.2
Solyc10g074443.1 Solanum lycopersicum HOM05D010058 ORTHO05D010053 2.0e-10 68.9 75 46.7
Potri.001G401800 Populus trichocarpa HOM05D013903 ORTHO05D010053 5.8e-10 67.4 70 48.6
Thecc.04G269000 Theobroma cacao HOM05D010058 ORTHO05D010053 5.8e-10 67.4 72 44.4
A09p04690 Brassica napus HOM05D010086 ORTHO05D010053 7.6e-10 67.0 79 43.0
BraA09t36106Z Brassica rapa HOM05D010086 ORTHO05D010053 7.6e-10 67.0 79 43.0
CAN.G960.14 Capsicum annuum HOM05D010058 ORTHO05D010053 2.2e-09 65.5 53 50.9
Migut.K00030 Erythranthe guttata HOM05D013903 ORTHO05D010053 3.8e-09 64.7 68 44.1
Carub.0008s0863 Capsella rubella HOM05D010086 ORTHO05D010053 6.5e-09 63.9 79 43.0
Gohir.D01G011300 Gossypium hirsutum HOM05D010058 ORTHO05D010053 8.4e-09 63.5 77 46.8
Gorai.002G013200 Gossypium raimondii HOM05D010058 ORTHO05D010053 8.4e-09 63.5 77 46.8
BcaC06g30726 Brassica carinata HOM05D010086 ORTHO05D010053 1.4e-08 62.8 79 40.5
THA.LOC104818938 Tarenaya hassleriana HOM05D010086 ORTHO05D010053 1.4e-08 62.8 77 45.5
Gohir.D01G011000 Gossypium hirsutum HOM05D010058 ORTHO05D010053 1.9e-08 62.4 76 43.4
Thhalv10005578m.g Eutrema salsugineum HOM05D010086 ORTHO05D010053 3.2e-08 61.6 84 39.3
Gohir.D01G011200 Gossypium hirsutum HOM05D010058 ORTHO05D010053 3.2e-08 61.6 77 46.8
Gohir.D01G011100 Gossypium hirsutum HOM05D010058 ORTHO05D010053 4.2e-08 61.2 76 43.4
Gorai.002G013100 Gossypium raimondii HOM05D010058 ORTHO05D010053 7.1e-08 60.5 77 45.5
CAN.G1320.8 Capsicum annuum HOM05D010058 ORTHO05D010053 9.3e-08 60.1 56 42.9
Sopen10g026930 Solanum pennellii HOM05D000002 ORTHO05D000001 2.1e-07 58.9 49 44.9
Glyma.06G272000 Glycine max HOM05D011857 ORTHO05D010053 3.5e-07 58.2 71 35.2
Gohir.A01G013201 Gossypium hirsutum HOM05D010058 ORTHO05D010053 4.6e-07 57.8 77 42.9
Aa31sc98G20 Aethionema arabicum HOM05D010086 ORTHO05D010053 6.1e-07 57.4 55 43.6
Gohir.A01G012250 Gossypium hirsutum HOM05D010058 ORTHO05D010053 6.1e-07 57.4 77 44.2
Manes.15G086200 Manihot esculenta HOM05D013903 ORTHO05D010053 6.1e-07 57.4 68 39.7
Phvul.010G002400 Phaseolus vulgaris HOM05D011857 ORTHO05D010053 1.0e-06 56.6 71 38.0
Cc10_g10130 Coffea canephora HOM05D013903 ORTHO05D010053 1.3e-06 56.2 73 38.4
Cc10_g10140 Coffea canephora HOM05D013903 ORTHO05D010053 1.3e-06 56.2 73 38.4
CARHR106230 Cardamine hirsuta HOM05D010086 ORTHO05D010053 1.8e-06 55.8 55 47.3
Nn3g17736 Nelumbo nucifera HOM05D014595 ORTHO05D010053 2.3e-06 55.5 73 38.4
Glyma.06G272100 Glycine max HOM05D011857 ORTHO05D010053 6.7e-06 53.9 77 36.4
Sopen10g026960 Solanum pennellii HOM05D000002 ORTHO05D000001 6.7e-06 53.9 42 47.6
Gohir.A01G014151 Gossypium hirsutum HOM05D010058 ORTHO05D010053 8.7e-06 53.5 58 43.1


User provided reference genes

Program Settings