Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_019487 Daucus carota HOM05D013903 ORTHO05D010053 2.0e-42 175.3 82 100.0
DCAR_019488 Daucus carota HOM05D013903 ORTHO05D010053 6.4e-41 170.2 82 96.3
Sc25g0005050 Simmondsia chinensis HOM05D013903 ORTHO05D010053 6.2e-12 73.9 75 50.7
THA.LOC109116887 Tarenaya hassleriana HOM05D010086 ORTHO05D010053 1.4e-11 72.8 75 46.7
Solyc10g074447.1 Solanum lycopersicum HOM05D010058 ORTHO05D010053 3.1e-11 71.6 76 46.1
Solyc10g074465.1 Solanum lycopersicum HOM05D010058 ORTHO05D010053 4.0e-11 71.2 76 46.1
Solyc10g074443.1 Solanum lycopersicum HOM05D010058 ORTHO05D010053 6.9e-11 70.5 75 48.0
THA.LOC109116902 Tarenaya hassleriana HOM05D010086 ORTHO05D010053 6.9e-11 70.5 72 47.2
A09p04690 Brassica napus HOM05D010086 ORTHO05D010053 3.4e-10 68.2 79 44.3
BraA09t36106Z Brassica rapa HOM05D010086 ORTHO05D010053 3.4e-10 68.2 79 44.3
Thecc.04G269000 Theobroma cacao HOM05D010058 ORTHO05D010053 3.4e-10 68.2 72 45.8
Potri.001G401800 Populus trichocarpa HOM05D013903 ORTHO05D010053 5.8e-10 67.4 77 46.8
GSVIVG01004335001 Vitis vinifera HOM05D013903 ORTHO05D010053 1.0e-09 66.6 72 43.1
GSVIVG01001774001 Vitis vinifera HOM05D013903 ORTHO05D010053 1.3e-09 66.2 73 46.6
Carub.0008s0863 Capsella rubella HOM05D010086 ORTHO05D010053 5.0e-09 64.3 72 43.1
CAN.G960.14 Capsicum annuum HOM05D010058 ORTHO05D010053 5.0e-09 64.3 53 49.1
Gohir.D01G011300 Gossypium hirsutum HOM05D010058 ORTHO05D010053 6.5e-09 63.9 71 49.3
Gorai.002G013200 Gossypium raimondii HOM05D010058 ORTHO05D010053 6.5e-09 63.9 71 49.3
Gohir.D01G011000 Gossypium hirsutum HOM05D010058 ORTHO05D010053 8.4e-09 63.5 70 45.7
Gohir.D01G011200 Gossypium hirsutum HOM05D010058 ORTHO05D010053 1.1e-08 63.2 71 49.3
Migut.K00030 Erythranthe guttata HOM05D013903 ORTHO05D010053 1.4e-08 62.8 70 44.3
Thhalv10005578m.g Eutrema salsugineum HOM05D010086 ORTHO05D010053 1.4e-08 62.8 84 40.5
Gohir.D01G011100 Gossypium hirsutum HOM05D010058 ORTHO05D010053 1.4e-08 62.8 70 45.7
Gorai.002G013100 Gossypium raimondii HOM05D010058 ORTHO05D010053 2.5e-08 62.0 71 47.9
THA.LOC104818938 Tarenaya hassleriana HOM05D010086 ORTHO05D010053 2.5e-08 62.0 77 45.5
BcaC06g30726 Brassica carinata HOM05D010086 ORTHO05D010053 9.3e-08 60.1 79 39.2
Gohir.A01G012250 Gossypium hirsutum HOM05D010058 ORTHO05D010053 2.1e-07 58.9 71 47.9
Sopen10g026930 Solanum pennellii HOM05D000002 ORTHO05D000001 2.1e-07 58.9 49 44.9
Gohir.A01G013201 Gossypium hirsutum HOM05D010058 ORTHO05D010053 3.5e-07 58.2 71 45.1
CAN.G1320.8 Capsicum annuum HOM05D010058 ORTHO05D010053 4.6e-07 57.8 56 41.1
Manes.15G086200 Manihot esculenta HOM05D013903 ORTHO05D010053 6.1e-07 57.4 77 36.4
Aa31sc98G20 Aethionema arabicum HOM05D010086 ORTHO05D010053 7.9e-07 57.0 54 44.4
Phvul.010G002400 Phaseolus vulgaris HOM05D011857 ORTHO05D010053 7.9e-07 57.0 79 38.0
Glyma.06G272000 Glycine max HOM05D011857 ORTHO05D010053 1.0e-06 56.6 71 42.3
Nn3g17736 Nelumbo nucifera HOM05D014595 ORTHO05D010053 1.0e-06 56.6 65 43.1
Cc10_g10130 Coffea canephora HOM05D013903 ORTHO05D010053 1.3e-06 56.2 71 38.0
Cc10_g10140 Coffea canephora HOM05D013903 ORTHO05D010053 1.3e-06 56.2 71 38.0
Nn3g17741 Nelumbo nucifera HOM05D014595 ORTHO05D015167 2.3e-06 55.5 74 40.5
Glyma.06G272100 Glycine max HOM05D011857 ORTHO05D010053 3.0e-06 55.1 77 39.0
CARHR106230 Cardamine hirsuta HOM05D010086 ORTHO05D010053 3.9e-06 54.7 55 45.5
ClCG09G010130 Citrullus lanatus HOM05D013903 ORTHO05D010053 5.1e-06 54.3 72 36.1
Sopen10g026960 Solanum pennellii HOM05D000002 ORTHO05D000001 6.7e-06 53.9 42 47.6
Gohir.A01G014151 Gossypium hirsutum HOM05D010058 ORTHO05D010053 8.7e-06 53.5 58 43.1


User provided reference genes

Program Settings