Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_019393 Daucus carota HOM05D005968 ORTHO05D007158 1.0e-187 659.8 311 100.0
Dinv41378 Davidia involucrata HOM05D005968 ORTHO05D007158 4.7e-169 597.8 311 88.7
CSS0021374 Camellia sinensis var. sinensis HOM05D005968 ORTHO05D007158 3.4e-167 591.7 311 87.8
CiPaw.15G168400 Carya illinoinensis HOM05D005968 ORTHO05D007158 2.2e-166 589.0 311 86.5
Atru.chr7.47_Atru.chr7.48 Acer truncatum HOM05D005968 ORTHO05D007158 2.9e-166 588.6 305 88.2
FvH4_1g00920 Fragaria vesca HOM05D005968 ORTHO05D007158 1.9e-165 585.9 307 88.3
Manes.14G143600 Manihot esculenta HOM05D005968 ORTHO05D007158 1.9e-165 585.9 305 87.9
Nn8g39893 Nelumbo nucifera HOM05D005968 ORTHO05D007158 3.2e-165 585.1 311 86.5
Hma1.2p1_0222F.1_g093590 Hydrangea macrophylla HOM05D005968 ORTHO05D007158 4.1e-165 584.7 313 86.9
PGSC0003DMG400011184 Solanum tuberosum HOM05D005968 ORTHO05D007158 5.4e-165 584.3 311 86.8
Prupe.7G263000 Prunus persica HOM05D005968 ORTHO05D007158 1.2e-164 583.2 307 87.0
Dinv42854 Davidia involucrata HOM05D005968 ORTHO05D007158 2.1e-164 582.4 307 87.6
Glyma.17G073700 Glycine max HOM05D005968 ORTHO05D007158 4.6e-164 581.3 311 85.2
Glyma.02G204100 Glycine max HOM05D005968 ORTHO05D007158 7.8e-164 580.5 311 84.6
Eucgr.C02493 Eucalyptus grandis HOM05D005968 ORTHO05D007158 2.3e-163 578.9 311 84.2
Gorai.004G291800 Gossypium raimondii HOM05D005968 ORTHO05D007158 5.1e-163 577.8 308 86.4
Thecc.09G030600 Theobroma cacao HOM05D005968 ORTHO05D007158 5.1e-163 577.8 307 86.3
Ciclev10008980m.g Citrus clementina HOM05D005968 ORTHO05D007158 6.6e-163 577.4 305 85.9
Lj4g0027447 Lotus japonicus HOM05D005968 ORTHO05D007158 8.6e-163 577.0 311 84.6
ECA236G4418 Erigeron canadensis HOM05D005968 ORTHO05D007158 1.5e-162 576.2 305 85.6
Gohir.D08G273400 Gossypium hirsutum HOM05D005968 ORTHO05D007158 4.3e-162 574.7 308 85.7
Migut.K00326 Erythranthe guttata HOM05D005968 ORTHO05D007158 5.6e-162 574.3 305 85.9
Duzib187G1838 Durio zibethinus HOM05D005968 ORTHO05D007158 9.5e-162 573.5 308 84.7
Potri.006G184300 Populus trichocarpa HOM05D005968 ORTHO05D007158 2.8e-161 572.0 305 85.9
CiPaw.16G111000 Carya illinoinensis HOM05D005968 ORTHO05D007158 4.7e-161 571.2 305 85.9
CANSAT11G2689 Cannabis sativa HOM05D005968 ORTHO05D007158 6.2e-161 570.9 311 83.6
FAN23G3092 Fragaria x ananassa HOM05D005968 ORTHO05D007158 8.1e-161 570.5 307 86.6
PSO561G0082 Papaver somniferum HOM05D005968 ORTHO05D007158 1.4e-160 569.7 305 85.6
PSO111G0029 Papaver somniferum HOM05D005968 ORTHO05D007158 2.3e-160 568.9 305 85.6
Nn2g12378 Nelumbo nucifera HOM05D005968 ORTHO05D007158 6.8e-160 567.4 307 85.3
EL10Ac8g18668 Beta vulgaris HOM05D005968 ORTHO05D007158 4.4e-159 564.7 308 84.4
QL02p093270 Quercus lobata HOM05D005968 ORTHO05D007158 4.4e-159 564.7 307 84.7
Gohir.A08G251800 Gossypium hirsutum HOM05D005968 ORTHO05D007158 2.2e-158 562.4 305 85.9
HanXRQChr09g0245781 Helianthus annuus HOM05D005968 ORTHO05D007158 1.4e-157 559.7 310 83.5
SalBow1G6433 Salvia bowleyana HOM05D005968 ORTHO05D007158 1.9e-157 559.3 308 83.8
Sed0018428 Sechium edule HOM05D005968 ORTHO05D007158 2.4e-157 558.9 307 83.4
Potri.018G106700 Populus trichocarpa HOM05D005968 ORTHO05D007158 3.2e-157 558.5 305 83.3
DCAR_017911 Daucus carota HOM05D005968 ORTHO05D007158 3.5e-156 555.1 317 80.8
THA.LOC104803560 Tarenaya hassleriana HOM05D005968 ORTHO05D007158 1.0e-155 553.5 310 82.9
AL7G21190 Arabidopsis lyrata HOM05D005968 ORTHO05D007158 1.7e-155 552.7 303 81.5
Carub.0007s0964 Capsella rubella HOM05D005968 ORTHO05D007158 3.0e-155 552.0 317 79.8
Aqoxy2G01962_Aqoxy2G01963 Aquilegia oxysepala HOM05D005968 ORTHO05D007158 5.1e-155 551.2 307 83.7
MD15G1144700 Malus domestica HOM05D005968 ORTHO05D007158 5.1e-155 551.2 311 83.9
CARHR238800 Cardamine hirsuta HOM05D005968 ORTHO05D007158 1.5e-154 549.7 302 82.1
Thhalv10025727m.g Eutrema salsugineum HOM05D005968 ORTHO05D007158 1.5e-154 549.7 311 81.0
Sp7g28770 Schrenkiella parvula HOM05D005968 ORTHO05D007158 9.5e-154 547.0 310 80.6
Zm00001eb086780 Zea mays HOM05D005968 ORTHO05D007158 9.5e-154 547.0 306 80.1
AT4G30900 Arabidopsis thaliana HOM05D005968 ORTHO05D007158 1.2e-153 546.6 303 81.2
FAN26G1763 Fragaria x ananassa HOM05D005968 ORTHO05D007158 3.6e-153 545.0 307 83.7
MD02G1007400 Malus domestica HOM05D005968 ORTHO05D007158 4.7e-153 544.7 311 82.0
arahy.Tifrunner.gnm1.ann1.D6JQQQ Arachis hypogaea HOM05D005968 ORTHO05D007158 6.2e-153 544.3 311 81.7
TAR626G1902 Trochodendron aralioides HOM05D005968 ORTHO05D007158 8.1e-153 543.9 304 82.6
Zm00001eb420110 Zea mays HOM05D005968 ORTHO05D007158 8.1e-153 543.9 306 79.7
Lsat_1_v5_gn_8_63401 Lactuca sativa HOM05D005968 ORTHO05D007158 5.2e-152 541.2 305 82.3
BolC1t00793H Brassica oleracea HOM05D005968 ORTHO05D007158 3.8e-150 535.0 308 81.2
Lj7A459G65 Lonicera japonica HOM05D005968 ORTHO05D007158 4.9e-150 534.6 308 80.8
A01p07280 Brassica napus HOM05D005968 ORTHO05D007158 6.4e-150 534.3 315 79.7
BraA01t00677Z Brassica rapa HOM05D005968 ORTHO05D007158 6.4e-150 534.3 315 79.7
BcaC09g51877 Brassica carinata HOM05D005968 ORTHO05D007158 8.4e-150 533.9 308 80.8
C01p08040 Brassica napus HOM05D005968 ORTHO05D007158 7.1e-149 530.8 308 80.5
BcaNung03430 Brassica carinata HOM05D005968 ORTHO05D007158 4.6e-148 528.1 303 79.5
Ca_21128_v3 Cicer arietinum L. HOM05D005968 ORTHO05D007158 4.6e-148 528.1 311 79.7
Psat0s2403g0360 Pisum sativum HOM05D005968 ORTHO05D007158 7.8e-148 527.3 301 81.1
Peaxi162Scf00401g00718 Petunia axillaris HOM05D005968 ORTHO05D007158 1.5e-146 523.1 311 79.7
Cfa020826 Carpinus fangiana HOM05D002374 ORTHO05D003594 3.3e-146 521.9 299 80.9
VMungo1215G2113 Vigna mungo HOM05D005968 ORTHO05D007158 7.6e-143 510.8 307 76.9
SEGI_19747 Sequoiadendron giganteum HOM05D005968 ORTHO05D007158 9.9e-143 510.4 308 76.0
Sabra18G0090900 Salix brachista HOM05D005968 ORTHO05D007158 1.1e-141 506.9 364 67.6
Sabra06G0140100 Salix brachista HOM05D005968 ORTHO05D007158 1.4e-141 506.5 406 63.5
PGR102G1528 Punica granatum HOM05D005968 ORTHO05D007158 3.2e-141 505.4 263 88.6
Actinidia38673 Actinidia chinensis HOM05D005968 ORTHO05D007158 1.6e-140 503.1 271 85.2
Phvul.003G156000 Phaseolus vulgaris HOM05D005968 ORTHO05D007158 1.3e-139 500.0 280 81.1
COL.COLO4_18810 Corchorus olitorius HOM05D000238 ORTHO05D007158 2.2e-134 482.6 293 77.8
unitig_52.g17565 Utricularia gibba HOM05D005968 ORTHO05D007158 1.9e-130 469.5 326 69.6
AUR62029822 Chenopodium quinoa HOM05D005968 ORTHO05D007158 1.8e-128 463.0 261 82.4
ATR0739G020 Amborella trichopoda HOM05D005968 ORTHO05D007158 2.6e-127 459.1 303 71.3
Mapoly0088s0077 Marchantia polymorpha HOM05D005968 ORTHO05D007158 3.5e-124 448.7 303 66.0
TWI34G0179 Tripterygium wilfordii HOM05D005968 ORTHO05D007158 6.0e-124 448.0 305 70.2
AUR62006466 Chenopodium quinoa HOM05D005968 ORTHO05D007158 1.6e-121 439.9 247 82.2
CsaV3_1G028970 Cucumis sativus L. HOM05D005968 ORTHO05D007158 1.8e-120 436.4 307 68.1
SGA_v2.0_scaffold347G49545 Striga asiatica HOM05D005968 ORTHO05D007158 1.7e-110 403.3 342 60.5
Nitab4.5_0003623g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 3.6e-100 369.0 311 62.7
Nitab4.5_0009876g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 1.7e-97 360.1 188 87.8
Lsat_1_v5_gn_7_66900 Lactuca sativa HOM05D005968 ORTHO05D007158 1.3e-94 350.5 269 64.3
CiPaw.15G168700 Carya illinoinensis HOM05D005968 ORTHO05D007158 5.3e-88 328.6 186 83.9
Cc06_g14950 Coffea canephora HOM05D005968 ORTHO05D007158 1.7e-86 323.6 168 87.5
Oeu038140.1 Olea europaea HOM05D005968 ORTHO05D007158 7.2e-85 318.2 165 86.7
Lalb_Chr12g0198711 Lupinus albus HOM05D005968 ORTHO05D007158 9.4e-85 317.8 168 84.5
CAN.G160.61 Capsicum annuum HOM05D005968 ORTHO05D007158 1.2e-84 317.4 168 86.9
Eucgr.C02540 Eucalyptus grandis HOM05D005968 ORTHO05D007158 2.1e-84 316.6 168 83.9
Sopen07g001720 Solanum pennellii HOM05D005968 ORTHO05D007158 2.1e-84 316.6 165 87.9
FAN28G0447 Fragaria x ananassa HOM05D005968 ORTHO05D007158 3.6e-84 315.8 168 86.3
RcHm_v2.0_Chr2g0085611 Rosa chinensis HOM05D005968 ORTHO05D007158 4.7e-84 315.5 168 85.1
GSVIVG01023606001 Vitis vinifera HOM05D005968 ORTHO05D007158 4.7e-84 315.5 168 83.9
Lsat_1_v5_gn_4_18721 Lactuca sativa HOM05D005968 ORTHO05D007158 6.1e-84 315.1 179 79.3
TPR.G24830 Trifolium pratense HOM05D005968 ORTHO05D007158 1.0e-83 314.3 168 83.9
Cpa.g.sc46.157 Carica papaya HOM05D005968 ORTHO05D007158 2.3e-83 313.2 163 85.9
MSTRG.26272 Avicennia marina HOM05D005968 ORTHO05D007158 4.0e-83 312.4 165 84.8
Medtr4g130830 Medicago truncatula HOM05D005968 ORTHO05D007158 1.2e-82 310.8 168 83.9
Sc17g0006690 Simmondsia chinensis HOM05D005968 ORTHO05D007158 1.5e-82 310.5 160 87.5
AagrBONN_evm.TU.Sc2ySwM_362.192 Anthoceros agrestis HOM05D005968 ORTHO05D007158 2.2e-78 296.6 244 55.3
vmacro06082 Vaccinium macrocarpon HOM05D005968 ORTHO05D007158 4.7e-76 288.9 185 73.5
Haze_19205 Corylus avellana HOM05D005968 ORTHO05D007158 1.6e-68 263.8 144 82.6
Cc06_g14960 Coffea canephora HOM05D005968 ORTHO05D007158 6.8e-59 231.9 122 87.7
Dinv43246 Davidia involucrata HOM05D005968 ORTHO05D007158 6.8e-59 231.9 122 89.3
Sopen07g001730 Solanum pennellii HOM05D005968 ORTHO05D007158 1.2e-58 231.1 122 86.9
Lalb_Chr12g0198701 Lupinus albus HOM05D005968 ORTHO05D007158 2.0e-58 230.3 122 86.1
Solyc07g005620.2 Solanum lycopersicum HOM05D005968 ORTHO05D007158 2.6e-58 229.9 122 86.1
RcHm_v2.0_Chr2g0085621 Rosa chinensis HOM05D005968 ORTHO05D007158 4.4e-58 229.2 122 86.1
TPR.G24874 Trifolium pratense HOM05D005968 ORTHO05D007158 9.8e-58 228.0 122 83.6
Medtr4g130840 Medicago truncatula HOM05D005968 ORTHO05D007158 6.4e-57 225.3 122 82.8
GSVIVG01023605001 Vitis vinifera HOM05D005968 ORTHO05D007158 8.3e-57 224.9 122 85.2
Oeu038141.1 Olea europaea HOM05D005968 ORTHO05D007158 9.2e-56 221.5 122 82.0
ClCG06G012410 Citrullus lanatus HOM05D005968 ORTHO05D007158 1.0e-54 218.0 122 82.8
RhsimUnG0158300 Rhododendron simsii HOM05D005968 ORTHO05D001263 5.0e-54 215.7 122 77.9
MELO3C010224.2 Cucumis melo HOM05D005968 ORTHO05D007158 6.6e-54 215.3 122 82.0
Os05g0279600 Oryza sativa ssp. japonica HOM05D005968 ORTHO05D007158 3.6e-52 209.5 124 75.8
HPP92_004698 Vanilla planifolia HOM05D005968 ORTHO05D007158 1.2e-50 204.5 123 78.9
TAR636G1721 Trochodendron aralioides HOM05D005968 ORTHO05D007158 1.3e-49 201.1 110 80.9
Aa31LG2G19470 Aethionema arabicum HOM05D005968 ORTHO05D007158 2.2e-49 200.3 117 77.8
Cpa.g.sc46.156 Carica papaya HOM05D005968 ORTHO05D007158 2.1e-47 193.7 142 68.3
HPP92_004697 Vanilla planifolia HOM05D005968 ORTHO05D007158 5.1e-46 189.1 101 83.2
CDE04G1812 Ceratophyllum demersum HOM05D005968 ORTHO05D007158 3.1e-35 153.3 89 74.2
arahy.Tifrunner.gnm1.ann1.HW7BNQ Arachis hypogaea HOM05D005968 ORTHO05D007158 2.7e-31 140.2 69 92.8
arahy.Tifrunner.gnm1.ann1.4WLG0J Arachis hypogaea HOM05D005968 ORTHO05D007158 1.0e-30 138.3 243 34.2
Lsat_1_v5_gn_4_18741 Lactuca sativa HOM05D005968 ORTHO05D007158 1.3e-30 137.9 78 78.2
TAR636G0142 Trochodendron aralioides HOM05D002374 ORTHO05D003594 2.1e-28 130.6 71 83.1
Nitab4.5_0006121g0010 Nicotiana tabacum HOM05D005968 ORTHO05D007158 5.8e-26 122.5 66 86.4
Eucgr.C02541 Eucalyptus grandis HOM05D005968 ORTHO05D007158 3.0e-22 110.2 71 74.6
SHI23672 Sapria himalayana HOM05D005968 ORTHO05D007158 3.5e-15 86.7 66 62.1
arahy.Tifrunner.gnm1.ann1.QXT71M Arachis hypogaea HOM05D005968 ORTHO05D007158 2.8e-12 77.0 46 76.1
Haze_19213 Corylus avellana HOM05D000344 ORTHO05D005296 2.4e-11 73.9 34 91.2
arahy.Tifrunner.gnm1.ann1.VCSM30 Arachis hypogaea HOM05D005968 ORTHO05D007158 3.1e-11 73.6 47 72.3
arahy.Tifrunner.gnm1.ann1.HGKJ8P Arachis hypogaea HOM05D005968 ORTHO05D007158 7.6e-10 68.9 40 80.0
Oeu038782.2 Olea europaea HOM05D005968 ORTHO05D007158 3.2e-08 63.5 56 57.1


User provided reference genes

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