Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_019356 Daucus carota HOM05D002693 ORTHO05D008074 1.8e-75 285.8 138 100.0
DCAR_016425 Daucus carota HOM05D002693 ORTHO05D008074 4.7e-20 101.7 51 96.1
GSVIVG01007572001 Vitis vinifera HOM05D002693 ORTHO05D008074 8.9e-19 97.4 51 92.2
CANSAT80G0417 Cannabis sativa HOM05D002693 ORTHO05D008074 2.6e-18 95.9 51 90.2
Dinv38484 Davidia involucrata HOM05D002693 ORTHO05D008074 2.6e-18 95.9 51 90.2
Cc04_g10650 Coffea canephora HOM05D002693 ORTHO05D008074 3.4e-18 95.5 51 90.2
Lsat_1_v5_gn_5_13101 Lactuca sativa HOM05D002693 ORTHO05D008074 3.4e-18 95.5 62 72.6
Actinidia36776 Actinidia chinensis HOM05D002693 ORTHO05D008074 4.4e-18 95.1 51 90.2
CSS0044980 Camellia sinensis var. sinensis HOM05D002693 ORTHO05D008074 4.4e-18 95.1 51 90.2
Nn4g22488 Nelumbo nucifera HOM05D002693 ORTHO05D008074 4.4e-18 95.1 51 88.2
Eucgr.K02765 Eucalyptus grandis HOM05D002693 ORTHO05D008074 5.8e-18 94.7 51 90.2
Potri.015G088500 Populus trichocarpa HOM05D002693 ORTHO05D008074 5.8e-18 94.7 51 88.2
QL10p005573 Quercus lobata HOM05D002693 ORTHO05D008074 5.8e-18 94.7 51 88.2
Rhsim12G0171100 Rhododendron simsii HOM05D002693 ORTHO05D008074 5.8e-18 94.7 56 82.1
Sabra15G0111400 Salix brachista HOM05D002693 ORTHO05D008074 5.8e-18 94.7 51 88.2
MD14G1165800 Malus domestica HOM05D002693 ORTHO05D008074 7.5e-18 94.4 51 90.2
Manes.06G113900 Manihot esculenta HOM05D002693 ORTHO05D008074 7.5e-18 94.4 51 88.2
RcHm_v2.0_Chr7g0191481 Rosa chinensis HOM05D002693 ORTHO05D008074 7.5e-18 94.4 51 90.2
vmacro16697 Vaccinium macrocarpon HOM05D002693 ORTHO05D008074 9.8e-18 94.0 51 88.2
Cfa018903 Carpinus fangiana HOM05D002693 ORTHO05D008074 1.3e-17 93.6 51 88.2
CiPaw.11G013400 Carya illinoinensis HOM05D002693 ORTHO05D008074 1.3e-17 93.6 51 86.3
Haze_07289 Corylus avellana HOM05D005390 ORTHO05D007086 1.3e-17 93.6 51 88.2
PGR044G0360 Punica granatum HOM05D002693 ORTHO05D008074 1.3e-17 93.6 51 86.3
Aqoxy3G01325 Aquilegia oxysepala HOM05D002693 ORTHO05D008074 1.7e-17 93.2 51 88.2
FAN08G3291 Fragaria x ananassa HOM05D002693 ORTHO05D008074 1.7e-17 93.2 51 88.2
TAR622G1430 Trochodendron aralioides HOM05D002693 ORTHO05D008074 1.7e-17 93.2 51 88.2
DCAR_009115 Daucus carota HOM05D002693 ORTHO05D008074 2.2e-17 92.8 96 54.2
DCAR_013582 Daucus carota HOM05D002693 ORTHO05D008074 2.2e-17 92.8 51 88.2
FvH4_5g07070 Fragaria vesca HOM05D002693 ORTHO05D008074 2.2e-17 92.8 51 88.2
FAN04G2647 Fragaria x ananassa HOM05D002693 ORTHO05D008074 2.2e-17 92.8 51 88.2
FAN13G1374 Fragaria x ananassa HOM05D002693 ORTHO05D008074 2.2e-17 92.8 51 88.2
FAN18G1738 Fragaria x ananassa HOM05D002693 ORTHO05D008074 2.2e-17 92.8 51 88.2
MSTRG.11525 Avicennia marina HOM05D002693 ORTHO05D008074 2.9e-17 92.4 51 84.3
Lj5A101T102 Lonicera japonica HOM05D002693 ORTHO05D008074 2.9e-17 92.4 50 88.0
Prupe.5G159800 Prunus persica HOM05D002693 ORTHO05D008074 2.9e-17 92.4 51 88.2
unitig_0.g1407 Utricularia gibba HOM05D002693 ORTHO05D008074 3.7e-17 92.0 51 84.3
Duzib205G0413 Durio zibethinus HOM05D002693 ORTHO05D008074 4.9e-17 91.7 51 84.3
Gohir.D09G245600 Gossypium hirsutum HOM05D002693 ORTHO05D008074 4.9e-17 91.7 51 84.3
Oeu053509.1 Olea europaea HOM05D002693 ORTHO05D008074 4.9e-17 91.7 51 86.3
SGA_v2.0_scaffold90G27784 Striga asiatica HOM05D002693 ORTHO05D008074 4.9e-17 91.7 51 84.3
Thecc.03G121000 Theobroma cacao HOM05D002693 ORTHO05D008074 4.9e-17 91.7 51 84.3
ECA246G3621 Erigeron canadensis HOM05D002693 ORTHO05D008074 6.4e-17 91.3 51 84.3
PSO017G1659 Papaver somniferum HOM05D002693 ORTHO05D008074 6.4e-17 91.3 51 86.3
PSO478G4803 Papaver somniferum HOM05D002693 ORTHO05D008074 6.4e-17 91.3 51 86.3
TWI23G0591 Tripterygium wilfordii HOM05D002693 ORTHO05D008074 6.4e-17 91.3 51 84.3
MBI08_g18358_MAGBIO Magnolia biondii HOM05D002693 ORTHO05D008074 8.3e-17 90.9 51 82.4
Solyc03g111610.3 Solanum lycopersicum HOM05D002693 ORTHO05D008074 8.3e-17 90.9 51 84.3
Sopen03g030730 Solanum pennellii HOM05D002693 ORTHO05D008074 8.3e-17 90.9 51 84.3
PGSC0003DMG400015165 Solanum tuberosum HOM05D002693 ORTHO05D008074 8.3e-17 90.9 51 84.3
ATR0824G037 Amborella trichopoda HOM05D002693 ORTHO05D008074 1.1e-16 90.5 51 84.3
HanXRQChr05g0156121 Helianthus annuus HOM05D002693 ORTHO05D008074 1.1e-16 90.5 51 84.3
Hund18531 Selenicereus undatus HOM05D002693 ORTHO05D008074 1.1e-16 90.5 51 84.3
HPP92_010508 Vanilla planifolia HOM05D002693 ORTHO05D008074 1.1e-16 90.5 51 82.4
Gohir.A09G244700 Gossypium hirsutum HOM05D002693 ORTHO05D008074 1.4e-16 90.1 51 84.3
Gorai.006G270000 Gossypium raimondii HOM05D002693 ORTHO05D008074 1.4e-16 90.1 51 84.3
COL.COLO4_04553 Corchorus olitorius HOM05D002693 ORTHO05D008074 1.9e-16 89.7 51 82.4
Migut.O00226 Erythranthe guttata HOM05D002693 ORTHO05D008074 1.9e-16 89.7 51 84.3
Peaxi162Scf00089g00838 Petunia axillaris HOM05D002693 ORTHO05D008074 1.9e-16 89.7 51 82.4
Psat5g139480 Pisum sativum HOM05D005390 ORTHO05D007086 1.9e-16 89.7 51 84.3
BcaNung06062 Brassica carinata HOM05D002693 ORTHO05D008074 2.4e-16 89.4 54 79.6
CAN.G472.45 Capsicum annuum HOM05D002693 ORTHO05D008074 2.4e-16 89.4 51 82.4
SalBow5G1929 Salvia bowleyana HOM05D002693 ORTHO05D008074 2.4e-16 89.4 51 82.4
Ciclev10020897m.g Citrus clementina HOM05D002693 ORTHO05D008074 3.2e-16 89.0 51 84.3
AT3G48420 Arabidopsis thaliana HOM05D002693 ORTHO05D008074 4.1e-16 88.6 51 82.4
Nitab4.5_0002531g0130 Nicotiana tabacum HOM05D002693 ORTHO05D008074 4.1e-16 88.6 51 82.4
Prupe.5G159700 Prunus persica HOM05D002693 ORTHO05D008074 4.1e-16 88.6 51 82.4
arahy.Tifrunner.gnm1.ann1.V8X883 Arachis hypogaea HOM05D005390 ORTHO05D007086 5.4e-16 88.2 51 82.4
BcaB01g00815 Brassica carinata HOM05D002693 ORTHO05D008074 5.4e-16 88.2 51 82.4
C08p23410 Brassica napus HOM05D002693 ORTHO05D008074 5.4e-16 88.2 51 82.4
BolC8t49969H Brassica oleracea HOM05D002693 ORTHO05D008074 5.4e-16 88.2 51 82.4
CDE06G2530 Ceratophyllum demersum HOM05D002693 ORTHO05D008074 5.4e-16 88.2 51 80.4
Ca_16101_v3 Cicer arietinum L. HOM05D005390 ORTHO05D007086 5.4e-16 88.2 51 82.4
Ca_30077_v3 Cicer arietinum L. HOM05D005390 ORTHO05D007086 5.4e-16 88.2 51 82.4
arahy.Tifrunner.gnm1.ann1.3ZI7DD Arachis hypogaea HOM05D002693 ORTHO05D008074 7.0e-16 87.8 51 82.4
Nitab4.5_0001360g0120 Nicotiana tabacum HOM05D002693 ORTHO05D008074 7.0e-16 87.8 51 82.4
Sc22g0003900 Simmondsia chinensis HOM05D002693 ORTHO05D008074 7.0e-16 87.8 51 80.4
Carub.0005s1458 Capsella rubella HOM05D002693 ORTHO05D008074 9.2e-16 87.4 51 80.4
EL10Ac7g18055 Beta vulgaris HOM05D002693 ORTHO05D008074 1.2e-15 87.0 51 78.4
BcaC01g02341 Brassica carinata HOM05D002693 ORTHO05D008074 1.2e-15 87.0 51 82.4
BcaC07g39324 Brassica carinata HOM05D002693 ORTHO05D008074 1.2e-15 87.0 51 82.4
C03p66400 Brassica napus HOM05D002693 ORTHO05D008074 1.2e-15 87.0 51 82.4
BolC3t18913H Brassica oleracea HOM05D002693 ORTHO05D008074 1.2e-15 87.0 51 82.4
BraA06t25011Z Brassica rapa HOM05D002693 ORTHO05D008074 1.2e-15 87.0 51 82.4
MD06G1160600 Malus domestica HOM05D002693 ORTHO05D008074 1.2e-15 87.0 51 80.4
Medtr3g075230 Medicago truncatula HOM05D002693 ORTHO05D008074 1.2e-15 87.0 51 80.4
TPR.G38598 Trifolium pratense HOM05D002693 ORTHO05D008074 1.2e-15 87.0 51 80.4
TWI09G0096 Tripterygium wilfordii HOM05D002693 ORTHO05D008074 1.2e-15 87.0 53 79.2
Zm00001eb113090 Zea mays HOM05D002693 ORTHO05D008074 1.2e-15 87.0 51 78.4
Aa31LG4G16990 Aethionema arabicum HOM05D002693 ORTHO05D008074 1.6e-15 86.7 51 80.4
Ah.15g095420 Amaranthus hybridus HOM05D002693 ORTHO05D008074 1.6e-15 86.7 51 78.4
Thhalv10010540m.g Eutrema salsugineum HOM05D002693 ORTHO05D008074 1.6e-15 86.7 51 82.4
Sp5g13640 Schrenkiella parvula HOM05D002693 ORTHO05D008074 1.6e-15 86.7 51 82.4
Os03g0565200 Oryza sativa ssp. japonica HOM05D002693 ORTHO05D008074 2.7e-15 85.9 51 78.4
MELO3C026235.2 Cucumis melo HOM05D002693 ORTHO05D008074 3.5e-15 85.5 51 78.4
CsaV3_1G000830 Cucumis sativus L. HOM05D002693 ORTHO05D008074 3.5e-15 85.5 51 78.4
THA.LOC104821498 Tarenaya hassleriana HOM05D002693 ORTHO05D008074 3.5e-15 85.5 51 78.4
A06p19280 Brassica napus HOM05D002693 ORTHO05D008074 4.6e-15 85.1 51 80.4
AUR62025747 Chenopodium quinoa HOM05D002693 ORTHO05D008074 4.6e-15 85.1 51 76.5
Lj1g0007454 Lotus japonicus HOM05D002693 ORTHO05D008074 4.6e-15 85.1 51 76.5
Phvul.009G169900 Phaseolus vulgaris HOM05D002693 ORTHO05D008074 6.0e-15 84.7 51 76.5
VMungo1309G0913 Vigna mungo HOM05D002693 ORTHO05D008074 6.0e-15 84.7 51 76.5
ClCG06G017610 Citrullus lanatus HOM05D002693 ORTHO05D008074 7.8e-15 84.3 51 76.5
Sed0019566 Sechium edule HOM05D002693 ORTHO05D008074 1.0e-14 84.0 51 76.5
AUR62001263 Chenopodium quinoa HOM05D002693 ORTHO05D008074 1.3e-14 83.6 50 76.0
A06p27660 Brassica napus HOM05D002693 ORTHO05D008074 1.7e-14 83.2 51 78.4
Glyma.04G191700 Glycine max HOM05D002693 ORTHO05D008074 1.7e-14 83.2 51 76.5
Glyma.06G174200 Glycine max HOM05D002693 ORTHO05D008074 1.7e-14 83.2 51 76.5
Lalb_Chr11g0069751 Lupinus albus HOM05D002693 ORTHO05D008074 1.7e-14 83.2 51 78.4
SEGI_18096 Sequoiadendron giganteum HOM05D002693 ORTHO05D008074 1.7e-14 83.2 51 76.5
SGA_v2.0_scaffold237G43872 Striga asiatica HOM05D002693 ORTHO05D008074 3.3e-13 79.0 51 74.5
SMO367G1130 Selaginella moellendorffii HOM05D002693 ORTHO05D008074 3.1e-11 72.4 51 66.7
Mapoly0082s0060 Marchantia polymorpha HOM05D002693 ORTHO05D008074 8.9e-11 70.9 53 62.3
AagrBONN_evm.TU.Sc2ySwM_362.2434 Anthoceros agrestis HOM05D002693 ORTHO05D008074 9.8e-10 67.4 51 64.7
CBR_g22462 Chara braunii HOM05D002693 ORTHO05D008074 8.3e-09 64.3 51 56.9
Pp3c10_2693 Physcomitrium patens HOM05D002693 ORTHO05D008074 5.4e-08 61.6 53 58.5
BcaB01g00813 Brassica carinata HOM05D002693 ORTHO05D008074 1.7e-06 56.6 35 74.3


User provided reference genes

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