Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_019346 Daucus carota HOM05D005471 ORTHO05D006170 5.2e-229 797.3 399 100.0
Dinv44934 Davidia involucrata HOM05D005471 ORTHO05D006170 4.7e-129 465.3 393 62.3
Hma1.2p1_1170F.1_g263420 Hydrangea macrophylla HOM05D005471 ORTHO05D006170 1.8e-128 463.4 394 62.4
Atru.chr13.864 Acer truncatum HOM05D005471 ORTHO05D006170 2.3e-128 463.0 393 62.1
Manes.18G048900 Manihot esculenta HOM05D005471 ORTHO05D006170 2.3e-128 463.0 392 62.2
Dinv39207 Davidia involucrata HOM05D005471 ORTHO05D006170 5.2e-128 461.8 384 63.3
GSVIVG01009307001 Vitis vinifera HOM05D005471 ORTHO05D006170 2.6e-127 459.5 394 61.4
Ciclev10001411m.g Citrus clementina HOM05D005471 ORTHO05D006170 4.9e-126 455.3 393 61.8
arahy.Tifrunner.gnm1.ann1.F72CPE Arachis hypogaea HOM05D005471 ORTHO05D006170 1.1e-125 454.1 385 63.1
CSS0040686 Camellia sinensis var. sinensis HOM05D005471 ORTHO05D006170 1.4e-125 453.8 394 61.4
Rhsim06G0064300 Rhododendron simsii HOM05D005471 ORTHO05D006170 2.4e-125 453.0 392 61.2
TPR.G30210 Trifolium pratense HOM05D005471 ORTHO05D006170 1.0e-123 447.6 393 61.1
MELO3C010789.2 Cucumis melo HOM05D005471 ORTHO05D006170 2.9e-123 446.0 392 60.5
Glyma.06G048400 Glycine max HOM05D005471 ORTHO05D006170 6.6e-123 444.9 393 60.1
Thecc.08G085200 Theobroma cacao HOM05D005471 ORTHO05D006170 8.6e-123 444.5 393 61.8
Medtr3g103350 Medicago truncatula HOM05D005471 ORTHO05D006170 1.1e-122 444.1 393 60.8
arahy.Tifrunner.gnm1.ann1.P8GEK4 Arachis hypogaea HOM05D005471 ORTHO05D006170 1.9e-122 443.4 411 58.4
CSS0038926 Camellia sinensis var. sinensis HOM05D005471 ORTHO05D006170 7.2e-122 441.4 422 57.8
COL.COLO4_28470 Corchorus olitorius HOM05D005471 ORTHO05D006170 9.5e-122 441.0 395 61.5
Prupe.1G419800 Prunus persica HOM05D005471 ORTHO05D006170 3.6e-121 439.1 393 61.1
Sed0019663 Sechium edule HOM05D005471 ORTHO05D006170 3.6e-121 439.1 392 59.4
CsaV3_2G025960 Cucumis sativus L. HOM05D005471 ORTHO05D006170 6.1e-121 438.3 392 59.4
Lalb_Chr11g0063001 Lupinus albus HOM05D005471 ORTHO05D006170 6.1e-121 438.3 391 59.1
TWI12G0997 Tripterygium wilfordii HOM05D005471 ORTHO05D006170 1.4e-120 437.2 395 61.3
Nn5g30656 Nelumbo nucifera HOM05D005471 ORTHO05D006170 2.3e-120 436.4 393 59.0
Migut.C00408 Erythranthe guttata HOM05D005471 ORTHO05D006170 3.0e-120 436.0 394 58.1
Lj1g0028245 Lotus japonicus HOM05D005471 ORTHO05D006170 3.0e-120 436.0 394 59.6
HanXRQChr15g0493081 Helianthus annuus HOM05D005471 ORTHO05D006170 4.0e-120 435.6 395 58.5
Sc02g0008090 Simmondsia chinensis HOM05D005471 ORTHO05D006170 5.2e-120 435.3 396 58.8
Cc10_g07570 Coffea canephora HOM05D005471 ORTHO05D006170 6.8e-120 434.9 394 59.9
SGA_v2.0_scaffold74G24542 Striga asiatica HOM05D005471 ORTHO05D006170 6.8e-120 434.9 398 59.0
MSTRG.25028 Avicennia marina HOM05D005471 ORTHO05D006170 8.9e-120 434.5 395 58.7
Phvul.009G073700 Phaseolus vulgaris HOM05D005471 ORTHO05D006170 8.9e-120 434.5 393 58.8
MD08G1078900 Malus domestica HOM05D005471 ORTHO05D006170 1.5e-119 433.7 395 60.0
HanXRQChr09g0254061 Helianthus annuus HOM05D005471 ORTHO05D006170 2.0e-119 433.3 394 57.4
Lalb_Chr08g0245201 Lupinus albus HOM05D005471 ORTHO05D006170 2.0e-119 433.3 393 58.8
Gohir.D06G022300 Gossypium hirsutum HOM05D005471 ORTHO05D006170 4.4e-119 432.2 393 60.1
Gorai.010G026900 Gossypium raimondii HOM05D005471 ORTHO05D006170 4.4e-119 432.2 393 60.1
Cfa013748 Carpinus fangiana HOM05D005471 ORTHO05D006170 5.7e-119 431.8 409 59.7
ClCG08G016670 Citrullus lanatus HOM05D005471 ORTHO05D006170 5.7e-119 431.8 396 58.6
MD15G1065900 Malus domestica HOM05D005471 ORTHO05D006170 7.5e-119 431.4 395 60.0
Manes.05G183100 Manihot esculenta HOM05D005471 ORTHO05D006170 1.7e-118 430.3 393 60.3
Sabra14G0008300 Salix brachista HOM05D005471 ORTHO05D006170 2.2e-118 429.9 420 56.0
CiPaw.07G172600 Carya illinoinensis HOM05D005471 ORTHO05D006170 2.9e-118 429.5 410 59.0
CSS0014765 Camellia sinensis var. sinensis HOM05D005471 ORTHO05D006170 8.3e-118 427.9 393 59.0
Gohir.A06G025200 Gossypium hirsutum HOM05D005471 ORTHO05D006170 1.4e-117 427.2 393 59.5
ECA232G3342 Erigeron canadensis HOM05D005471 ORTHO05D006170 5.4e-117 425.2 394 57.6
Psat5g045040 Pisum sativum HOM05D005471 ORTHO05D006170 1.6e-116 423.7 394 59.1
Sp2g05030 Schrenkiella parvula HOM05D005471 ORTHO05D006170 2.0e-116 423.3 392 57.4
FAN20G2694 Fragaria x ananassa HOM05D005471 ORTHO05D006170 7.8e-116 421.4 396 58.8
AT1G59520 Arabidopsis thaliana HOM05D005471 ORTHO05D006170 1.0e-115 421.0 392 57.1
Eucgr.F02230 Eucalyptus grandis HOM05D005471 ORTHO05D006170 1.3e-115 420.6 396 57.1
PGSC0003DMG400004915 Solanum tuberosum HOM05D005471 ORTHO05D006170 1.3e-115 420.6 391 58.3
FAN15G0642 Fragaria x ananassa HOM05D005471 ORTHO05D006170 2.3e-115 419.9 396 58.6
Solyc04g077560.3 Solanum lycopersicum HOM05D005471 ORTHO05D006170 5.0e-115 418.7 391 58.1
Sopen04g031200 Solanum pennellii HOM05D005471 ORTHO05D006170 5.0e-115 418.7 391 58.1
FvH4_2g32730 Fragaria vesca HOM05D005471 ORTHO05D006170 8.6e-115 417.9 393 58.8
Aqoxy6G02473 Aquilegia oxysepala HOM05D005471 ORTHO05D006170 1.1e-114 417.5 392 57.9
C01p36310 Brassica napus HOM05D005471 ORTHO05D006170 1.1e-114 417.5 394 55.8
BolC1t03588H Brassica oleracea HOM05D005471 ORTHO05D006170 1.5e-114 417.2 399 55.4
BcaC09g49476 Brassica carinata HOM05D005471 ORTHO05D006170 2.5e-114 416.4 392 55.9
A01p28660 Brassica napus HOM05D005471 ORTHO05D006170 2.5e-114 416.4 392 56.1
FAN24G0217 Fragaria x ananassa HOM05D005471 ORTHO05D006170 2.5e-114 416.4 396 58.1
BraA01t03038Z Brassica rapa HOM05D005471 ORTHO05D006170 3.3e-114 416.0 399 55.4
CARHR283850 Cardamine hirsuta HOM05D005471 ORTHO05D006170 5.6e-114 415.2 392 56.6
Carub.0002s0591 Capsella rubella HOM05D005471 ORTHO05D006170 9.5e-114 414.5 392 55.6
Gorai.009G221700 Gossypium raimondii HOM05D005471 ORTHO05D006170 1.6e-113 413.7 393 58.3
Gohir.D05G215000 Gossypium hirsutum HOM05D005471 ORTHO05D006170 3.6e-113 412.5 393 58.3
FAN27G0342 Fragaria x ananassa HOM05D005471 ORTHO05D006170 6.2e-113 411.8 410 56.6
CiPaw.08G051800 Carya illinoinensis HOM05D005471 ORTHO05D006170 2.6e-111 406.4 409 57.0
VMungo1309G2773 Vigna mungo HOM05D005471 ORTHO05D006170 7.5e-111 404.8 388 57.5
Ca_15890_v3 Cicer arietinum L. HOM05D005471 ORTHO05D006170 9.8e-111 404.4 388 58.0
Ah.05g166980 Amaranthus hybridus HOM05D005471 ORTHO05D006170 8.3e-110 401.4 398 55.8
Thhalv10023553m.g Eutrema salsugineum HOM05D005471 ORTHO05D006170 9.2e-109 397.9 392 53.1
ATR0739G016 Amborella trichopoda HOM05D005471 ORTHO05D006170 1.2e-108 397.5 391 56.0
RcHm_v2.0_Chr6g0309951 Rosa chinensis HOM05D005471 ORTHO05D006170 1.2e-108 397.5 394 56.6
THA.LOC104819922 Tarenaya hassleriana HOM05D005471 ORTHO05D006170 1.6e-108 397.1 395 53.4
PSO017G6379 Papaver somniferum HOM05D005471 ORTHO05D006170 6.0e-108 395.2 397 55.9
MBI16_g27035_MAGBIO Magnolia biondii HOM05D005471 ORTHO05D006170 1.0e-107 394.4 438 51.6
BcaC09g49477 Brassica carinata HOM05D005471 ORTHO05D006170 3.9e-107 392.5 382 55.8
unitig_37.g13113 Utricularia gibba HOM05D005471 ORTHO05D006170 9.5e-106 387.9 404 54.2
EL10Ac1g02354 Beta vulgaris HOM05D005471 ORTHO05D006170 2.1e-105 386.7 391 53.5
Gohir.A05G211700 Gossypium hirsutum HOM05D005471 ORTHO05D006170 6.2e-105 385.2 393 54.7
CDE02G4131 Ceratophyllum demersum HOM05D005471 ORTHO05D006170 1.1e-104 384.4 391 53.5
PSO675G5405 Papaver somniferum HOM05D005471 ORTHO05D006170 1.1e-104 384.4 390 53.8
PSO541G0412 Papaver somniferum HOM05D005471 ORTHO05D006170 2.3e-104 383.3 390 54.1
PSO170G6612 Papaver somniferum HOM05D005471 ORTHO05D006170 1.5e-103 380.6 395 54.4
Gohir.D06G026900 Gossypium hirsutum HOM05D005471 ORTHO05D006170 1.3e-102 377.5 350 60.3
HPP92_007709 Vanilla planifolia HOM05D005471 ORTHO05D006170 2.2e-102 376.7 390 53.3
Duzib093G1789 Durio zibethinus HOM05D005471 ORTHO05D006170 5.4e-101 372.1 393 54.2
Lj4A753G30 Lonicera japonica HOM05D005471 ORTHO05D006170 2.1e-100 370.2 368 54.6
Nitab4.5_0001426g0050 Nicotiana tabacum HOM05D005471 ORTHO05D006170 7.8e-100 368.2 429 49.4
Glyma.04G047500 Glycine max HOM05D005471 ORTHO05D006170 7.3e-98 361.7 393 51.9
Aa31LG2G10610 Aethionema arabicum HOM05D005471 ORTHO05D006170 2.1e-97 360.1 408 50.0
Lsat_1_v5_gn_2_90520 Lactuca sativa HOM05D005471 ORTHO05D006170 2.1e-97 360.1 392 51.0
Nitab4.5_0002796g0080 Nicotiana tabacum HOM05D005471 ORTHO05D006170 2.6e-95 353.2 399 50.4
Lsat_1_v5_gn_1_56140 Lactuca sativa HOM05D001400 ORTHO05D001795 1.1e-93 347.8 383 52.5
PGR031G3068 Punica granatum HOM05D005471 ORTHO05D006170 1.9e-93 347.1 384 50.5
BcaB04g20211 Brassica carinata HOM05D005471 ORTHO05D006170 1.6e-92 344.0 383 49.9
Os04g0183100 Oryza sativa ssp. japonica HOM05D005471 ORTHO05D006170 3.5e-92 342.8 394 48.5
Os10g0102900 Oryza sativa ssp. japonica HOM05D005471 ORTHO05D006170 6.0e-92 342.0 391 50.1
Os07g0248800 Oryza sativa ssp. japonica HOM05D005471 ORTHO05D006170 1.0e-91 341.3 391 50.4
Peaxi162Scf00340g00069 Petunia axillaris HOM05D005471 ORTHO05D006170 1.0e-91 341.3 425 46.8
TAR625G0189 Trochodendron aralioides HOM05D005471 ORTHO05D006170 1.0e-91 341.3 304 62.2
Potri.014G013500 Populus trichocarpa HOM05D005471 ORTHO05D006170 7.3e-90 335.1 283 60.1
Zm00001eb025640 Zea mays HOM05D005471 ORTHO05D006170 2.2e-86 323.6 393 46.8
AUR62035006 Chenopodium quinoa HOM05D005471 ORTHO05D006170 3.5e-84 316.2 404 47.0
Nitab4.5_0006888g0020 Nicotiana tabacum HOM05D005471 ORTHO05D006170 1.8e-80 303.9 414 45.2
QL12p038448 Quercus lobata HOM05D005471 ORTHO05D006170 4.0e-80 302.8 312 52.6
Mapoly0067s0099 Marchantia polymorpha HOM05D005471 ORTHO05D006170 2.1e-76 290.4 411 43.8
Pp3c17_20680 Physcomitrium patens HOM05D005471 ORTHO05D006170 1.1e-74 284.6 398 43.0
DCAR_020058 Daucus carota HOM05D005471 ORTHO05D006170 4.3e-74 282.7 232 60.3
vmacro21421 Vaccinium macrocarpon HOM05D005471 ORTHO05D006170 5.6e-74 282.3 285 53.0
Cpa.g.sc142.57 Carica papaya HOM05D005471 ORTHO05D006170 4.0e-72 276.2 309 50.8
AagrBONN_evm.TU.Sc2ySwM_368.1412 Anthoceros agrestis HOM05D005471 ORTHO05D006170 2.9e-70 270.0 398 43.0
CBR_g49495 Chara braunii HOM05D005471 ORTHO05D006170 1.9e-69 267.3 422 40.8
SMO117G0302 Selaginella moellendorffii HOM05D005471 ORTHO05D006170 5.8e-63 245.7 392 39.8
AUR62037460 Chenopodium quinoa HOM05D005471 ORTHO05D006170 4.2e-45 186.4 253 42.7
Psat5g037200 Pisum sativum HOM05D005471 ORTHO05D006170 1.8e-43 181.0 160 55.6
Haze_22399 Corylus avellana HOM05D005471 ORTHO05D006170 8.5e-38 162.2 349 37.2
Haze_22407 Corylus avellana HOM05D005471 ORTHO05D006170 2.5e-37 160.6 358 35.8
vmacro21420 Vaccinium macrocarpon HOM05D005471 ORTHO05D006170 2.3e-35 154.1 151 57.6
Gohir.D04G027975 Gossypium hirsutum HOM05D005471 ORTHO05D006170 1.7e-30 137.9 110 63.6
Gohir.D12G192766 Gossypium hirsutum HOM05D005471 ORTHO05D006170 5.0e-30 136.3 120 60.8
Gorai.012G030800 Gossypium raimondii HOM05D005471 ORTHO05D006170 5.0e-30 136.3 110 62.7
Gohir.A12G016250 Gossypium hirsutum HOM05D005471 ORTHO05D006170 2.1e-28 131.0 110 61.8
SHI08425 Sapria himalayana HOM05D005471 ORTHO05D006170 4.4e-26 123.2 127 53.5
DCAR_020059 Daucus carota HOM05D005471 ORTHO05D006170 1.3e-22 111.7 96 64.6
Hund05280 Selenicereus undatus HOM05D005471 ORTHO05D006170 1.5e-21 108.2 99 53.5
Peaxi162Scf00448g00027 Petunia axillaris HOM05D005471 ORTHO05D006170 4.7e-20 103.2 117 50.4
QL12p038454 Quercus lobata HOM05D005471 ORTHO05D006170 4.5e-15 86.7 110 51.8
Phvul.009G072300 Phaseolus vulgaris HOM05D005471 ORTHO05D000997 5.0e-14 83.2 147 38.8
Actinidia31832 Actinidia chinensis HOM05D006494 ORTHO05D007787 3.4e-10 70.5 60 56.7
Cpa.g.sc142.58 Carica papaya HOM05D005471 ORTHO05D006170 4.4e-10 70.1 62 64.5
SEGI_08278 Sequoiadendron giganteum HOM05D005471 ORTHO05D006170 9.8e-10 68.9 93 43.0
Cre07.g320250 Chlamydomonas reinhardtii HOM05D005471 ORTHO05D006170 2.2e-09 67.8 335 25.1
Gorai.001G227100 Gossypium raimondii HOM05D005471 ORTHO05D006170 2.4e-08 64.3 53 66.0
CAN.G213.23 Capsicum annuum HOM05D005471 ORTHO05D006170 5.9e-07 59.7 62 43.5


User provided reference genes

Program Settings