Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_019254 Daucus carota HOM05D000172 ORTHO05D008216 9.7e-77 290.0 144 100.0
CSS0028035 Camellia sinensis var. sinensis HOM05D000172 ORTHO05D000781 2.2e-36 156.0 125 62.4
Dinv39759 Davidia involucrata HOM05D000172 ORTHO05D008216 4.9e-36 154.8 123 61.8
Nitab4.5_0000130g0110 Nicotiana tabacum HOM05D000172 ORTHO05D008216 2.1e-34 149.4 125 60.8
Nitab4.5_0010117g0030 Nicotiana tabacum HOM05D000172 ORTHO05D008216 2.7e-34 149.1 125 60.8
Nn1g03358 Nelumbo nucifera HOM05D000172 ORTHO05D008216 6.0e-34 147.9 122 59.0
Actinidia13731 Actinidia chinensis HOM05D000172 ORTHO05D008216 7.8e-34 147.5 124 56.5
Hma1.2p1_2406F.1_g321460 Hydrangea macrophylla HOM05D000172 ORTHO05D008216 1.0e-33 147.1 107 65.4
HanXRQChr04g0126831 Helianthus annuus HOM05D000172 ORTHO05D008216 1.7e-33 146.4 128 54.7
Hma1.2p1_0405F.1_g145530 Hydrangea macrophylla HOM05D000172 ORTHO05D008216 1.7e-33 146.4 107 65.4
PGSC0003DMG400000660 Solanum tuberosum HOM05D000172 ORTHO05D008216 1.7e-33 146.4 130 57.7
TAR624G1331 Trochodendron aralioides HOM05D000172 ORTHO05D008216 3.0e-33 145.6 122 59.0
Peaxi162Scf01333g00137 Petunia axillaris HOM05D000172 ORTHO05D008216 5.1e-33 144.8 125 57.6
Sopen07g024820 Solanum pennellii HOM05D000172 ORTHO05D008216 5.1e-33 144.8 125 57.6
Ciclev10016727m.g Citrus clementina HOM05D000172 ORTHO05D008216 8.6e-33 144.1 125 56.0
Eucgr.K00733 Eucalyptus grandis HOM05D000172 ORTHO05D008216 8.6e-33 144.1 122 54.9
Sc12g0002040 Simmondsia chinensis HOM05D000172 ORTHO05D008216 8.6e-33 144.1 125 54.4
CAN.G784.10 Capsicum annuum HOM05D000172 ORTHO05D008216 3.3e-32 142.1 125 57.6
MBI16_g26181_MAGBIO Magnolia biondii HOM05D000172 ORTHO05D008216 1.2e-31 140.2 120 56.7
vmacro12154 Vaccinium macrocarpon HOM05D000172 ORTHO05D008216 1.2e-31 140.2 104 64.4
Lsat_1_v5_gn_7_94941 Lactuca sativa HOM05D000172 ORTHO05D008216 1.6e-31 139.8 125 52.8
Manes.13G066180 Manihot esculenta HOM05D000172 ORTHO05D008216 1.6e-31 139.8 122 54.9
Duzib138G0791 Durio zibethinus HOM05D000172 ORTHO05D000781 2.1e-31 139.4 125 52.0
COL.COLO4_06741 Corchorus olitorius HOM05D000172 ORTHO05D008216 3.6e-31 138.7 106 62.3
Thecc.01G183500 Theobroma cacao HOM05D000172 ORTHO05D008216 3.6e-31 138.7 125 52.0
GSVIVG01030516001 Vitis vinifera HOM05D000172 ORTHO05D008216 3.6e-31 138.7 139 48.2
CANSAT78G2170 Cannabis sativa HOM05D000172 ORTHO05D000781 6.2e-31 137.9 125 52.0
Gohir.D07G174800 Gossypium hirsutum HOM05D000172 ORTHO05D008216 6.2e-31 137.9 121 54.5
Gohir.A07G168450 Gossypium hirsutum HOM05D000172 ORTHO05D008216 8.1e-31 137.5 125 52.8
Potri.014G159600 Populus trichocarpa HOM05D000172 ORTHO05D008216 1.1e-30 137.1 104 62.5
Gorai.001G195500 Gossypium raimondii HOM05D000172 ORTHO05D008216 1.4e-30 136.7 125 52.0
Prupe.3G209000 Prunus persica HOM05D000172 ORTHO05D008216 3.1e-30 135.6 139 45.3
PSO210G7646 Papaver somniferum HOM05D000172 ORTHO05D008216 4.0e-30 135.2 106 61.3
AUR62015120 Chenopodium quinoa HOM05D000172 ORTHO05D008216 5.2e-30 134.8 104 60.6
Cpa.g.sc132.32 Carica papaya HOM05D000172 ORTHO05D008216 8.9e-30 134.0 107 57.9
Sabra14G0121300 Salix brachista HOM05D000172 ORTHO05D008216 1.2e-29 133.7 104 58.7
MSTRG.14128 Avicennia marina HOM05D000172 ORTHO05D008216 1.5e-29 133.3 118 56.8
EL10Ac9g22821 Beta vulgaris HOM05D000172 ORTHO05D008216 1.5e-29 133.3 125 52.8
Atru.chr6.3269 Acer truncatum HOM05D000172 ORTHO05D008216 2.0e-29 132.9 125 52.8
CDE04G1581 Ceratophyllum demersum HOM05D000172 ORTHO05D008216 2.0e-29 132.9 136 50.0
Rhsim06G0168800 Rhododendron simsii HOM05D000172 ORTHO05D008216 2.0e-29 132.9 117 57.3
Aqoxy1G04174 Aquilegia oxysepala HOM05D000172 ORTHO05D008216 3.4e-29 132.1 125 48.8
PGR142G2841 Punica granatum HOM05D000172 ORTHO05D008216 4.4e-29 131.7 134 47.0
Sed0000051 Sechium edule HOM05D000172 ORTHO05D008216 4.4e-29 131.7 125 48.8
ClCG02G018130 Citrullus lanatus HOM05D000172 ORTHO05D008216 5.8e-29 131.3 125 50.4
Cc05_g02620 Coffea canephora HOM05D000172 ORTHO05D008216 9.9e-29 130.6 125 51.2
PSO832G3827 Papaver somniferum HOM05D000172 ORTHO05D008216 1.7e-28 129.8 106 59.4
MELO3C019724.2 Cucumis melo HOM05D000172 ORTHO05D008216 3.8e-28 128.6 125 48.0
Sed0027341 Sechium edule HOM05D000172 ORTHO05D008216 3.8e-28 128.6 125 48.8
Cfa014307 Carpinus fangiana HOM05D000172 ORTHO05D008216 6.4e-28 127.9 110 50.0
MD17G1107300 Malus domestica HOM05D000172 ORTHO05D008216 6.4e-28 127.9 139 43.9
Glyma.02G267200 Glycine max HOM05D000172 ORTHO05D008216 1.4e-27 126.7 106 58.5
SEGI_13182 Sequoiadendron giganteum HOM05D000172 ORTHO05D008216 1.4e-27 126.7 114 50.0
Phvul.008G214900 Phaseolus vulgaris HOM05D000172 ORTHO05D008216 1.9e-27 126.3 112 56.2
RcHm_v2.0_Chr2g0157891 Rosa chinensis HOM05D000172 ORTHO05D008216 1.9e-27 126.3 106 51.9
CsaV3_6G015520 Cucumis sativus L. HOM05D000172 ORTHO05D008216 2.4e-27 125.9 125 48.0
ATR1128G110 Amborella trichopoda HOM05D000172 ORTHO05D008216 3.2e-27 125.6 122 49.2
Atru.chr6.3270 Acer truncatum HOM05D000172 ORTHO05D008216 5.4e-27 124.8 125 51.2
TWI36G0853 Tripterygium wilfordii HOM05D000172 ORTHO05D000781 5.4e-27 124.8 125 49.6
MD09G1115500 Malus domestica HOM05D000172 ORTHO05D000781 7.1e-27 124.4 123 45.5
THA.LOC104826130 Tarenaya hassleriana HOM05D000172 ORTHO05D008216 9.2e-27 124.0 125 48.0
VMungo0647G0578 Vigna mungo HOM05D000172 ORTHO05D008216 9.2e-27 124.0 112 54.5
arahy.Tifrunner.gnm1.ann1.EDY71B Arachis hypogaea HOM05D000172 ORTHO05D008216 1.2e-26 123.6 106 51.9
SGA_v2.0_scaffold49G18358 Striga asiatica HOM05D000172 ORTHO05D008216 1.2e-26 123.6 107 57.0
DCAR_021133 Daucus carota HOM05D000172 ORTHO05D008216 1.6e-26 123.2 74 77.0
LjContig00029g0008644 Lotus japonicus HOM05D000172 ORTHO05D008216 1.6e-26 123.2 107 52.3
AL1G14720 Arabidopsis lyrata HOM05D000172 ORTHO05D008216 3.5e-26 122.1 125 48.0
FAN14G3302 Fragaria x ananassa HOM05D000172 ORTHO05D008216 6.0e-26 121.3 105 52.4
FAN14G3681 Fragaria x ananassa HOM05D000172 ORTHO05D008216 6.0e-26 121.3 105 52.4
Lalb_Chr17g0347191 Lupinus albus HOM05D000172 ORTHO05D008216 6.0e-26 121.3 108 50.9
HPP92_000210 Vanilla planifolia HOM05D000172 ORTHO05D008216 6.0e-26 121.3 134 44.0
Migut.H01248 Erythranthe guttata HOM05D000172 ORTHO05D008216 1.0e-25 120.6 107 59.8
Carub.0001s0423 Capsella rubella HOM05D000172 ORTHO05D008216 1.3e-25 120.2 125 47.2
FvH4_6g41990 Fragaria vesca HOM05D000172 ORTHO05D008216 1.3e-25 120.2 105 51.4
Psat2g026560 Pisum sativum HOM05D000172 ORTHO05D008216 1.7e-25 119.8 107 53.3
QL93p0185_0050 Quercus lobata HOM05D000172 ORTHO05D008216 1.7e-25 119.8 104 48.1
HPP92_000219 Vanilla planifolia HOM05D000172 ORTHO05D008216 1.7e-25 119.8 134 43.3
SalBow1G7277 Salvia bowleyana HOM05D000172 ORTHO05D008216 3.9e-25 118.6 136 47.1
Zm00001eb433230 Zea mays HOM05D000172 ORTHO05D008216 3.9e-25 118.6 120 45.8
FAN05G3852 Fragaria x ananassa HOM05D000172 ORTHO05D008216 5.1e-25 118.2 105 49.5
FAN09G4057 Fragaria x ananassa HOM05D000172 ORTHO05D000781 6.6e-25 117.9 102 52.0
QL08p030202 Quercus lobata HOM05D000172 ORTHO05D008216 6.6e-25 117.9 104 48.1
FAN02G3472 Fragaria x ananassa HOM05D000172 ORTHO05D008216 8.7e-25 117.5 105 50.5
Zm00001eb066900 Zea mays HOM05D000172 ORTHO05D008216 1.1e-24 117.1 120 45.8
Medtr5g084980 Medicago truncatula HOM05D000172 ORTHO05D008216 1.9e-24 116.3 112 50.0
ECA236G1458 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.3e-24 115.2 117 50.4
TPR.G25655 Trifolium pratense HOM05D000172 ORTHO05D008216 7.3e-24 114.4 107 51.4
Os04g0669100 Oryza sativa ssp. japonica HOM05D000172 ORTHO05D008216 9.6e-24 114.0 127 42.5
Sp1g03860 Schrenkiella parvula HOM05D000172 ORTHO05D008216 1.2e-23 113.6 125 44.8
Thhalv10008833m.g Eutrema salsugineum HOM05D000172 ORTHO05D008216 1.6e-23 113.2 125 44.8
arahy.Tifrunner.gnm1.ann1.YBUA9J Arachis hypogaea HOM05D000172 ORTHO05D008216 1.1e-22 110.5 98 51.0
BraA08t35564Z Brassica rapa HOM05D001534 ORTHO05D003503 1.4e-22 110.2 125 44.0
BcaB03g13463 Brassica carinata HOM05D000172 ORTHO05D008216 1.8e-22 109.8 125 43.2
CARHR004400 Cardamine hirsuta HOM05D000172 ORTHO05D008216 1.8e-22 109.8 103 50.5
BcaC07g36869 Brassica carinata HOM05D001534 ORTHO05D003503 2.4e-22 109.4 125 43.2
A08p36620 Brassica napus HOM05D001534 ORTHO05D003503 2.4e-22 109.4 125 43.2
C08p01620 Brassica napus HOM05D001534 ORTHO05D003503 2.4e-22 109.4 125 43.2
BolC8t46965H Brassica oleracea HOM05D001534 ORTHO05D003503 2.4e-22 109.4 125 43.2
arahy.Tifrunner.gnm1.ann1.Z24BKS Arachis hypogaea HOM05D000172 ORTHO05D008216 1.5e-21 106.7 103 49.5
unitig_578.g16772 Utricularia gibba HOM05D000172 ORTHO05D008216 1.5e-21 106.7 107 54.2
arahy.Tifrunner.gnm1.ann1.2252MW Arachis hypogaea HOM05D000172 ORTHO05D008216 2.0e-21 106.3 102 49.0
Solyc07g049470.4 Solanum lycopersicum HOM05D000172 ORTHO05D008216 4.4e-21 105.1 86 61.6
arahy.Tifrunner.gnm1.ann1.YE9ADV Arachis hypogaea HOM05D000172 ORTHO05D008216 9.3e-19 97.4 84 53.6
arahy.Tifrunner.gnm1.ann1.R9GX0H Arachis hypogaea HOM05D000172 ORTHO05D008216 3.5e-18 95.5 98 48.0
arahy.Tifrunner.gnm1.ann1.J9YZDG Arachis hypogaea HOM05D000172 ORTHO05D008216 2.1e-15 86.3 92 45.7
Pp3c2_22540 Physcomitrium patens HOM05D000172 ORTHO05D008216 2.1e-15 86.3 113 37.2
Oeu003064.1 Olea europaea HOM05D000172 ORTHO05D008216 8.1e-15 84.3 68 58.8
SEGI_22849 Sequoiadendron giganteum HOM05D000172 ORTHO05D008216 5.3e-14 81.6 53 66.0
SMO111G0036 Selaginella moellendorffii HOM05D000172 ORTHO05D008216 7.6e-13 77.8 104 39.4
SMO358G0556 Selaginella moellendorffii HOM05D000172 ORTHO05D008216 7.6e-13 77.8 104 39.4
SalBow1G5012 Salvia bowleyana HOM05D000172 ORTHO05D008216 2.9e-12 75.9 128 35.9
Aa31LG1G19790 Aethionema arabicum HOM05D000172 ORTHO05D008216 3.8e-12 75.5 148 33.1
CBR_g23765 Chara braunii HOM05D000172 ORTHO05D008216 4.9e-12 75.1 77 49.4
DCAR_021134 Daucus carota HOM05D000172 ORTHO05D008216 3.2e-11 72.4 44 72.7
AagrBONN_evm.TU.Sc2ySwM_228.5805 Anthoceros agrestis HOM05D000172 ORTHO05D008216 7.9e-10 67.8 94 40.4
arahy.Tifrunner.gnm1.ann1.UD09X1 Arachis hypogaea HOM05D000172 ORTHO05D008216 5.6e-08 61.6 112 32.1
Glyma.14G050300 Glycine max HOM05D000172 ORTHO05D008216 9.6e-08 60.8 66 47.0
arahy.Tifrunner.gnm1.ann1.7XK0ZA Arachis hypogaea HOM05D000172 ORTHO05D008216 6.2e-07 58.2 66 40.9
arahy.Tifrunner.gnm1.ann1.J7SF2C Arachis hypogaea HOM05D000172 ORTHO05D008216 1.1e-06 57.4 64 42.2
arahy.Tifrunner.gnm1.ann1.971VLJ Arachis hypogaea HOM05D000172 ORTHO05D008216 1.8e-06 56.6 66 39.4
CiPaw.03G154000 Carya illinoinensis HOM05D000172 ORTHO05D008216 4.0e-06 55.5 58 41.4


User provided reference genes

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