Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_019229 Daucus carota HOM05D007219 ORTHO05D008995 2.0e-135 485.7 244 100.0
Dinv05845 Davidia involucrata HOM05D007219 ORTHO05D008995 7.4e-77 291.2 192 75.0
TAR626G0546 Trochodendron aralioides HOM05D007219 ORTHO05D008995 5.3e-75 285.0 190 75.3
vmacro12114 Vaccinium macrocarpon HOM05D007219 ORTHO05D008995 9.1e-75 284.3 190 73.7
CSS0025035 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 1.5e-74 283.5 190 74.7
Nn1g03266 Nelumbo nucifera HOM05D007219 ORTHO05D008995 4.5e-74 282.0 188 73.9
Hma1.2p1_0133F.1_g061230 Hydrangea macrophylla HOM05D007219 ORTHO05D008995 5.9e-74 281.6 185 74.1
Cc07_g19250 Coffea canephora HOM05D007219 ORTHO05D008995 2.9e-73 279.3 190 73.7
CsaV3_7G002720 Cucumis sativus L. HOM05D007219 ORTHO05D008995 5.0e-73 278.5 183 76.0
GSVIVG01030037001 Vitis vinifera HOM05D007219 ORTHO05D008995 6.5e-73 278.1 190 73.7
Nitab4.5_0011106g0020 Nicotiana tabacum HOM05D007219 ORTHO05D008995 3.2e-72 275.8 190 72.1
Hund24148 Selenicereus undatus HOM05D007219 ORTHO05D008995 4.2e-72 275.4 198 70.7
Sopen05g025870 Solanum pennellii HOM05D007219 ORTHO05D008995 4.2e-72 275.4 190 71.6
Peaxi162Scf00147g01822 Petunia axillaris HOM05D007219 ORTHO05D008995 7.2e-72 274.6 188 71.8
Prupe.3G202800 Prunus persica HOM05D007219 ORTHO05D008995 1.6e-71 273.5 189 72.0
CAN.G716.12 Capsicum annuum HOM05D007219 ORTHO05D008995 3.6e-71 272.3 190 70.5
Atru.chr6.3346 Acer truncatum HOM05D007219 ORTHO05D008995 4.7e-71 271.9 190 73.2
THA.LOC104826618 Tarenaya hassleriana HOM05D007219 ORTHO05D008995 6.1e-71 271.6 190 70.5
Thecc.01G189100 Theobroma cacao HOM05D007219 ORTHO05D008995 1.8e-70 270.0 190 70.5
Migut.M00020 Erythranthe guttata HOM05D007219 ORTHO05D008995 3.0e-70 269.2 188 70.7
Eucgr.K00659 Eucalyptus grandis HOM05D007219 ORTHO05D008995 3.0e-70 269.2 187 70.1
Lsat_1_v5_gn_5_121560 Lactuca sativa HOM05D007219 ORTHO05D008995 5.1e-70 268.5 190 72.1
Lj6g0005071 Lotus japonicus HOM05D007219 ORTHO05D008995 5.1e-70 268.5 189 70.4
RcHm_v2.0_Chr2g0156861 Rosa chinensis HOM05D007219 ORTHO05D008995 5.1e-70 268.5 190 70.5
Duzib138G0301 Durio zibethinus HOM05D007219 ORTHO05D008995 2.6e-69 266.2 190 69.5
Gohir.D07G173000 Gossypium hirsutum HOM05D007219 ORTHO05D008995 3.3e-69 265.8 191 68.6
FvH4_6g41300 Fragaria vesca HOM05D007219 ORTHO05D008995 5.7e-69 265.0 190 70.0
Glyma.13G025700 Glycine max HOM05D007219 ORTHO05D008995 5.7e-69 265.0 192 70.8
Phvul.006G013300 Phaseolus vulgaris HOM05D007219 ORTHO05D008995 5.7e-69 265.0 184 71.2
FAN14G1895 Fragaria x ananassa HOM05D007219 ORTHO05D008995 7.4e-69 264.6 190 70.0
Gohir.A07G167500 Gossypium hirsutum HOM05D007219 ORTHO05D008995 7.4e-69 264.6 191 69.1
Gorai.001G193200 Gossypium raimondii HOM05D007219 ORTHO05D008995 9.7e-69 264.2 191 68.1
MD09G1120700 Malus domestica HOM05D007219 ORTHO05D008995 9.7e-69 264.2 183 71.6
ECA234G4660 Erigeron canadensis HOM05D007219 ORTHO05D008995 2.2e-68 263.1 194 68.6
Oeu029809.1 Olea europaea HOM05D007219 ORTHO05D008995 2.2e-68 263.1 190 68.9
PGSC0003DMG400020758 Solanum tuberosum HOM05D007219 ORTHO05D008995 2.2e-68 263.1 172 74.4
QL08p028873 Quercus lobata HOM05D007219 ORTHO05D008995 2.8e-68 262.7 187 69.5
Cpa.g.sc395.3 Carica papaya HOM05D007219 ORTHO05D008995 4.8e-68 261.9 190 69.5
SalBow7G0564 Salvia bowleyana HOM05D007219 ORTHO05D008995 8.2e-68 261.2 188 68.1
Sed0018447 Sechium edule HOM05D007219 ORTHO05D008995 8.2e-68 261.2 170 75.3
MSTRG.14930 Avicennia marina HOM05D007219 ORTHO05D008995 1.4e-67 260.4 190 68.9
Aqoxy1G04023 Aquilegia oxysepala HOM05D007219 ORTHO05D008995 1.8e-67 260.0 175 72.0
HanXRQChr12g0373931 Helianthus annuus HOM05D007219 ORTHO05D008995 1.8e-67 260.0 190 68.4
arahy.Tifrunner.gnm1.ann1.N6EW4G Arachis hypogaea HOM05D007219 ORTHO05D008995 2.4e-67 259.6 195 66.7
Manes.12G083700 Manihot esculenta HOM05D007219 ORTHO05D008995 3.1e-67 259.2 182 71.4
AL3G42440 Arabidopsis lyrata HOM05D007219 ORTHO05D008995 5.3e-67 258.5 185 67.6
Sp3g23430 Schrenkiella parvula HOM05D007219 ORTHO05D008995 5.3e-67 258.5 185 67.6
CARHR102840 Cardamine hirsuta HOM05D007219 ORTHO05D008995 7.0e-67 258.1 183 67.8
AT2G04845 Arabidopsis thaliana HOM05D007219 ORTHO05D008995 1.5e-66 256.9 183 68.3
PSO302G0207 Papaver somniferum HOM05D007219 ORTHO05D008995 1.5e-66 256.9 181 69.6
Psat5g102680 Pisum sativum HOM05D007219 ORTHO05D008995 2.6e-66 256.1 193 66.8
TWI36G0002 Tripterygium wilfordii HOM05D007219 ORTHO05D008995 2.6e-66 256.1 190 67.4
Medtr3g083200 Medicago truncatula HOM05D007219 ORTHO05D008995 3.4e-66 255.8 193 66.8
BolC3t17801H Brassica oleracea HOM05D007219 ORTHO05D008995 4.5e-66 255.4 185 66.5
Carub.0003s2645 Capsella rubella HOM05D007219 ORTHO05D008995 1.0e-65 254.2 185 66.5
TPR.G19322 Trifolium pratense HOM05D007219 ORTHO05D008995 1.0e-65 254.2 193 66.8
Lalb_Chr22g0360881 Lupinus albus HOM05D007219 ORTHO05D008995 1.3e-65 253.8 194 65.5
PGR142G0267 Punica granatum HOM05D007219 ORTHO05D008995 2.2e-65 253.1 195 66.2
CANSAT64G0298 Cannabis sativa HOM05D007219 ORTHO05D008995 5.0e-65 251.9 185 67.6
HPP92_020392 Vanilla planifolia HOM05D007219 ORTHO05D008995 5.0e-65 251.9 175 70.9
CDE10G1006 Ceratophyllum demersum HOM05D007219 ORTHO05D008995 1.1e-64 250.8 180 69.4
Thhalv10002661m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 1.1e-64 250.8 185 66.5
Aa31LG1G4150 Aethionema arabicum HOM05D002708 ORTHO05D003516 1.4e-64 250.4 185 67.0
Actinidia07878 Actinidia chinensis HOM05D007219 ORTHO05D008995 1.9e-64 250.0 163 76.1
Potri.014G161800 Populus trichocarpa HOM05D007219 ORTHO05D008995 7.2e-64 248.1 183 68.9
MELO3C024213.2 Cucumis melo HOM05D007219 ORTHO05D008995 8.0e-63 244.6 183 68.9
Os03g0194400 Oryza sativa ssp. japonica HOM05D007219 ORTHO05D008995 1.0e-62 244.2 179 67.6
MBI16_g42309_MAGBIO Magnolia biondii HOM05D007219 ORTHO05D008995 1.4e-62 243.8 169 72.2
Ciclev10016673m.g Citrus clementina HOM05D007219 ORTHO05D008995 4.4e-61 238.8 180 67.8
ATR0712G058 Amborella trichopoda HOM05D007219 ORTHO05D008995 5.7e-61 238.4 186 64.0
Haze_12702 Corylus avellana HOM05D007219 ORTHO05D008995 1.3e-60 237.3 189 63.0
Duzib133G0547 Durio zibethinus HOM05D007219 ORTHO05D008995 2.8e-60 236.1 188 65.4
CiPaw.03G278000 Carya illinoinensis HOM05D007219 ORTHO05D008995 8.2e-60 234.6 190 63.2
AUR62017530 Chenopodium quinoa HOM05D007219 ORTHO05D008995 2.4e-59 233.0 246 53.7
Dinv07849 Davidia involucrata HOM05D007219 ORTHO05D008995 1.6e-58 230.3 143 75.5
COL.COLO4_04268 Corchorus olitorius HOM05D007219 ORTHO05D008995 1.6e-55 220.3 151 70.9
Zm00001eb401150 Zea mays HOM05D007219 ORTHO05D008995 2.1e-55 219.9 149 69.1
EL10Ac9g22747 Beta vulgaris HOM05D007219 ORTHO05D008995 8.0e-55 218.0 184 62.5
Sabra14G0123400 Salix brachista HOM05D007219 ORTHO05D008995 8.0e-55 218.0 206 58.3
FAN05G4854 Fragaria x ananassa HOM05D007219 ORTHO05D008995 4.4e-53 212.2 196 59.7
arahy.Tifrunner.gnm1.ann1.E78GDQ Arachis hypogaea HOM05D007219 ORTHO05D008995 3.7e-52 209.1 321 40.5
arahy.Tifrunner.gnm1.ann1.XZ9N91 Arachis hypogaea HOM05D007219 ORTHO05D008995 3.7e-52 209.1 321 40.5
SGA_v2.0_scaffold73G24522 Striga asiatica HOM05D007219 ORTHO05D008995 1.7e-49 200.3 139 69.1
QL08p028923 Quercus lobata HOM05D007219 ORTHO05D008995 2.1e-47 193.4 337 37.7
Mapoly0089s0028 Marchantia polymorpha HOM05D007219 ORTHO05D008995 2.0e-45 186.8 169 53.3
SMO115G0308 Selaginella moellendorffii HOM05D007219 ORTHO05D008995 1.7e-44 183.7 171 53.2
Ah.14g082820 Amaranthus hybridus HOM05D007219 ORTHO05D008995 3.1e-43 179.5 129 69.8
ClCG02G002620 Citrullus lanatus HOM05D007219 ORTHO05D008995 7.0e-43 178.3 126 72.2
AUR62015074 Chenopodium quinoa HOM05D007219 ORTHO05D008995 2.9e-41 172.9 124 71.8
FAN02G0754 Fragaria x ananassa HOM05D007219 ORTHO05D008995 5.0e-41 172.2 190 52.1
Sc21g0000880 Simmondsia chinensis HOM05D007219 ORTHO05D008995 1.9e-40 170.2 111 71.2
VMungo0540G0477 Vigna mungo HOM05D007219 ORTHO05D008995 3.3e-40 169.5 189 51.3
Ca_16365_v3 Cicer arietinum L. HOM05D007219 ORTHO05D008995 1.5e-37 160.6 121 66.1
Cfa014252 Carpinus fangiana HOM05D007219 ORTHO05D008995 9.8e-37 157.9 135 57.8
Rhsim06G0172900 Rhododendron simsii HOM05D007219 ORTHO05D008995 1.1e-35 154.5 208 47.6
MCO15G116 Micromonas commoda HOM05D007219 ORTHO05D008995 5.0e-33 145.6 179 46.4
Nitab4.5_0002877g0050 Nicotiana tabacum HOM05D007219 ORTHO05D008995 1.2e-29 134.4 87 77.0
CBR_g31837 Chara braunii HOM05D007219 ORTHO05D008995 8.3e-28 128.3 273 29.7
MD17G1111700 Malus domestica HOM05D007219 ORTHO05D008995 1.3e-25 120.9 110 57.3
SEGI_01956 Sequoiadendron giganteum HOM05D007219 ORTHO05D008995 3.0e-25 119.8 83 62.7
CSS0035148 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 6.4e-20 102.1 78 70.5
Actinidia09773 Actinidia chinensis HOM05D007219 ORTHO05D008995 8.1e-15 85.1 55 70.9
Thhalv10003074m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 8.1e-15 85.1 103 49.5
PRCOL_00004041 Prasinoderma coloniale HOM05D007219 ORTHO05D008995 3.1e-14 83.2 165 34.5
AagrBONN_evm.TU.Sc2ySwM_362.1409 Anthoceros agrestis HOM05D007219 ORTHO05D008995 4.0e-14 82.8 129 38.0
MD17G1111600 Malus domestica HOM05D007219 ORTHO05D008995 8.3e-12 75.1 61 62.3
Oeu027288.1 Olea europaea HOM05D007219 ORTHO05D008995 5.1e-09 65.9 49 67.3
Cre03.g184151 Chlamydomonas reinhardtii HOM05D007219 ORTHO05D008995 9.5e-08 61.6 98 38.8
CSS0030489 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 2.4e-06 57.0 41 53.7


User provided reference genes

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