Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_019178 Daucus carota HOM05D000332 ORTHO05D000268 2.7e-71 271.9 144 100.0
DCAR_013025 Daucus carota HOM05D005116 ORTHO05D005937 7.6e-13 77.8 156 36.5
Potri.017G011200 Populus trichocarpa HOM05D000332 ORTHO05D000268 6.0e-10 68.2 180 29.4
Sed0028184 Sechium edule HOM05D000332 ORTHO05D000268 1.8e-09 66.6 40 67.5
Actinidia11019 Actinidia chinensis HOM05D000332 ORTHO05D000268 3.0e-09 65.9 191 29.3
Nn1g04130 Nelumbo nucifera HOM05D000332 ORTHO05D000268 3.9e-09 65.5 55 54.5
EL10Ac9g20790 Beta vulgaris HOM05D000332 ORTHO05D000268 8.7e-09 64.3 56 50.0
MBI07_g30203_MAGBIO Magnolia biondii HOM05D000332 ORTHO05D000268 8.7e-09 64.3 140 32.1
COL.COLO4_05941 Corchorus olitorius HOM05D000332 ORTHO05D000268 1.1e-08 63.9 139 30.2
Eucgr.F03306 Eucalyptus grandis HOM05D000332 ORTHO05D000268 1.1e-08 63.9 52 50.0
Lj3g0009834 Lotus japonicus HOM05D000332 ORTHO05D000268 1.1e-08 63.9 37 67.6
ClCG02G017730 Citrullus lanatus HOM05D000332 ORTHO05D000268 1.5e-08 63.5 197 28.9
TPR.G7954 Trifolium pratense HOM05D000332 ORTHO05D410651 1.5e-08 63.5 115 32.2
arahy.Tifrunner.gnm1.ann1.AQ1FTN Arachis hypogaea HOM05D000332 ORTHO05D000268 1.9e-08 63.2 38 65.8
arahy.Tifrunner.gnm1.ann1.LI7BU1 Arachis hypogaea HOM05D000332 ORTHO05D000268 1.9e-08 63.2 42 59.5
CSS0037870 Camellia sinensis var. sinensis HOM05D000332 ORTHO05D000268 1.9e-08 63.2 37 67.6
CSS0050374 Camellia sinensis var. sinensis HOM05D000332 ORTHO05D000268 1.9e-08 63.2 37 67.6
Ca_02830_v3 Cicer arietinum L. HOM05D000332 ORTHO05D000268 1.9e-08 63.2 41 56.1
MD09G1245000 Malus domestica HOM05D000332 ORTHO05D000268 1.9e-08 63.2 191 30.4
Medtr8g463180 Medicago truncatula HOM05D000332 ORTHO05D000268 1.9e-08 63.2 42 54.8
Cfa014635 Carpinus fangiana HOM05D000332 ORTHO05D000268 2.5e-08 62.8 61 49.2
Sed0022445 Sechium edule HOM05D000332 ORTHO05D000268 2.5e-08 62.8 184 28.8
CiPaw.03G178500 Carya illinoinensis HOM05D000332 ORTHO05D000268 3.3e-08 62.4 58 48.3
MELO3C013629.2 Cucumis melo HOM05D000332 ORTHO05D000268 4.3e-08 62.0 198 27.3
Hma1.2p1_1198F.1_g266280 Hydrangea macrophylla HOM05D000332 ORTHO05D000268 4.3e-08 62.0 148 30.4
Lalb_Chr25g0286291 Lupinus albus HOM05D000332 ORTHO05D000268 4.3e-08 62.0 55 50.9
Medtr2g079030 Medicago truncatula HOM05D000048 ORTHO05D002390 4.3e-08 62.0 115 31.3
Sabra17G0010100 Salix brachista HOM05D000332 ORTHO05D000268 4.3e-08 62.0 180 27.8
CsaV3_4G033620 Cucumis sativus L. HOM05D000332 ORTHO05D000268 5.6e-08 61.6 51 52.9
Gohir.D02G178800 Gossypium hirsutum HOM05D000332 ORTHO05D000268 5.6e-08 61.6 161 28.6
Manes.15G088000 Manihot esculenta HOM05D000332 ORTHO05D000268 7.4e-08 61.2 33 69.7
Nitab4.5_0001752g0080 Nicotiana tabacum HOM05D000332 ORTHO05D000268 7.4e-08 61.2 177 30.5
Nitab4.5_0006721g0060 Nicotiana tabacum HOM05D000332 ORTHO05D000268 7.4e-08 61.2 73 41.1
Duzib052G0510 Durio zibethinus HOM05D000332 ORTHO05D000268 9.6e-08 60.8 111 30.6
Psat5g244000 Pisum sativum HOM05D000332 ORTHO05D000268 9.6e-08 60.8 51 52.9
Potri.001G398800 Populus trichocarpa HOM05D000332 ORTHO05D000268 9.6e-08 60.8 53 56.6
Prupe.3G140900 Prunus persica HOM05D000332 ORTHO05D000268 9.6e-08 60.8 182 29.1
Solyc07g053880.3 Solanum lycopersicum HOM05D000332 ORTHO05D000268 9.6e-08 60.8 119 30.3
QL08p022250 Quercus lobata HOM05D000332 ORTHO05D000268 1.3e-07 60.5 168 28.0
Sc21g0003010 Simmondsia chinensis HOM05D000332 ORTHO05D000268 1.3e-07 60.5 51 51.0
Sopen07g027850 Solanum pennellii HOM05D000332 ORTHO05D000268 1.3e-07 60.5 116 30.2
Thecc.02G182100 Theobroma cacao HOM05D000332 ORTHO05D000268 1.3e-07 60.5 108 30.6
ClCG11G018000 Citrullus lanatus HOM05D000332 ORTHO05D000268 1.6e-07 60.1 153 29.4
FvH4_3g19770 Fragaria vesca HOM05D000332 ORTHO05D000268 1.6e-07 60.1 51 49.0
FAN25G2359 Fragaria x ananassa HOM05D000332 ORTHO05D000268 1.6e-07 60.1 51 49.0
vmacro12324 Vaccinium macrocarpon HOM05D000332 ORTHO05D000268 1.6e-07 60.1 51 52.9
FAN16G2263 Fragaria x ananassa HOM05D000332 ORTHO05D000268 2.1e-07 59.7 51 49.0
CsaV3_6G012830 Cucumis sativus L. HOM05D000332 ORTHO05D000268 2.8e-07 59.3 177 29.9
FAN11G2060 Fragaria x ananassa HOM05D000332 ORTHO05D000268 2.8e-07 59.3 51 49.0
Gorai.005G200600 Gossypium raimondii HOM05D000332 ORTHO05D000268 3.7e-07 58.9 169 29.0
RcHm_v2.0_Chr7g0225651 Rosa chinensis HOM05D000332 ORTHO05D000268 3.7e-07 58.9 45 57.8
MELO3C016691.2 Cucumis melo HOM05D000332 ORTHO05D000268 4.8e-07 58.5 37 62.2
Nitab4.5_0004959g0020 Nicotiana tabacum HOM05D000332 ORTHO05D000268 4.8e-07 58.5 73 38.4
Peaxi162Scf00059g00133 Petunia axillaris HOM05D000332 ORTHO05D000268 4.8e-07 58.5 111 32.4
CiPaw.11G170700 Carya illinoinensis HOM05D000332 ORTHO05D000268 6.2e-07 58.2 37 62.2
AUR62042886 Chenopodium quinoa HOM05D000332 ORTHO05D000268 6.2e-07 58.2 37 62.2
FAN13G1051 Fragaria x ananassa HOM05D000332 ORTHO05D000268 6.2e-07 58.2 48 56.2
Gohir.A03G155700 Gossypium hirsutum HOM05D000332 ORTHO05D000268 6.2e-07 58.2 184 26.1
MD03G1229600 Malus domestica HOM05D000332 ORTHO05D000268 6.2e-07 58.2 108 28.7
Manes.12G088900 Manihot esculenta HOM05D000332 ORTHO05D000268 6.2e-07 58.2 52 48.1
Peaxi162Scf00040g03017 Petunia axillaris HOM05D000332 ORTHO05D000268 6.2e-07 58.2 132 28.8
TAR626G0171 Trochodendron aralioides HOM05D000332 ORTHO05D000268 6.2e-07 58.2 37 62.2
GSVIVG01020567001 Vitis vinifera HOM05D000332 ORTHO05D000268 6.2e-07 58.2 51 51.0
TWI14G0068 Tripterygium wilfordii HOM05D000332 ORTHO05D000268 8.1e-07 57.8 110 30.0
Ah.01g017130 Amaranthus hybridus HOM05D000332 ORTHO05D000268 1.1e-06 57.4 104 32.7
Glyma.12G225500 Glycine max HOM05D000332 ORTHO05D000268 1.1e-06 57.4 51 51.0
Glyma.13G275800 Glycine max HOM05D000332 ORTHO05D000268 1.1e-06 57.4 51 52.9
Manes.03G109200 Manihot esculenta HOM05D000332 ORTHO05D000268 1.1e-06 57.4 157 30.6
Nitab4.5_0000638g0130 Nicotiana tabacum HOM05D000332 ORTHO05D000268 1.1e-06 57.4 180 30.0
RcHm_v2.0_Chr5g0033171 Rosa chinensis HOM05D000332 ORTHO05D000268 1.1e-06 57.4 51 47.1
Sabra16G0261400 Salix brachista HOM05D000332 ORTHO05D000268 1.1e-06 57.4 51 54.9
CDE09G0430 Ceratophyllum demersum HOM05D000332 ORTHO05D000268 1.4e-06 57.0 37 59.5
Cc03_g12060 Coffea canephora HOM05D000332 ORTHO05D000268 1.4e-06 57.0 37 54.1
Cc05_g07370 Coffea canephora HOM05D000332 ORTHO05D000268 1.4e-06 57.0 37 54.1
Lalb_Chr20g0109581 Lupinus albus HOM05D000332 ORTHO05D000268 1.4e-06 57.0 56 48.2
Ca_18941_v3 Cicer arietinum L. HOM05D000332 ORTHO05D000268 1.8e-06 56.6 160 28.1
FvH4_5g30760 Fragaria vesca HOM05D000332 ORTHO05D000268 1.8e-06 56.6 51 51.0
FAN18G0502 Fragaria x ananassa HOM05D000332 ORTHO05D000268 1.8e-06 56.6 51 51.0
Lalb_Chr19g0135201 Lupinus albus HOM05D000332 ORTHO05D000268 1.8e-06 56.6 143 30.8
Psat7g169000 Pisum sativum HOM05D000332 ORTHO05D000268 1.8e-06 56.6 152 27.6
Atru.chr6.2901 Acer truncatum HOM05D000332 ORTHO05D000268 2.4e-06 56.2 160 28.1
CANSAT64G1170 Cannabis sativa HOM05D000332 ORTHO05D000268 2.4e-06 56.2 52 50.0
Carub.0007s1238 Capsella rubella HOM05D000332 ORTHO05D000268 2.4e-06 56.2 51 47.1
Lj4g0008232 Lotus japonicus HOM05D000332 ORTHO05D000268 2.4e-06 56.2 132 29.5
PGR142G2072 Punica granatum HOM05D000332 ORTHO05D000268 2.4e-06 56.2 111 30.6
TWI39G0638 Tripterygium wilfordii HOM05D000332 ORTHO05D000268 2.4e-06 56.2 51 49.0
arahy.Tifrunner.gnm1.ann1.051ZG9 Arachis hypogaea HOM05D000332 ORTHO05D000268 3.1e-06 55.8 116 30.2
CAN.G209.37 Capsicum annuum HOM05D000332 ORTHO05D000268 3.1e-06 55.8 51 49.0
Manes.13G145100 Manihot esculenta HOM05D000332 ORTHO05D000268 3.1e-06 55.8 52 46.2
TPR.G18388 Trifolium pratense HOM05D000332 ORTHO05D000268 3.1e-06 55.8 118 28.8
Dinv13397 Davidia involucrata HOM05D000332 ORTHO05D000268 4.0e-06 55.5 37 59.5
Dinv20185 Davidia involucrata HOM05D000332 ORTHO05D000268 4.0e-06 55.5 37 59.5
SGA_v2.0_scaffold34G13807 Striga asiatica HOM05D000332 ORTHO05D000268 4.0e-06 55.5 37 59.5
THA.LOC104811869 Tarenaya hassleriana HOM05D000332 ORTHO05D000268 4.0e-06 55.5 154 26.6
TWI38G1167 Tripterygium wilfordii HOM05D000332 ORTHO05D000268 4.0e-06 55.5 55 43.6
CAN.G988.8 Capsicum annuum HOM05D000332 ORTHO05D000268 5.3e-06 55.1 67 37.3
Cpa.g.sc80.79 Carica papaya HOM05D000332 ORTHO05D000268 5.3e-06 55.1 153 26.1
Lj8C155T8 Lonicera japonica HOM05D000332 ORTHO05D000268 5.3e-06 55.1 165 26.7
VMungo1080G1422 Vigna mungo HOM05D000332 ORTHO05D000268 5.3e-06 55.1 55 45.5
CSS0005675 Camellia sinensis var. sinensis HOM05D000332 ORTHO05D000268 6.9e-06 54.7 56 44.6
CSS0010134 Camellia sinensis var. sinensis HOM05D000332 ORTHO05D000268 6.9e-06 54.7 56 44.6
Lj3g0010669 Lotus japonicus HOM05D000332 ORTHO05D000268 6.9e-06 54.7 37 56.8
Nitab4.5_0000207g0010 Nicotiana tabacum HOM05D000332 ORTHO05D000268 6.9e-06 54.7 55 41.8
QL08p039586 Quercus lobata HOM05D000332 ORTHO05D000268 6.9e-06 54.7 145 29.7
ECA236G4672 Erigeron canadensis HOM05D000332 ORTHO05D000268 9.0e-06 54.3 157 27.4
Medtr2g090580 Medicago truncatula HOM05D000332 ORTHO05D000268 9.0e-06 54.3 51 45.1
Potri.011G117800 Populus trichocarpa HOM05D000332 ORTHO05D000268 9.0e-06 54.3 157 29.3
VMungo1127G0837 Vigna mungo HOM05D000332 ORTHO05D000268 9.0e-06 54.3 51 49.0


User provided reference genes

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