Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_019118 Daucus carota HOM05D000187 ORTHO05D005916 1.9e-176 622.5 329 100.0
Lj1A918T46 Lonicera japonica HOM05D000187 ORTHO05D005916 2.4e-38 163.7 303 39.9
CSS0009934 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D005916 3.1e-38 163.3 327 36.4
Dinv31334 Davidia involucrata HOM05D000187 ORTHO05D005916 1.2e-37 161.4 328 37.2
Rhsim03G0124300 Rhododendron simsii HOM05D000187 ORTHO05D005916 2.7e-37 160.2 324 36.4
CSS0024672 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D005916 1.2e-34 151.4 327 35.8
Potri.010G220700 Populus trichocarpa HOM05D000187 ORTHO05D005916 3.4e-32 143.3 307 34.2
GSVIVG01016299001 Vitis vinifera HOM05D000187 ORTHO05D005916 3.4e-32 143.3 323 34.1
vmacro07079 Vaccinium macrocarpon HOM05D000187 ORTHO05D005916 1.7e-31 141.0 309 35.3
Dinv11787 Davidia involucrata HOM05D000187 ORTHO05D005916 2.0e-29 134.0 306 38.2
DCAR_006455 Daucus carota HOM05D000187 ORTHO05D005916 2.9e-28 130.2 308 35.7
Actinidia38267 Actinidia chinensis HOM05D000187 ORTHO05D005916 1.9e-27 127.5 329 33.1
QL08p056329 Quercus lobata HOM05D000187 ORTHO05D005916 2.1e-26 124.0 328 33.5
Sabra08G0028000 Salix brachista HOM05D000187 ORTHO05D005916 1.4e-25 121.3 310 31.3
TAR636G0951 Trochodendron aralioides HOM05D000187 ORTHO05D005916 2.3e-25 120.6 330 32.1
CSS0010500 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D005916 3.1e-25 120.2 324 33.0
GSVIVG01025655001 Vitis vinifera HOM05D000187 ORTHO05D005916 8.9e-25 118.6 328 31.4
Actinidia03050 Actinidia chinensis HOM05D000187 ORTHO05D005916 3.4e-24 116.7 327 32.7
CiPaw.01G274200 Carya illinoinensis HOM05D000187 ORTHO05D005916 4.4e-24 116.3 325 33.2
TAR633G0001 Trochodendron aralioides HOM05D000187 ORTHO05D005916 4.4e-24 116.3 330 33.9
Sabra10G0170500 Salix brachista HOM05D000187 ORTHO05D005916 3.2e-22 110.2 309 31.7
Haze_20619 Corylus avellana HOM05D000187 ORTHO05D005916 2.3e-20 104.0 317 31.2
QL07p044805 Quercus lobata HOM05D000187 ORTHO05D005916 3.9e-20 103.2 312 31.4
COL.COLO4_27046 Corchorus olitorius HOM05D000187 ORTHO05D005916 5.6e-19 99.4 317 33.4
TWI63G0123 Tripterygium wilfordii HOM05D000187 ORTHO05D005916 7.3e-19 99.0 309 32.7
Thecc.05G057000 Theobroma cacao HOM05D000187 ORTHO05D005916 3.1e-17 93.6 311 32.5
CiPaw.09G178000 Carya illinoinensis HOM05D000187 ORTHO05D005916 1.5e-16 91.3 314 33.1
TWI38G1582 Tripterygium wilfordii HOM05D000187 ORTHO05D005916 3.4e-16 90.1 309 29.8
Lj2A110G55 Lonicera japonica HOM05D000187 ORTHO05D005916 5.8e-16 89.4 327 30.0
Nn2g10740 Nelumbo nucifera HOM05D000187 ORTHO05D005916 1.3e-15 88.2 330 30.0
Manes.08G005200 Manihot esculenta HOM05D000187 ORTHO05D005916 2.9e-15 87.0 312 30.8
Manes.08G004106 Manihot esculenta HOM05D000187 ORTHO05D005916 3.7e-15 86.7 312 30.8
Glyma.19G180000 Glycine max HOM05D000187 ORTHO05D005916 8.3e-15 85.5 329 29.8
Duzib093G0363 Durio zibethinus HOM05D000187 ORTHO05D005916 1.1e-14 85.1 321 32.4
Actinidia13093 Actinidia chinensis HOM05D000187 ORTHO05D005916 1.9e-14 84.3 328 29.0
Manes.08G004116 Manihot esculenta HOM05D000187 ORTHO05D005916 3.2e-14 83.6 312 30.4
Manes.08G004122 Manihot esculenta HOM05D000187 ORTHO05D005916 3.2e-14 83.6 312 30.4
Manes.08G004128 Manihot esculenta HOM05D000187 ORTHO05D005916 4.1e-14 83.2 312 30.1
Nn2g13049 Nelumbo nucifera HOM05D000187 ORTHO05D005916 4.1e-14 83.2 330 28.8
Phvul.007G221700 Phaseolus vulgaris HOM05D000187 ORTHO05D005916 5.4e-14 82.8 306 27.1
Duzib128G0619 Durio zibethinus HOM05D000187 ORTHO05D005916 1.2e-13 81.6 255 35.3
Prupe.6G238800 Prunus persica HOM05D000187 ORTHO05D005916 1.2e-13 81.6 298 30.9
Lalb_Chr01g0018951 Lupinus albus HOM05D000187 ORTHO05D005916 1.6e-13 81.3 225 32.4
Glyma.10G051200 Glycine max HOM05D000187 ORTHO05D005916 2.7e-13 80.5 296 27.7
Medtr7g100950 Medicago truncatula HOM05D000187 ORTHO05D005916 3.5e-13 80.1 329 28.3
Gohir.A09G150900 Gossypium hirsutum HOM05D000187 ORTHO05D005916 4.6e-13 79.7 321 32.1
Manes.08G004121 Manihot esculenta HOM05D000187 ORTHO05D005916 6.0e-13 79.3 312 30.1
Potri.008G041201 Populus trichocarpa HOM05D000187 ORTHO05D005916 1.0e-12 78.6 305 27.2
Glyma.03G179300 Glycine max HOM05D000187 ORTHO05D005916 1.3e-12 78.2 306 30.7
VMungo0720G2148 Vigna mungo HOM05D000187 ORTHO05D005916 1.3e-12 78.2 337 26.1
MD04G1100800 Malus domestica HOM05D000187 ORTHO05D005916 3.0e-12 77.0 253 31.6
COL.COLO4_23706 Corchorus olitorius HOM05D000187 ORTHO05D005916 5.1e-12 76.3 217 35.0
Ca_08834_v3 Cicer arietinum L. HOM05D000187 ORTHO05D005916 6.6e-12 75.9 318 27.0
Gohir.D09G146500 Gossypium hirsutum HOM05D000187 ORTHO05D005916 8.6e-12 75.5 312 30.8
Lalb_Chr20g0112811 Lupinus albus HOM05D000187 ORTHO05D005916 8.6e-12 75.5 310 27.7
MD12G1120500 Malus domestica HOM05D000187 ORTHO05D005916 1.5e-11 74.7 269 31.2
Gorai.006G167700 Gossypium raimondii HOM05D000187 ORTHO05D005916 1.9e-11 74.3 314 30.9
Glyma.13G138700 Glycine max HOM05D000187 ORTHO05D005916 3.3e-11 73.6 297 27.9
RcHm_v2.0_Chr3g0469341 Rosa chinensis HOM05D000187 ORTHO05D005916 7.3e-11 72.4 304 28.3
Lj1g0027469 Lotus japonicus HOM05D000187 ORTHO05D005916 9.5e-11 72.0 295 28.1
HanXRQChr14g0457221 Helianthus annuus HOM05D000187 ORTHO05D005916 1.6e-10 71.2 291 30.2
CSS0014211 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D005916 2.1e-10 70.9 328 25.3
Phvul.001G176000 Phaseolus vulgaris HOM05D000187 ORTHO05D005916 2.1e-10 70.9 340 27.9
Manes.08G004902 Manihot esculenta HOM05D000187 ORTHO05D005916 2.8e-10 70.5 274 31.0
Psat3g044680 Pisum sativum HOM05D000187 ORTHO05D005916 3.6e-10 70.1 321 27.1
Ciclev10011412m.g Citrus clementina HOM05D000187 ORTHO05D005916 4.7e-10 69.7 262 32.8
Cc06_g03760 Coffea canephora HOM05D000187 ORTHO05D005916 8.1e-10 68.9 328 26.5
Hund20201 Selenicereus undatus HOM05D000187 ORTHO05D005916 1.4e-09 68.2 225 33.8
Aqoxy4G03246 Aquilegia oxysepala HOM05D000187 ORTHO05D005916 1.8e-09 67.8 314 26.1
FAN05G1888 Fragaria x ananassa HOM05D000187 ORTHO05D005916 1.8e-09 67.8 254 31.1
FvH4_6g15650 Fragaria vesca HOM05D000187 ORTHO05D005916 6.8e-09 65.9 263 29.7
FAN14G0677 Fragaria x ananassa HOM05D000187 ORTHO05D005916 6.8e-09 65.9 263 29.7
VMungo1383G3362 Vigna mungo HOM05D000190 ORTHO05D005916 6.8e-09 65.9 281 28.8
Sc02g0001880 Simmondsia chinensis HOM05D000187 ORTHO05D005916 8.9e-09 65.5 217 34.6
FAN02G4435 Fragaria x ananassa HOM05D000187 ORTHO05D005916 7.5e-08 62.4 263 30.4
TWI53G0724 Tripterygium wilfordii HOM05D000187 ORTHO05D005916 3.7e-07 60.1 252 30.6
AUR62040492 Chenopodium quinoa HOM05D000187 ORTHO05D005916 4.9e-07 59.7 194 33.5
EL10Ac7g16533 Beta vulgaris HOM05D000187 ORTHO05D005916 1.9e-06 57.8 225 32.4
AUR62042546 Chenopodium quinoa HOM05D000187 ORTHO05D005916 2.4e-06 57.4 194 34.0
PGR142G2245 Punica granatum HOM05D000187 ORTHO05D005916 3.2e-06 57.0 325 24.9


User provided reference genes

Program Settings