Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_019102 Daucus carota HOM05D002510 ORTHO05D006928 4.1e-150 534.6 261 100.0
Lj1C913T4 Lonicera japonica HOM05D002510 ORTHO05D006928 2.3e-116 422.5 279 76.0
Oeu031347.1 Olea europaea HOM05D002510 ORTHO05D006928 3.0e-116 422.2 268 76.9
GSVIVG01016268001 Vitis vinifera HOM05D002510 ORTHO05D006928 2.1e-114 416.0 266 76.7
HanXRQChr14g0456861 Helianthus annuus HOM05D002510 ORTHO05D006928 4.8e-114 414.8 268 74.6
Dinv31320 Davidia involucrata HOM05D002510 ORTHO05D006928 1.4e-113 413.3 274 73.7
Potri.008G039300 Populus trichocarpa HOM05D002510 ORTHO05D006928 1.5e-112 409.8 282 71.6
Lsat_1_v5_gn_2_112320 Lactuca sativa HOM05D002510 ORTHO05D006928 2.0e-112 409.5 268 74.6
Thecc.10G074800 Theobroma cacao HOM05D002510 ORTHO05D006928 2.0e-112 409.5 252 77.0
Prupe.2G213200 Prunus persica HOM05D002510 ORTHO05D006928 7.6e-112 407.5 227 82.8
CiPaw.01G272400 Carya illinoinensis HOM05D002510 ORTHO05D006928 2.9e-111 405.6 282 70.6
Haze_16887 Corylus avellana HOM05D002510 ORTHO05D006928 1.1e-110 403.7 286 68.9
Manes.07G100200 Manihot esculenta HOM05D002510 ORTHO05D006928 1.1e-110 403.7 230 79.6
MD01G1108300 Malus domestica HOM05D002510 ORTHO05D006928 2.4e-110 402.5 285 69.1
FAN01G2940 Fragaria x ananassa HOM05D002510 ORTHO05D007210 1.2e-109 400.2 276 69.9
Sabra08G0027000 Salix brachista HOM05D002510 ORTHO05D006928 2.1e-109 399.4 224 82.1
CSS0017911 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 2.7e-109 399.1 223 83.0
RcHm_v2.0_Chr1g0363321 Rosa chinensis HOM05D002510 ORTHO05D006928 3.5e-109 398.7 275 69.8
FAN03G1741 Fragaria x ananassa HOM05D002510 ORTHO05D006928 4.6e-109 398.3 278 69.4
FAN06G0282 Fragaria x ananassa HOM05D002510 ORTHO05D006928 4.6e-109 398.3 278 69.8
Duzib128G0305 Durio zibethinus HOM05D002510 ORTHO05D006928 1.0e-108 397.1 276 71.0
Phvul.007G094800 Phaseolus vulgaris HOM05D002510 ORTHO05D006928 1.3e-108 396.7 276 69.9
Nitab4.5_0002524g0010 Nicotiana tabacum HOM05D002510 ORTHO05D006928 1.7e-108 396.4 259 72.6
Cc02_g11320 Coffea canephora HOM05D002510 ORTHO05D006928 2.3e-108 396.0 258 74.8
QL08p055746 Quercus lobata HOM05D002510 ORTHO05D006928 2.3e-108 396.0 227 80.2
Eucgr.G02836 Eucalyptus grandis HOM05D002510 ORTHO05D006928 3.0e-108 395.6 268 70.5
FvH4_7g19440 Fragaria vesca HOM05D002510 ORTHO05D006928 3.0e-108 395.6 278 69.1
Gohir.A10G205600 Gossypium hirsutum HOM05D002510 ORTHO05D006928 3.0e-108 395.6 225 81.3
THA.LOC104827063 Tarenaya hassleriana HOM05D002510 ORTHO05D006928 3.0e-108 395.6 251 74.9
TWI15G0405 Tripterygium wilfordii HOM05D002510 ORTHO05D006928 3.9e-108 395.2 266 71.4
Glyma.10G210800 Glycine max HOM05D002510 ORTHO05D006928 6.6e-108 394.4 274 70.1
MD07G1174400 Malus domestica HOM05D002510 ORTHO05D006928 6.6e-108 394.4 228 78.9
PGSC0003DMG400033889 Solanum tuberosum HOM05D002510 ORTHO05D006928 6.6e-108 394.4 246 76.0
Duzib114G0372 Durio zibethinus HOM05D002510 ORTHO05D006928 8.7e-108 394.0 240 76.2
Gorai.011G239300 Gossypium raimondii HOM05D002510 ORTHO05D006928 2.5e-107 392.5 277 70.8
Nitab4.5_0001053g0060 Nicotiana tabacum HOM05D002510 ORTHO05D006928 2.5e-107 392.5 276 68.5
arahy.Tifrunner.gnm1.ann1.D0MVTX Arachis hypogaea HOM05D002510 ORTHO05D006928 4.3e-107 391.7 239 76.6
CsaV3_6G036450 Cucumis sativus L. HOM05D002510 ORTHO05D006928 4.3e-107 391.7 229 78.2
FAN10G3768 Fragaria x ananassa HOM05D002510 ORTHO05D007210 5.6e-107 391.3 278 68.7
Lj5g0027397 Lotus japonicus HOM05D002510 ORTHO05D006928 7.3e-107 391.0 270 69.3
Actinidia06769 Actinidia chinensis HOM05D002510 ORTHO05D006928 9.6e-107 390.6 281 72.2
Hund12054 Selenicereus undatus HOM05D002510 ORTHO05D006928 9.6e-107 390.6 284 66.9
FAN10G0968 Fragaria x ananassa HOM05D002510 ORTHO05D007210 1.3e-106 390.2 282 68.1
Glyma.20G179800 Glycine max HOM05D002510 ORTHO05D006928 1.3e-106 390.2 275 68.7
MSTRG.9172 Avicennia marina HOM05D002510 ORTHO05D006928 1.6e-106 389.8 230 79.1
MELO3C019798.2 Cucumis melo HOM05D002510 ORTHO05D006928 1.6e-106 389.8 249 73.5
Atru.chr12.758 Acer truncatum HOM05D002510 ORTHO05D006928 2.1e-106 389.4 268 70.9
ClCG08G007520 Citrullus lanatus HOM05D002510 ORTHO05D006928 4.8e-106 388.3 283 66.8
CAN.G131.8 Capsicum annuum HOM05D002510 ORTHO05D006928 6.2e-106 387.9 260 73.1
Potri.010G222900 Populus trichocarpa HOM05D002510 ORTHO05D006928 6.2e-106 387.9 270 68.5
arahy.Tifrunner.gnm1.ann1.B5KM0B Arachis hypogaea HOM05D002510 ORTHO05D006928 1.1e-105 387.1 238 76.5
Ca_10569_v3 Cicer arietinum L. HOM05D002800 ORTHO05D008563 1.8e-105 386.3 223 79.4
Psat6g183480 Pisum sativum HOM05D002510 ORTHO05D006928 2.4e-105 386.0 256 71.1
Medtr1g095000 Medicago truncatula HOM05D002510 ORTHO05D006928 5.3e-105 384.8 275 67.3
Sp4g21360 Schrenkiella parvula HOM05D002510 ORTHO05D006928 5.3e-105 384.8 226 78.8
PGR142G1169 Punica granatum HOM05D002510 ORTHO05D006928 6.9e-105 384.4 264 70.5
Thhalv10017009m.g Eutrema salsugineum HOM05D002510 ORTHO05D006928 3.4e-104 382.1 230 77.4
AL4G36300 Arabidopsis lyrata HOM05D002510 ORTHO05D006928 5.8e-104 381.3 249 72.3
AT2G39000 Arabidopsis thaliana HOM05D002510 ORTHO05D006928 7.6e-104 380.9 250 72.0
Gohir.D10G213800 Gossypium hirsutum HOM05D002510 ORTHO05D006928 7.6e-104 380.9 222 80.6
Lalb_Chr06g0162351 Lupinus albus HOM05D002510 ORTHO05D006928 9.9e-104 380.6 241 73.9
EL10Ac3g05855 Beta vulgaris HOM05D002510 ORTHO05D006928 1.7e-103 379.8 268 69.0
Migut.F01984 Erythranthe guttata HOM05D002510 ORTHO05D006928 1.7e-103 379.8 254 71.7
Carub.0004s2104 Capsella rubella HOM05D002510 ORTHO05D006928 2.2e-103 379.4 256 71.1
Sed0007153 Sechium edule HOM05D002510 ORTHO05D006928 3.8e-103 378.6 269 68.8
Sc20g0001820 Simmondsia chinensis HOM05D002510 ORTHO05D006928 3.8e-103 378.6 254 73.2
Lalb_Chr02g0142201 Lupinus albus HOM05D002510 ORTHO05D006928 6.4e-103 377.9 239 73.2
Ah.10g032650 Amaranthus hybridus HOM05D002510 ORTHO05D006928 1.4e-102 376.7 222 78.4
BcaC02g12914 Brassica carinata HOM05D002510 ORTHO05D006928 1.9e-102 376.3 223 77.6
AUR62037755 Chenopodium quinoa HOM05D002510 ORTHO05D006928 9.3e-102 374.0 250 72.0
C04p67010 Brassica napus HOM05D002510 ORTHO05D006928 1.6e-101 373.2 238 73.5
BolC4t28203H Brassica oleracea HOM05D002510 ORTHO05D006928 1.6e-101 373.2 238 73.5
Nn2g10810 Nelumbo nucifera HOM05D002510 ORTHO05D006928 6.0e-101 371.3 224 75.4
TAR369G0428 Trochodendron aralioides HOM05D002510 ORTHO05D006928 6.0e-101 371.3 253 70.4
BraA04t18437Z Brassica rapa HOM05D002510 ORTHO05D006928 1.3e-100 370.2 223 76.2
CARHR133780 Cardamine hirsuta HOM05D002510 ORTHO05D006928 1.8e-100 369.8 226 77.0
Ciclev10032329m.g Citrus clementina HOM05D002510 ORTHO05D006928 1.5e-99 366.7 277 64.6
Actinidia38854 Actinidia chinensis HOM05D002510 ORTHO05D006928 4.3e-99 365.2 276 68.1
AUR62018249 Chenopodium quinoa HOM05D002510 ORTHO05D006928 9.6e-99 364.0 261 67.0
CSS0041581 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 1.6e-98 363.2 273 66.3
Sabra10G0172300 Salix brachista HOM05D002510 ORTHO05D006928 2.1e-98 362.8 228 74.6
CSS0006577 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 2.8e-98 362.5 273 65.9
Aqoxy1G01228 Aquilegia oxysepala HOM05D002510 ORTHO05D006928 1.1e-97 360.5 239 72.0
vmacro04869 Vaccinium macrocarpon HOM05D002510 ORTHO05D006928 4.0e-97 358.6 271 66.1
A04p29730 Brassica napus HOM05D002510 ORTHO05D006928 5.3e-97 358.2 246 69.5
Glyma.02G074000 Glycine max HOM05D002510 ORTHO05D006928 1.5e-96 356.7 257 69.6
TAR623G0044 Trochodendron aralioides HOM05D002510 ORTHO05D006928 1.3e-95 353.6 283 62.5
PSO063G7611 Papaver somniferum HOM05D002510 ORTHO05D006928 3.8e-95 352.1 272 61.0
Rhsim03G0120400 Rhododendron simsii HOM05D002510 ORTHO05D006928 1.4e-94 350.1 224 75.9
PSO339G5277 Papaver somniferum HOM05D002510 ORTHO05D006928 1.6e-93 346.7 272 60.7
Lj3g0006441 Lotus japonicus HOM05D002510 ORTHO05D006928 3.0e-92 342.4 222 71.6
Phvul.004G083200 Phaseolus vulgaris HOM05D002510 ORTHO05D006928 1.9e-91 339.7 273 63.0
Lalb_Chr03g0035921 Lupinus albus HOM05D002510 ORTHO05D006928 2.1e-90 336.3 267 62.2
VMungo1197G0001 Vigna mungo HOM05D002510 ORTHO05D006928 2.1e-90 336.3 256 64.5
SGA_v2.0_scaffold62G21410 Striga asiatica HOM05D002510 ORTHO05D006928 5.3e-89 331.6 259 64.9
ECA238G3090 Erigeron canadensis HOM05D002510 ORTHO05D006928 4.5e-88 328.6 256 64.5
TPR.G1934 Trifolium pratense HOM05D002510 ORTHO05D006928 1.3e-87 327.0 245 65.7
Migut.F01753 Erythranthe guttata HOM05D002510 ORTHO05D006928 1.1e-86 323.9 258 63.2
ATR0048G011 Amborella trichopoda HOM05D002510 ORTHO05D006928 1.0e-84 317.4 268 58.2
CDE04G1444 Ceratophyllum demersum HOM05D002510 ORTHO05D006928 1.0e-84 317.4 229 65.1
HPP92_014717 Vanilla planifolia HOM05D002510 ORTHO05D006928 8.7e-84 314.3 226 64.6
Peaxi162Scf01719g00013 Petunia axillaris HOM05D002510 ORTHO05D006928 3.7e-82 308.9 256 60.2
VMungo0464G1224 Vigna mungo HOM05D002510 ORTHO05D006928 3.7e-82 308.9 280 57.9
arahy.Tifrunner.gnm1.ann1.DB5KD4 Arachis hypogaea HOM05D002510 ORTHO05D006928 6.3e-82 308.1 272 58.5
Lj3g0019343 Lotus japonicus HOM05D002510 ORTHO05D006928 6.3e-82 308.1 245 62.4
arahy.Tifrunner.gnm1.ann1.L5PTYD Arachis hypogaea HOM05D002510 ORTHO05D006928 2.4e-81 306.2 272 58.1
SalBow4G2249 Salvia bowleyana HOM05D002510 ORTHO05D006928 2.4e-81 306.2 225 65.3
Cpa.g.sc53.85 Carica papaya HOM05D002510 ORTHO05D006928 2.0e-80 303.1 174 79.3
Os02g0806000 Oryza sativa ssp. japonica HOM05D002510 ORTHO05D006928 4.5e-80 302.0 233 61.4
Dinv36437 Davidia involucrata HOM05D002510 ORTHO05D006928 1.7e-79 300.1 230 67.8
unitig_88.g27817 Utricularia gibba HOM05D002510 ORTHO05D006928 4.6e-77 292.0 243 60.1
Atru.chr12.782 Acer truncatum HOM05D002510 ORTHO05D006928 3.0e-76 289.3 173 78.0
Gohir.D10G213900 Gossypium hirsutum HOM05D002510 ORTHO05D006928 1.1e-75 287.3 165 81.2
Gohir.A10G205500 Gossypium hirsutum HOM05D002510 ORTHO05D006928 6.5e-71 271.6 167 77.2
SEGI_15474 Sequoiadendron giganteum HOM05D002510 ORTHO05D006928 8.5e-71 271.2 211 60.7
SalBow3G0053 Salvia bowleyana HOM05D002510 ORTHO05D006928 3.6e-69 265.8 165 73.3
Oeu014386.1 Olea europaea HOM05D002510 ORTHO05D006928 8.8e-68 261.2 164 74.4
CAN.G790.5 Capsicum annuum HOM05D002510 ORTHO05D006928 1.8e-60 236.9 136 78.7
CDE06G2540 Ceratophyllum demersum HOM05D002510 ORTHO05D006928 2.8e-58 229.6 157 69.4
Aa31LG5G20680 Aethionema arabicum HOM05D002510 ORTHO05D006928 3.5e-56 222.6 131 78.6
vmacro07070 Vaccinium macrocarpon HOM05D002510 ORTHO05D006928 3.5e-56 222.6 192 65.6
Sopen04g011630 Solanum pennellii HOM05D002510 ORTHO05D006928 6.5e-55 218.4 139 74.1
Solyc04g025240.2 Solanum lycopersicum HOM05D002510 ORTHO05D006928 8.8e-52 208.0 145 68.3
Mapoly0033s0159 Marchantia polymorpha HOM05D002510 ORTHO05D006928 4.8e-50 202.2 237 43.5
Glyma.16G155400 Glycine max HOM05D002510 ORTHO05D006928 3.6e-45 186.0 178 56.7
SMO134G0014 Selaginella moellendorffii HOM05D002510 ORTHO05D006928 2.3e-44 183.3 210 45.7
Zm00001eb172140 Zea mays HOM05D002510 ORTHO05D006928 1.2e-43 181.0 133 65.4
Lj2g0015916 Lotus japonicus HOM05D002510 ORTHO05D006928 1.4e-41 174.1 178 55.6
Solyc04g025230.1 Solanum lycopersicum HOM05D002510 ORTHO05D006928 4.6e-32 142.5 93 68.8
Haze_18780 Corylus avellana HOM05D000278 ORTHO05D005754 2.3e-28 130.2 131 55.0
Ciclev10024578m.g Citrus clementina HOM05D002510 ORTHO05D006928 1.9e-22 110.5 90 57.8
Nn3g20716 Nelumbo nucifera HOM05D002510 ORTHO05D006928 1.8e-20 104.0 133 47.4
AagrBONN_evm.TU.Sc2ySwM_117.96 Anthoceros agrestis HOM05D000001 ORTHO05D000003 8.9e-20 101.7 127 45.7
Actinidia32448 Actinidia chinensis HOM05D002510 ORTHO05D006928 2.4e-17 93.6 80 56.2
Cre16.g662650 Chlamydomonas reinhardtii HOM05D002510 ORTHO05D006928 9.5e-14 81.6 119 37.8
PRCOL_00005349 Prasinoderma coloniale HOM05D002510 ORTHO05D006928 4.4e-11 72.8 77 50.6
A03p21800 Brassica napus HOM05D002510 ORTHO05D006928 3.8e-10 69.7 41 65.9
Actinidia37356 Actinidia chinensis HOM05D002510 ORTHO05D006928 7.1e-09 65.5 67 55.2
MCO13G231 Micromonas commoda HOM05D005733 ORTHO05D006928 1.6e-08 64.3 84 36.9
Mapoly0005s0071 Marchantia polymorpha HOM05D006231 ORTHO05D007857 9.6e-06 55.1 62 38.7


User provided reference genes

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