Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_019078 Daucus carota HOM05D005991 ORTHO05D007408 6.5e-135 484.2 265 100.0
CSS0003210 Camellia sinensis var. sinensis HOM05D005991 ORTHO05D007408 1.1e-76 290.8 254 66.5
Dinv05101 Davidia involucrata HOM05D005991 ORTHO05D007408 4.0e-76 288.9 259 65.3
Lj9A696T49 Lonicera japonica HOM05D005991 ORTHO05D007408 2.6e-75 286.2 259 65.6
Oeu009727.1 Olea europaea HOM05D005991 ORTHO05D007408 3.3e-70 269.2 252 65.1
Lsat_1_v5_gn_4_27741 Lactuca sativa HOM05D005991 ORTHO05D007408 2.8e-69 266.2 255 63.1
SGA_v2.0_scaffold66G22528 Striga asiatica HOM05D002451 ORTHO05D005601 2.8e-69 266.2 259 62.2
MSTRG.22639 Avicennia marina HOM05D005991 ORTHO05D007408 3.6e-69 265.8 230 66.1
Haze_00826 Corylus avellana HOM05D005991 ORTHO05D007408 4.7e-69 265.4 258 63.6
Rhsim02G0001600 Rhododendron simsii HOM05D005991 ORTHO05D007408 6.2e-69 265.0 242 65.7
TAR633G0953 Trochodendron aralioides HOM05D005991 ORTHO05D007408 1.8e-68 263.5 269 59.5
Eucgr.H04085 Eucalyptus grandis HOM05D005991 ORTHO05D007408 2.3e-68 263.1 258 61.2
GSVIVG01017637001 Vitis vinifera HOM05D005991 ORTHO05D007408 3.1e-68 262.7 255 63.9
vmacro19301 Vaccinium macrocarpon HOM05D005991 ORTHO05D007408 6.8e-68 261.5 237 65.0
Cfa015696 Carpinus fangiana HOM05D005991 ORTHO05D007408 8.9e-68 261.2 258 62.0
Actinidia28298 Actinidia chinensis HOM05D005991 ORTHO05D007408 3.4e-67 259.2 257 61.9
ECA234G0222 Erigeron canadensis HOM05D005991 ORTHO05D007408 3.4e-67 259.2 241 64.7
MBI18_g36460_MAGBIO Magnolia biondii HOM05D005991 ORTHO05D007408 7.5e-67 258.1 272 57.4
Migut.I00898 Erythranthe guttata HOM05D005991 ORTHO05D007408 9.9e-67 257.7 254 61.4
HanXRQChr16g0526201 Helianthus annuus HOM05D005991 ORTHO05D007408 1.7e-66 256.9 250 60.8
EL10Ac2g02410 Beta vulgaris HOM05D005991 ORTHO05D007408 4.9e-66 255.4 240 62.5
PGR004G0142 Punica granatum HOM05D005991 ORTHO05D007408 1.9e-65 253.4 225 64.4
TAR362G0621 Trochodendron aralioides HOM05D005991 ORTHO05D007408 2.4e-65 253.1 245 61.6
Sc23g0006090 Simmondsia chinensis HOM05D005991 ORTHO05D007408 3.2e-65 252.7 255 59.6
Actinidia18486 Actinidia chinensis HOM05D005991 ORTHO05D007408 1.2e-64 250.8 206 69.4
Potri.010G151300 Populus trichocarpa HOM05D005991 ORTHO05D007408 2.7e-64 249.6 250 60.8
Lj4g0017646 Lotus japonicus HOM05D005991 ORTHO05D007408 6.0e-64 248.4 264 58.0
FvH4_4g20890 Fragaria vesca HOM05D005991 ORTHO05D007408 1.3e-63 247.3 265 58.9
FAN17G2933 Fragaria x ananassa HOM05D005991 ORTHO05D007408 1.7e-63 246.9 265 58.9
FAN12G0391 Fragaria x ananassa HOM05D005991 ORTHO05D007408 3.0e-63 246.1 256 59.8
Nn3g21864 Nelumbo nucifera HOM05D005991 ORTHO05D007408 3.9e-63 245.7 260 58.5
Psat0s2692g0080 Pisum sativum HOM05D005991 ORTHO05D007408 1.1e-62 244.2 249 59.8
RcHm_v2.0_Chr4g0426321 Rosa chinensis HOM05D005991 ORTHO05D007408 1.1e-62 244.2 272 57.7
unitig_32.g11589 Utricularia gibba HOM05D005991 ORTHO05D007408 1.1e-62 244.2 236 61.0
Lalb_Chr13g0298761 Lupinus albus HOM05D005991 ORTHO05D007408 1.5e-62 243.8 256 60.5
Aqoxy7G00454 Aquilegia oxysepala HOM05D005991 ORTHO05D007408 1.9e-62 243.4 249 60.2
Manes.03G209000 Manihot esculenta HOM05D005991 ORTHO05D007408 1.9e-62 243.4 228 64.5
FAN07G2713 Fragaria x ananassa HOM05D005991 ORTHO05D007408 3.3e-62 242.7 277 56.3
Nitab4.5_0013885g0020 Nicotiana tabacum HOM05D005991 ORTHO05D007408 3.3e-62 242.7 230 63.0
TWI73G0156 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 7.3e-62 241.5 254 60.2
Nitab4.5_0003374g0080 Nicotiana tabacum HOM05D005991 ORTHO05D007408 9.5e-62 241.1 229 64.2
TWI09G0093 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 1.1e-60 237.7 254 59.1
TWI53G1476 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 3.1e-60 236.1 254 58.7
Glyma.07G232800 Glycine max HOM05D005991 ORTHO05D007408 4.0e-60 235.7 256 60.5
TPR.G12610 Trifolium pratense HOM05D005991 ORTHO05D007408 4.0e-60 235.7 231 60.2
QL06p013384 Quercus lobata HOM05D005991 ORTHO05D007408 1.2e-59 234.2 259 57.9
Sed0009947 Sechium edule HOM05D005991 ORTHO05D007408 2.0e-59 233.4 248 56.0
CsaV3_6G000060 Cucumis sativus L. HOM05D005991 ORTHO05D007408 3.4e-59 232.6 266 56.4
Phvul.003G118700 Phaseolus vulgaris HOM05D005991 ORTHO05D007408 7.6e-59 231.5 256 58.2
Medtr4g123060 Medicago truncatula HOM05D005991 ORTHO05D007408 9.9e-59 231.1 229 59.4
Ca_21401_v3 Cicer arietinum L. HOM05D005991 ORTHO05D007408 1.3e-58 230.7 248 54.8
MELO3C021248.2 Cucumis melo HOM05D005991 ORTHO05D007408 1.3e-58 230.7 248 56.9
MD13G1147500 Malus domestica HOM05D005991 ORTHO05D007408 1.3e-58 230.7 269 56.9
CAN.G1173.8 Capsicum annuum HOM05D005991 ORTHO05D007408 2.9e-58 229.6 264 56.1
CiPaw.01G133100 Carya illinoinensis HOM05D005991 ORTHO05D007408 3.8e-58 229.2 184 72.3
Prupe.1G111000 Prunus persica HOM05D005991 ORTHO05D007408 4.9e-58 228.8 274 55.1
Os01g0328500 Oryza sativa ssp. japonica HOM05D005991 ORTHO05D007408 6.4e-58 228.4 259 52.9
Peaxi162Scf00139g00312 Petunia axillaris HOM05D005991 ORTHO05D007408 1.4e-57 227.3 230 61.3
Cpa.g.sc146.66 Carica papaya HOM05D005991 ORTHO05D007408 2.4e-57 226.5 252 59.1
Cc10_g13510 Coffea canephora HOM05D005991 ORTHO05D007408 2.4e-57 226.5 255 55.7
Ah.11g042100 Amaranthus hybridus HOM05D005991 ORTHO05D007408 3.2e-57 226.1 249 55.0
ClCG06G004330 Citrullus lanatus HOM05D005991 ORTHO05D007408 3.2e-57 226.1 252 55.6
PGSC0003DMG400030844 Solanum tuberosum HOM05D005991 ORTHO05D007408 4.2e-57 225.7 260 55.4
Atru.chr4.3094 Acer truncatum HOM05D005991 ORTHO05D007408 1.2e-56 224.2 263 54.4
Sopen04g029760 Solanum pennellii HOM05D005991 ORTHO05D007408 1.2e-56 224.2 259 55.6
Duzib151G0057 Durio zibethinus HOM05D005991 ORTHO05D007408 2.1e-56 223.4 221 60.2
ATR0693G149 Amborella trichopoda HOM05D005991 ORTHO05D007408 6.0e-56 221.9 232 56.5
Zm00001eb131050 Zea mays HOM05D005991 ORTHO05D007408 6.0e-56 221.9 229 57.6
THA.LOC104827106 Tarenaya hassleriana HOM05D005991 ORTHO05D007408 7.8e-56 221.5 225 57.8
MD16G1145900 Malus domestica HOM05D005991 ORTHO05D007408 1.0e-55 221.1 226 61.5
VMungo1215G0582 Vigna mungo HOM05D005991 ORTHO05D007408 1.0e-55 221.1 256 56.2
Aa31LG11G8380 Aethionema arabicum HOM05D005991 ORTHO05D007408 1.3e-55 220.7 247 53.8
Ciclev10005452m.g Citrus clementina HOM05D005991 ORTHO05D007408 5.1e-55 218.8 238 55.9
Cc00_g31090 Coffea canephora HOM05D005991 ORTHO05D007408 5.1e-55 218.8 255 54.5
HPP92_017296 Vanilla planifolia HOM05D005991 ORTHO05D007408 8.7e-55 218.0 226 57.5
Gohir.A02G056400 Gossypium hirsutum HOM05D005991 ORTHO05D007408 1.5e-54 217.2 281 48.4
Zm00001eb340570 Zea mays HOM05D005991 ORTHO05D007408 2.5e-54 216.5 199 62.8
arahy.Tifrunner.gnm1.ann1.ELD4MI Arachis hypogaea HOM05D005991 ORTHO05D007408 3.3e-54 216.1 226 60.2
Gohir.D02G061600 Gossypium hirsutum HOM05D005991 ORTHO05D007408 3.3e-54 216.1 280 48.6
Carub.0020s0004 Capsella rubella HOM05D005991 ORTHO05D007408 4.3e-54 215.7 240 52.9
Gorai.005G069300 Gossypium raimondii HOM05D005991 ORTHO05D007408 4.3e-54 215.7 280 48.2
Thecc.04G307900 Theobroma cacao HOM05D005991 ORTHO05D007408 5.6e-54 215.3 312 46.2
Solyc04g074800.3 Solanum lycopersicum HOM05D005991 ORTHO05D007408 1.3e-53 214.2 263 53.2
CANSAT78G1707 Cannabis sativa HOM05D005991 ORTHO05D007408 1.6e-53 213.8 258 53.1
Sp2g19950 Schrenkiella parvula HOM05D005991 ORTHO05D007408 4.8e-53 212.2 240 52.9
Sp6g09550 Schrenkiella parvula HOM05D005991 ORTHO05D007408 8.1e-53 211.5 247 51.4
AL6G41020 Arabidopsis lyrata HOM05D005991 ORTHO05D007408 1.1e-52 211.1 241 52.3
Glyma.17G037800 Glycine max HOM05D005991 ORTHO05D007408 1.1e-52 211.1 256 57.8
arahy.Tifrunner.gnm1.ann1.5JMV2K Arachis hypogaea HOM05D005991 ORTHO05D007408 1.8e-52 210.3 225 58.7
CARHR185530 Cardamine hirsuta HOM05D005991 ORTHO05D007408 4.0e-52 209.1 236 53.4
PSO017G0870 Papaver somniferum HOM05D005991 ORTHO05D007408 4.0e-52 209.1 241 54.4
BcaNung02118 Brassica carinata HOM05D005991 ORTHO05D007408 6.9e-52 208.4 247 51.4
C07p40040 Brassica napus HOM05D005991 ORTHO05D007408 6.9e-52 208.4 247 51.4
BolC7t44538H Brassica oleracea HOM05D005991 ORTHO05D007408 9.0e-52 208.0 247 51.4
A09p05050 Brassica napus HOM05D005991 ORTHO05D007408 3.4e-51 206.1 243 51.4
C09p05460 Brassica napus HOM05D005991 ORTHO05D007408 3.4e-51 206.1 234 53.4
BraA09t36144Z Brassica rapa HOM05D005991 ORTHO05D007408 3.4e-51 206.1 243 51.4
BcaB04g19640 Brassica carinata HOM05D005991 ORTHO05D007408 4.4e-51 205.7 243 51.9
PSO675G8194 Papaver somniferum HOM05D005991 ORTHO05D007408 4.4e-51 205.7 241 53.9
BraA06t26732Z Brassica rapa HOM05D005991 ORTHO05D007408 9.9e-51 204.5 247 51.4
AT5G30490 Arabidopsis thaliana HOM05D005991 ORTHO05D007408 1.7e-50 203.8 241 50.2
A06p38170 Brassica napus HOM05D005991 ORTHO05D007408 1.7e-50 203.8 247 51.0
COL.COLO4_34551 Corchorus olitorius HOM05D005991 ORTHO05D007408 1.9e-49 200.3 169 68.6
BcaC04g23714 Brassica carinata HOM05D005991 ORTHO05D007408 2.4e-49 199.9 234 52.1
BolC9t53475H Brassica oleracea HOM05D005991 ORTHO05D007408 9.3e-49 198.0 258 48.8
Thhalv10004825m.g Eutrema salsugineum HOM05D005991 ORTHO05D007408 3.0e-47 193.0 249 47.8
AUR62020284 Chenopodium quinoa HOM05D005991 ORTHO05D007408 6.6e-47 191.8 250 49.2
AUR62037721 Chenopodium quinoa HOM05D005991 ORTHO05D007408 1.3e-45 187.6 250 48.8
arahy.Tifrunner.gnm1.ann1.KWD76U Arachis hypogaea HOM05D005991 ORTHO05D007408 1.8e-44 183.7 256 48.0
BcaC06g30693 Brassica carinata HOM05D005991 ORTHO05D007408 5.8e-43 178.7 254 44.9
PGR119G0116 Punica granatum HOM05D005991 ORTHO05D007408 1.6e-40 170.6 121 72.7
SEGI_07358 Sequoiadendron giganteum HOM05D005991 ORTHO05D007408 8.7e-39 164.9 277 42.2
Mapoly0030s0047 Marchantia polymorpha HOM05D005991 ORTHO05D007408 1.3e-34 151.0 277 40.1
CSS0020858 Camellia sinensis var. sinensis HOM05D005991 ORTHO05D007408 6.5e-34 148.7 126 66.7
arahy.Tifrunner.gnm1.ann1.FWR109 Arachis hypogaea HOM05D005991 ORTHO05D007408 4.8e-29 132.5 121 64.5
CDE05G0304 Ceratophyllum demersum HOM05D005991 ORTHO05D007408 1.8e-28 130.6 170 51.8
SMO203G0019 Selaginella moellendorffii HOM05D005991 ORTHO05D007408 2.4e-28 130.2 232 41.4
Pp3c5_15500 Physcomitrium patens HOM05D005991 ORTHO05D007408 6.5e-26 122.1 253 36.0
Cre14.g632600 Chlamydomonas reinhardtii HOM05D005991 ORTHO05D007408 1.2e-24 117.9 285 32.6
AagrBONN_evm.TU.Sc2ySwM_117.1275 Anthoceros agrestis HOM05D005991 ORTHO05D007408 6.1e-24 115.5 233 37.3
CBR_g56129 Chara braunii HOM05D005991 ORTHO05D007408 1.1e-22 111.3 179 40.2
MCO08G234 Micromonas commoda HOM05D005991 ORTHO05D007408 3.9e-15 86.3 182 36.8
Actinidia31584 Actinidia chinensis HOM05D005991 ORTHO05D007408 5.7e-14 82.4 217 36.9
PRCOL_00003370 Prasinoderma coloniale HOM05D005991 ORTHO05D007408 6.9e-12 75.5 158 38.0
Sabra10G0116500 Salix brachista HOM05D005991 ORTHO05D007408 2.5e-09 67.0 119 42.0
GSVIVG01017610001 Vitis vinifera HOM05D005991 ORTHO05D007408 1.4e-07 61.2 138 39.1
AL1G65220 Arabidopsis lyrata HOM05D005991 ORTHO05D007408 2.3e-07 60.5 62 53.2


User provided reference genes

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