Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_018980 Daucus carota HOM05D007318 ORTHO05D009289 5.1e-176 620.9 303 100.0
Dinv09616 Davidia involucrata HOM05D007318 ORTHO05D009289 5.9e-116 421.4 294 69.4
Oeu026589.2 Olea europaea HOM05D007318 ORTHO05D009289 1.5e-111 406.8 295 65.1
Rhsim03G0098000 Rhododendron simsii HOM05D007318 ORTHO05D009289 1.3e-110 403.7 279 67.0
Actinidia18618 Actinidia chinensis HOM05D007318 ORTHO05D009289 2.8e-110 402.5 295 63.7
CSS0001089 Camellia sinensis var. sinensis HOM05D007318 ORTHO05D009289 3.1e-109 399.1 292 63.4
CSS0042589 Camellia sinensis var. sinensis HOM05D007318 ORTHO05D009289 7.0e-109 397.9 292 63.0
GSVIVG01001002001 Vitis vinifera HOM05D007318 ORTHO05D009289 2.2e-107 392.9 273 65.6
Haze_02511 Corylus avellana HOM05D007318 ORTHO05D009289 5.5e-106 388.3 280 64.3
CiPaw.14G032900 Carya illinoinensis HOM05D007318 ORTHO05D009289 2.1e-105 386.3 271 66.1
Gohir.D02G016400 Gossypium hirsutum HOM05D007318 ORTHO05D009289 2.1e-105 386.3 273 65.2
Gorai.005G019900 Gossypium raimondii HOM05D007318 ORTHO05D009289 2.7e-105 386.0 273 65.2
QL04p044887 Quercus lobata HOM05D007318 ORTHO05D009289 3.6e-105 385.6 273 67.0
Nitab4.5_0001437g0020 Nicotiana tabacum HOM05D007318 ORTHO05D009289 1.0e-104 384.0 273 65.2
MD02G1257000 Malus domestica HOM05D007318 ORTHO05D009289 1.4e-104 383.6 273 64.1
Nn7g37225 Nelumbo nucifera HOM05D007318 ORTHO05D009289 1.4e-104 383.6 273 64.5
Atru.chr12.1022 Acer truncatum HOM05D007318 ORTHO05D009289 1.8e-104 383.3 275 65.8
Nitab4.5_0011538g0040 Nicotiana tabacum HOM05D007318 ORTHO05D009289 1.8e-104 383.3 273 66.3
Migut.F01608 Erythranthe guttata HOM05D007318 ORTHO05D009289 4.0e-104 382.1 275 66.2
Ciclev10016201m.g Citrus clementina HOM05D007318 ORTHO05D009289 5.2e-104 381.7 277 63.9
HanXRQChr07g0194021 Helianthus annuus HOM05D007318 ORTHO05D009289 5.2e-104 381.7 276 64.9
TWI63G0749 Tripterygium wilfordii HOM05D007318 ORTHO05D009289 4.4e-103 378.6 273 64.5
ECA238G4459 Erigeron canadensis HOM05D007318 ORTHO05D009289 1.3e-102 377.1 273 64.8
CAN.G645.12 Capsicum annuum HOM05D007318 ORTHO05D009289 2.2e-102 376.3 270 64.4
Duzib151G0977 Durio zibethinus HOM05D007318 ORTHO05D009289 2.2e-102 376.3 273 65.2
SalBow6G3105 Salvia bowleyana HOM05D007318 ORTHO05D009289 3.7e-102 375.6 297 63.6
Sopen11g002850 Solanum pennellii HOM05D007318 ORTHO05D009289 6.3e-102 374.8 279 63.4
RcHm_v2.0_Chr1g0332361 Rosa chinensis HOM05D007318 ORTHO05D009289 1.1e-101 374.0 274 62.8
COL.COLO4_33011 Corchorus olitorius HOM05D007318 ORTHO05D009289 1.4e-101 373.6 279 63.4
Peaxi162Scf00173g00322 Petunia axillaris HOM05D007318 ORTHO05D009289 4.1e-101 372.1 267 64.8
Eucgr.J00256 Eucalyptus grandis HOM05D007318 ORTHO05D009289 5.4e-101 371.7 279 63.4
Sabra10G0186800 Salix brachista HOM05D007318 ORTHO05D009289 5.4e-101 371.7 273 61.5
Lj6g0015884 Lotus japonicus HOM05D007318 ORTHO05D009289 3.5e-100 369.0 273 60.4
CsaV3_5G035390 Cucumis sativus L. HOM05D007318 ORTHO05D009289 6.5e-99 364.8 276 60.9
FAN06G3353 Fragaria x ananassa HOM05D007318 ORTHO05D009289 6.5e-99 364.8 272 63.6
Manes.03G085100 Manihot esculenta HOM05D007318 ORTHO05D009289 6.5e-99 364.8 275 61.8
FAN01G1304 Fragaria x ananassa HOM05D007318 ORTHO05D009289 8.6e-99 364.4 272 63.6
CANSAT56G0802 Cannabis sativa HOM05D007318 ORTHO05D009289 1.1e-98 364.0 301 58.8
Cc02_g09660 Coffea canephora HOM05D007318 ORTHO05D009289 2.5e-98 362.8 275 61.1
Phvul.007G242433 Phaseolus vulgaris HOM05D007318 ORTHO05D009289 5.5e-98 361.7 273 61.9
FvH4_7g05530 Fragaria vesca HOM05D007318 ORTHO05D009289 7.2e-98 361.3 272 63.2
Lsat_1_v5_gn_2_104460 Lactuca sativa HOM05D007318 ORTHO05D009289 2.8e-97 359.4 281 63.0
Lj2A32G32 Lonicera japonica HOM05D007318 ORTHO05D009289 6.1e-97 358.2 276 63.0
MBI13_g32993_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 6.1e-97 358.2 276 60.5
Glyma.15G117500 Glycine max HOM05D007318 ORTHO05D009289 1.0e-96 357.5 274 61.7
Hund22276 Selenicereus undatus HOM05D007318 ORTHO05D009289 2.3e-96 356.3 272 59.9
SGA_v2.0_scaffold13G06456 Striga asiatica HOM05D007318 ORTHO05D009289 4.0e-96 355.5 271 63.5
Lalb_Chr01g0010421 Lupinus albus HOM05D007318 ORTHO05D009289 6.8e-96 354.8 272 58.8
VMungo0720G2068 Vigna mungo HOM05D007318 ORTHO05D009289 8.8e-96 354.4 272 61.0
Sed0005914 Sechium edule HOM05D007318 ORTHO05D009289 3.4e-95 352.4 273 59.0
arahy.Tifrunner.gnm1.ann1.CJJ3HV Arachis hypogaea HOM05D007318 ORTHO05D009289 3.5e-92 342.4 287 56.1
arahy.Tifrunner.gnm1.ann1.CYVU5X Arachis hypogaea HOM05D007318 ORTHO05D009289 3.5e-92 342.4 287 56.1
arahy.Tifrunner.gnm1.ann1.PPG341 Arachis hypogaea HOM05D007318 ORTHO05D009289 3.5e-92 342.4 287 56.1
Prupe.2G075500 Prunus persica HOM05D007318 ORTHO05D009289 3.3e-90 335.9 231 68.0
MELO3C012351.2 Cucumis melo HOM05D007318 ORTHO05D009289 4.3e-90 335.5 289 55.4
EL10Ac4g08684 Beta vulgaris HOM05D007318 ORTHO05D009289 7.3e-90 334.7 271 56.1
TPR.G10614 Trifolium pratense HOM05D007318 ORTHO05D009289 1.0e-88 330.9 281 56.9
PGR044G0176 Punica granatum HOM05D007318 ORTHO05D009289 7.5e-87 324.7 224 66.1
Ca_20265_v3 Cicer arietinum L. HOM05D007318 ORTHO05D009289 8.3e-86 321.2 284 54.9
MBI13_g44214_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 1.4e-85 320.5 273 55.3
unitig_0.g1560 Utricularia gibba HOM05D007318 ORTHO05D009289 9.2e-85 317.8 275 54.9
Aqoxy1G02117 Aquilegia oxysepala HOM05D007318 ORTHO05D009289 1.6e-84 317.0 274 56.9
Solyc11g006930.3 Solanum lycopersicum HOM05D007318 ORTHO05D009289 1.6e-84 317.0 229 65.9
PSO384G0062 Papaver somniferum HOM05D007318 ORTHO05D009289 2.0e-84 316.6 278 54.3
Potri.010G238500 Populus trichocarpa HOM05D007318 ORTHO05D009289 5.9e-84 315.1 224 63.4
Zm00001eb196200 Zea mays HOM05D007318 ORTHO05D009289 1.3e-83 313.9 271 55.0
Medtr1g050425 Medicago truncatula HOM05D007318 ORTHO05D009289 1.5e-82 310.5 304 50.3
Os11g0136500 Oryza sativa ssp. japonica HOM05D007318 ORTHO05D009289 1.9e-82 310.1 267 54.3
Cpa.g.sc5.264 Carica papaya HOM05D007318 ORTHO05D009289 4.0e-80 302.4 235 59.1
ClCG05G018410 Citrullus lanatus HOM05D007318 ORTHO05D009289 6.8e-80 301.6 276 54.0
Psat2g020440 Pisum sativum HOM05D007318 ORTHO05D009289 3.4e-79 299.3 314 48.4
Aqoxy1G02095 Aquilegia oxysepala HOM05D007318 ORTHO05D009289 4.4e-79 298.9 286 52.8
Os12g0133400 Oryza sativa ssp. japonica HOM05D007318 ORTHO05D009289 4.4e-79 298.9 267 52.4
ATR1096G030 Amborella trichopoda HOM05D007318 ORTHO05D009289 3.9e-75 285.8 231 55.0
Cfa011269 Carpinus fangiana HOM05D007318 ORTHO05D009289 2.9e-70 269.6 189 64.0
TAR636G1683 Trochodendron aralioides HOM05D007318 ORTHO05D009289 1.1e-69 267.7 176 73.3
HPP92_018209 Vanilla planifolia HOM05D007318 ORTHO05D009289 2.4e-69 266.5 271 48.7
AagrBONN_evm.TU.Sc2ySwM_368.1913 Anthoceros agrestis HOM05D007318 ORTHO05D009289 7.3e-66 255.0 278 45.0
AUR62043602 Chenopodium quinoa HOM05D007318 ORTHO05D009289 9.5e-66 254.6 328 42.7
Glyma.02G164100 Glycine max HOM05D007318 ORTHO05D009289 1.8e-64 250.4 179 65.9
ClCG05G021760 Citrullus lanatus HOM05D007318 ORTHO05D009289 2.0e-63 246.9 188 59.6
Thecc.03G070600 Theobroma cacao HOM05D007318 ORTHO05D009289 1.7e-62 243.8 164 73.2
Mapoly0020s0170 Marchantia polymorpha HOM05D007318 ORTHO05D009289 1.7e-59 233.8 276 41.7
MSTRG.421 Avicennia marina HOM05D007318 ORTHO05D009289 3.0e-59 233.0 168 68.5
AUR62042079 Chenopodium quinoa HOM05D007318 ORTHO05D009289 8.7e-59 231.5 189 55.0
Psat6g095000 Pisum sativum HOM05D007318 ORTHO05D009289 7.8e-52 208.4 274 41.2
SMO172G0015 Selaginella moellendorffii HOM05D007318 ORTHO05D009289 2.8e-49 199.9 250 42.8
Pp3c5_16220 Physcomitrium patens HOM05D007318 ORTHO05D009289 5.4e-45 185.7 235 40.4
ClCG00G005260 Citrullus lanatus HOM05D007318 ORTHO05D009289 9.3e-45 184.9 133 59.4
Gohir.A02G015000 Gossypium hirsutum HOM05D007318 ORTHO05D009289 3.5e-44 183.0 137 54.7
Lsat_1_v5_gn_5_177140 Lactuca sativa HOM05D007318 ORTHO05D009289 2.1e-41 173.7 154 60.4
PRCOL_00002097 Prasinoderma coloniale HOM05D007318 ORTHO05D009289 3.1e-40 169.9 279 32.3
MBI13_g43865_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 7.6e-39 165.2 110 63.6
SEGI_17929 Sequoiadendron giganteum HOM05D007318 ORTHO05D009289 1.1e-37 161.4 130 60.8
MCO07G233 Micromonas commoda HOM05D007318 ORTHO05D009289 2.7e-28 130.2 309 29.4
Dinv09612 Davidia involucrata HOM05D007318 ORTHO05D009289 1.3e-27 127.9 151 50.3
PGSC0003DMG400023973 Solanum tuberosum HOM05D007318 ORTHO05D009289 5.1e-27 125.9 87 69.0
SEGI_12071 Sequoiadendron giganteum HOM05D007318 ORTHO05D009289 2.7e-20 103.6 117 41.9
Cre07.g323750 Chlamydomonas reinhardtii HOM05D007318 ORTHO05D009289 2.8e-17 93.6 168 34.5
Glyma.20G074100 Glycine max HOM05D007318 ORTHO05D009289 5.9e-15 85.9 90 48.9
Sed0011362 Sechium edule HOM05D005118 ORTHO05D006038 7.9e-12 75.5 178 27.0
Lj6g0000477 Lotus japonicus HOM05D007318 ORTHO05D009289 1.8e-11 74.3 106 39.6
MELO3C011647.2 Cucumis melo HOM05D005118 ORTHO05D006038 3.9e-11 73.2 161 28.6
TAR636G1493 Trochodendron aralioides HOM05D007318 ORTHO05D009289 1.5e-10 71.2 51 64.7
CsaV3_6G003860 Cucumis sativus L. HOM05D005118 ORTHO05D006038 2.0e-10 70.9 161 27.3
ClCG08G004490 Citrullus lanatus HOM05D005118 ORTHO05D006038 7.4e-10 68.9 162 28.4
Phvul.007G152100 Phaseolus vulgaris HOM05D005118 ORTHO05D006038 1.8e-08 64.3 229 25.3
Migut.J01020 Erythranthe guttata HOM05D005118 ORTHO05D006038 2.4e-08 63.9 233 24.0
MBI13_g44208_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 4.1e-08 63.2 39 61.5
PSO063G5626 Papaver somniferum HOM05D005118 ORTHO05D006038 5.3e-08 62.8 226 21.7
CiPaw.09G015400 Carya illinoinensis HOM05D005118 ORTHO05D006038 7.0e-08 62.4 177 25.4
PSO782G2273 Papaver somniferum HOM05D005118 ORTHO05D006038 7.0e-08 62.4 226 21.2
AUR62006198 Chenopodium quinoa HOM05D005118 ORTHO05D006038 1.2e-07 61.6 159 25.2
TAR365G0960 Trochodendron aralioides HOM05D005118 ORTHO05D006038 2.0e-07 60.8 158 26.6
unitig_748.g8118 Utricularia gibba HOM05D005118 ORTHO05D006038 2.0e-07 60.8 219 24.2
Gohir.A01G205500 Gossypium hirsutum HOM05D005118 ORTHO05D006038 2.6e-07 60.5 158 27.8
Lsat_1_v5_gn_9_20681 Lactuca sativa HOM05D005118 ORTHO05D006038 3.4e-07 60.1 157 26.8
Gohir.D01G195000 Gossypium hirsutum HOM05D005118 ORTHO05D006038 4.5e-07 59.7 158 27.8
AUR62037021 Chenopodium quinoa HOM05D005118 ORTHO05D006038 5.9e-07 59.3 159 25.2
Gorai.002G239100 Gossypium raimondii HOM05D005118 ORTHO05D006038 5.9e-07 59.3 158 27.2
CARHR145210 Cardamine hirsuta HOM05D005118 ORTHO05D006038 7.7e-07 58.9 233 21.9
Glyma.13G154600 Glycine max HOM05D005118 ORTHO05D006038 1.0e-06 58.5 159 27.7
Thecc.05G091100 Theobroma cacao HOM05D005118 ORTHO05D006038 1.3e-06 58.2 171 27.5
CSS0000835 Camellia sinensis var. sinensis HOM05D005118 ORTHO05D006038 1.7e-06 57.8 159 25.2
Dinv21195 Davidia involucrata HOM05D005118 ORTHO05D006038 1.7e-06 57.8 139 26.6
Ciclev10011946m.g Citrus clementina HOM05D005118 ORTHO05D006038 2.9e-06 57.0 158 28.5
Duzib093G2169 Durio zibethinus HOM05D005118 ORTHO05D006038 2.9e-06 57.0 108 32.4
Os08g0243100 Oryza sativa ssp. japonica HOM05D005118 ORTHO05D006038 2.9e-06 57.0 199 23.6
SGA_v2.0_scaffold31G12903 Striga asiatica HOM05D005118 ORTHO05D006038 2.9e-06 57.0 199 25.1
COL.COLO4_29702 Corchorus olitorius HOM05D005118 ORTHO05D006038 3.8e-06 56.6 157 25.5
CANSAT64G1535 Cannabis sativa HOM05D005118 ORTHO05D006038 5.0e-06 56.2 157 24.2
ClCG05G021770 Citrullus lanatus HOM05D007318 ORTHO05D009289 5.0e-06 56.2 39 64.1
ECA247G3083 Erigeron canadensis HOM05D005118 ORTHO05D006038 6.5e-06 55.8 160 26.9
FvH4_6g19140 Fragaria vesca HOM05D005118 ORTHO05D006038 6.5e-06 55.8 156 26.9
FAN09G1525 Fragaria x ananassa HOM05D005118 ORTHO05D006038 6.5e-06 55.8 159 26.4
FAN14G1754 Fragaria x ananassa HOM05D005118 ORTHO05D006038 6.5e-06 55.8 156 26.9
Lalb_Chr10g0096391 Lupinus albus HOM05D005118 ORTHO05D006038 6.5e-06 55.8 159 25.2
Sabra06G0162900 Salix brachista HOM05D005118 ORTHO05D006038 6.5e-06 55.8 160 25.6
FAN02G2546 Fragaria x ananassa HOM05D005118 ORTHO05D006038 8.5e-06 55.5 161 25.5
FAN05G3536 Fragaria x ananassa HOM05D005118 ORTHO05D006038 8.5e-06 55.5 159 26.4
Nn2g14484 Nelumbo nucifera HOM05D005118 ORTHO05D006038 8.5e-06 55.5 158 28.5
Potri.006G211300 Populus trichocarpa HOM05D005118 ORTHO05D006038 8.5e-06 55.5 160 25.6
Rhsim03G0072700 Rhododendron simsii HOM05D005118 ORTHO05D006038 8.5e-06 55.5 162 25.9


User provided reference genes

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