Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_018876 Daucus carota HOM05D006317 ORTHO05D007852 1.3e-32 142.5 77 100.0
FvH4_2g27730 Fragaria vesca HOM05D006317 ORTHO05D007852 2.5e-26 121.7 69 92.8
FAN20G1754 Fragaria x ananassa HOM05D006317 ORTHO05D007852 2.5e-26 121.7 69 92.8
FAN24G3505 Fragaria x ananassa HOM05D006317 ORTHO05D007852 2.5e-26 121.7 69 92.8
FAN27G3154 Fragaria x ananassa HOM05D006317 ORTHO05D007852 1.2e-25 119.4 69 89.9
Lalb_Chr08g0241161 Lupinus albus HOM05D006317 ORTHO05D007852 1.2e-25 119.4 69 89.9
CSS0006686 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 2.1e-25 118.6 69 88.4
Hma1.2p1_0420F.1_g149670 Hydrangea macrophylla HOM05D006317 ORTHO05D007852 2.1e-25 118.6 69 88.4
Dinv27277 Davidia involucrata HOM05D006317 ORTHO05D007852 2.7e-25 118.2 69 88.4
Gohir.A05G237800 Gossypium hirsutum HOM05D006317 ORTHO05D007852 3.5e-25 117.9 69 89.9
Gohir.D05G239800 Gossypium hirsutum HOM05D006317 ORTHO05D007852 3.5e-25 117.9 69 89.9
Gorai.009G248700 Gossypium raimondii HOM05D006317 ORTHO05D007852 3.5e-25 117.9 69 89.9
CiPaw.15G032500 Carya illinoinensis HOM05D006317 ORTHO05D007852 1.0e-24 116.3 69 87.0
ClCG08G005990 Citrullus lanatus HOM05D006317 ORTHO05D007852 1.0e-24 116.3 70 85.7
CSS0008085 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 1.3e-24 115.9 69 85.5
CSS0027136 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 1.3e-24 115.9 69 85.5
Carub.0002s2423 Capsella rubella HOM05D006317 ORTHO05D007852 1.8e-24 115.5 69 85.5
Rhsim11G0071000 Rhododendron simsii HOM05D006317 ORTHO05D007852 1.8e-24 115.5 69 85.5
Lj1g0010212 Lotus japonicus HOM05D006317 ORTHO05D007852 2.3e-24 115.2 69 85.5
MELO3C010655.2 Cucumis melo HOM05D006317 ORTHO05D007852 3.0e-24 114.8 69 87.0
Actinidia29484 Actinidia chinensis HOM05D006317 ORTHO05D007852 3.9e-24 114.4 69 87.0
Eucgr.D00248 Eucalyptus grandis HOM05D006317 ORTHO05D007852 3.9e-24 114.4 69 84.1
TWI32G0551 Tripterygium wilfordii HOM05D006317 ORTHO05D007852 3.9e-24 114.4 69 87.0
TAR375G0871 Trochodendron aralioides HOM05D006317 ORTHO05D007852 3.9e-24 114.4 69 85.5
CARHR070830 Cardamine hirsuta HOM05D006317 ORTHO05D007852 5.1e-24 114.0 69 84.1
THA.LOC104813677 Tarenaya hassleriana HOM05D006317 ORTHO05D007852 5.1e-24 114.0 69 85.5
RcHm_v2.0_Chr6g0296581 Rosa chinensis HOM05D006317 ORTHO05D007852 6.7e-24 113.6 69 87.0
vmacro00858 Vaccinium macrocarpon HOM05D006317 ORTHO05D007852 6.7e-24 113.6 69 85.5
Psat5g085080 Pisum sativum HOM05D006317 ORTHO05D007852 8.7e-24 113.2 69 85.5
Aa31LG4G7370 Aethionema arabicum HOM05D006317 ORTHO05D007852 1.1e-23 112.8 69 84.1
arahy.Tifrunner.gnm1.ann1.0GY0RD Arachis hypogaea HOM05D006317 ORTHO05D007852 1.1e-23 112.8 69 85.5
arahy.Tifrunner.gnm1.ann1.ID1H8K Arachis hypogaea HOM05D006317 ORTHO05D007852 1.1e-23 112.8 69 85.5
Thhalv10019323m.g Eutrema salsugineum HOM05D006317 ORTHO05D007852 1.1e-23 112.8 69 84.1
Manes.18G081900 Manihot esculenta HOM05D006317 ORTHO05D007852 1.1e-23 112.8 68 86.8
Medtr3g088525 Medicago truncatula HOM05D006317 ORTHO05D007852 1.1e-23 112.8 69 84.1
Phvul.009G129100 Phaseolus vulgaris HOM05D006317 ORTHO05D007852 1.1e-23 112.8 69 85.5
Sed0004620 Sechium edule HOM05D006317 ORTHO05D007852 1.1e-23 112.8 69 84.1
Sed0014816 Sechium edule HOM05D006317 ORTHO05D007852 1.1e-23 112.8 69 85.5
Duzib116G0606 Durio zibethinus HOM05D006317 ORTHO05D007852 1.9e-23 112.1 69 84.1
Glyma.04G246100 Glycine max HOM05D006317 ORTHO05D007852 1.9e-23 112.1 69 84.1
Lalb_Chr23g0271161 Lupinus albus HOM05D006317 ORTHO05D007852 1.9e-23 112.1 69 84.1
Manes.02G167400 Manihot esculenta HOM05D006317 ORTHO05D007852 1.9e-23 112.1 68 85.3
Prupe.1G490600 Prunus persica HOM05D006317 ORTHO05D007852 1.9e-23 112.1 69 85.5
TWI34G0863 Tripterygium wilfordii HOM05D006317 ORTHO05D007852 1.9e-23 112.1 69 85.5
AL2G37550 Arabidopsis lyrata HOM05D006317 ORTHO05D007852 2.5e-23 111.7 71 83.1
CsaV3_6G034090 Cucumis sativus L. HOM05D006317 ORTHO05D007852 2.5e-23 111.7 69 84.1
CDE07G1891 Ceratophyllum demersum HOM05D006317 ORTHO05D007852 3.3e-23 111.3 69 84.1
Dinv14667 Davidia involucrata HOM05D006317 ORTHO05D007852 3.3e-23 111.3 68 85.3
Duzib041G0795 Durio zibethinus HOM05D006317 ORTHO05D007852 3.3e-23 111.3 69 84.1
Sc10g0008060 Simmondsia chinensis HOM05D006317 ORTHO05D007852 3.3e-23 111.3 69 82.6
Thecc.08G132100 Theobroma cacao HOM05D006317 ORTHO05D007852 3.3e-23 111.3 69 84.1
VMungo1309G0699 Vigna mungo HOM05D006317 ORTHO05D007852 3.3e-23 111.3 69 85.5
Ciclev10002865m.g Citrus clementina HOM05D006317 ORTHO05D007852 4.3e-23 110.9 69 82.6
Lsat_1_v5_gn_6_109060 Lactuca sativa HOM05D006317 ORTHO05D007852 4.3e-23 110.9 69 84.1
Solyc11g005000.2 Solanum lycopersicum HOM05D006317 ORTHO05D007852 5.7e-23 110.5 69 79.7
vmacro16444 Vaccinium macrocarpon HOM05D006317 ORTHO05D007852 5.7e-23 110.5 67 86.6
Atru.chr13.1550 Acer truncatum HOM05D006317 ORTHO05D007852 7.4e-23 110.2 69 82.6
MSTRG.25364 Avicennia marina HOM05D006317 ORTHO05D007852 7.4e-23 110.2 69 81.2
Cc10_g12550 Coffea canephora HOM05D006317 ORTHO05D007852 7.4e-23 110.2 69 81.2
COL.COLO4_05688 Corchorus olitorius HOM05D006317 ORTHO05D007852 7.4e-23 110.2 69 82.6
PGSC0003DMG400006049 Solanum tuberosum HOM05D006317 ORTHO05D007852 7.4e-23 110.2 69 81.2
Cfa018120 Carpinus fangiana HOM05D006317 ORTHO05D007852 9.6e-23 109.8 69 81.2
Migut.N03266 Erythranthe guttata HOM05D006317 ORTHO05D007852 9.6e-23 109.8 69 82.6
Glyma.06G116700 Glycine max HOM05D006317 ORTHO05D007852 9.6e-23 109.8 69 82.6
BcaB07g32159 Brassica carinata HOM05D006317 ORTHO05D007852 1.3e-22 109.4 69 81.2
QL09p032738 Quercus lobata HOM05D006317 ORTHO05D007852 1.3e-22 109.4 69 81.2
Sopen11g001020 Solanum pennellii HOM05D006317 ORTHO05D007852 1.3e-22 109.4 69 78.3
GSVIVG01036785001 Vitis vinifera HOM05D006317 ORTHO05D007852 1.3e-22 109.4 69 82.6
A06p17730 Brassica napus HOM05D006317 ORTHO05D007852 1.6e-22 109.0 69 81.2
ECA246G3352 Erigeron canadensis HOM05D006317 ORTHO05D007852 1.6e-22 109.0 68 83.8
Peaxi162Scf01003g00121 Petunia axillaris HOM05D006317 ORTHO05D007852 1.6e-22 109.0 69 79.7
AT1G77350 Arabidopsis thaliana HOM05D006317 ORTHO05D007852 2.1e-22 108.6 70 81.4
Nn1g09356 Nelumbo nucifera HOM05D006317 ORTHO05D007852 2.1e-22 108.6 69 79.7
PGR044G1554 Punica granatum HOM05D006317 ORTHO05D007852 2.1e-22 108.6 69 82.6
BraA06t24865Z Brassica rapa HOM05D006317 ORTHO05D007852 2.8e-22 108.2 69 79.7
Cpa.g.sc64.145 Carica papaya HOM05D006317 ORTHO05D007852 2.8e-22 108.2 69 81.2
CDE06G2198 Ceratophyllum demersum HOM05D006317 ORTHO05D007852 2.8e-22 108.2 69 81.2
CANSAT35G0412 Cannabis sativa HOM05D006317 ORTHO05D007852 3.7e-22 107.8 69 82.6
Potri.019G066600 Populus trichocarpa HOM05D006317 ORTHO05D007852 3.7e-22 107.8 68 82.4
CAN.G342.14 Capsicum annuum HOM05D006317 ORTHO05D007852 4.8e-22 107.5 69 78.3
Nitab4.5_0001168g0010 Nicotiana tabacum HOM05D006317 ORTHO05D007852 4.8e-22 107.5 69 78.3
unitig_22.g5398 Utricularia gibba HOM05D006317 ORTHO05D007852 4.8e-22 107.5 69 81.2
A08p28870 Brassica napus HOM05D006317 ORTHO05D007852 6.3e-22 107.1 69 82.6
BraA08t34818Z Brassica rapa HOM05D006317 ORTHO05D007852 6.3e-22 107.1 69 82.6
BcaC06g34898 Brassica carinata HOM05D006317 ORTHO05D007852 1.1e-21 106.3 68 80.9
A07p14980 Brassica napus HOM05D006317 ORTHO05D007852 1.1e-21 106.3 68 80.9
BolC7t42733H Brassica oleracea HOM05D006317 ORTHO05D007852 1.1e-21 106.3 68 80.9
BraA07t29244Z Brassica rapa HOM05D006317 ORTHO05D007852 1.1e-21 106.3 68 80.9
Nitab4.5_0002045g0100 Nicotiana tabacum HOM05D006317 ORTHO05D007852 1.8e-21 105.5 69 76.8
Sp1g19190 Schrenkiella parvula HOM05D006317 ORTHO05D007852 1.8e-21 105.5 68 79.4
BcaB03g14259 Brassica carinata HOM05D006317 ORTHO05D007852 2.4e-21 105.1 69 78.3
Oeu021883.1 Olea europaea HOM05D006317 ORTHO05D007852 2.4e-21 105.1 69 78.3
SalBow2G0856 Salvia bowleyana HOM05D006317 ORTHO05D007852 2.4e-21 105.1 69 79.7
C07p22030 Brassica napus HOM05D006317 ORTHO05D007852 3.1e-21 104.8 67 80.6
Oeu051968.1 Olea europaea HOM05D006317 ORTHO05D007852 3.1e-21 104.8 69 79.7
Aqoxy1G01739 Aquilegia oxysepala HOM05D006317 ORTHO05D007852 4.1e-21 104.4 69 78.3
C08p20980 Brassica napus HOM05D006317 ORTHO05D007852 4.1e-21 104.4 69 79.7
BolC8t49735H Brassica oleracea HOM05D006317 ORTHO05D007852 4.1e-21 104.4 69 79.7
SGA_v2.0_scaffold25G11134 Striga asiatica HOM05D006317 ORTHO05D007852 4.1e-21 104.4 69 78.3
ATR1101G062 Amborella trichopoda HOM05D006317 ORTHO05D007852 6.9e-21 103.6 68 77.9
MBI03_g35425_MAGBIO Magnolia biondii HOM05D006317 ORTHO05D007852 6.9e-21 103.6 69 75.4
unitig_8.g3836 Utricularia gibba HOM05D006317 ORTHO05D007852 6.9e-21 103.6 69 76.8
EL10Ac9g21899 Beta vulgaris HOM05D006317 ORTHO05D007852 9.0e-21 103.2 69 76.8
HanXRQChr05g0148711 Helianthus annuus HOM05D006317 ORTHO05D007852 9.0e-21 103.2 62 87.1
Thhalv10009123m.g Eutrema salsugineum HOM05D006317 ORTHO05D007852 1.2e-20 102.8 70 78.6
Sabra19G0078300 Salix brachista HOM05D006317 ORTHO05D007852 5.9e-20 100.5 74 75.7
Ah.01g020580 Amaranthus hybridus HOM05D006317 ORTHO05D007852 1.3e-19 99.4 69 72.5
AUR62016336 Chenopodium quinoa HOM05D006317 ORTHO05D007852 2.9e-19 98.2 69 72.5
Zm00001eb128810 Zea mays HOM05D006317 ORTHO05D007852 1.4e-18 95.9 69 73.9
Os05g0486200 Oryza sativa ssp. japonica HOM05D006317 ORTHO05D007852 1.9e-18 95.5 65 76.9
HPP92_021212 Vanilla planifolia HOM05D006317 ORTHO05D007852 5.5e-18 94.0 67 73.1
AagrBONN_evm.TU.Sc2ySwM_344.4689 Anthoceros agrestis HOM05D006317 ORTHO05D007852 6.1e-17 90.5 69 65.2
Mapoly0014s0111 Marchantia polymorpha HOM05D006317 ORTHO05D007852 1.3e-16 89.4 69 65.2
CSS0043705 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 3.9e-16 87.8 47 87.2
SHI09189 Sapria himalayana HOM05D006317 ORTHO05D007852 1.9e-15 85.5 80 62.5
Gohir.A02G071601 Gossypium hirsutum HOM05D006317 ORTHO05D007852 3.3e-15 84.7 58 81.0
CBR_g12067 Chara braunii HOM05D006317 ORTHO05D007852 6.3e-14 80.5 71 62.0
MBI06_g36652_MAGBIO Magnolia biondii HOM05D006317 ORTHO05D007852 1.4e-13 79.3 69 65.2
SMO298G0052 Selaginella moellendorffii HOM05D006317 ORTHO05D007852 1.2e-12 76.3 63 65.1
BcaB03g14260 Brassica carinata HOM05D006317 ORTHO05D007852 2.6e-12 75.1 78 57.7
Nn7g37402 Nelumbo nucifera HOM05D006317 ORTHO05D007852 3.4e-12 74.7 46 73.9
SGA_v2.0_scaffold28G11977 Striga asiatica HOM05D006317 ORTHO05D007852 1.3e-11 72.8 52 78.8
BolC5t30761H Brassica oleracea HOM05D006317 ORTHO05D007852 2.9e-11 71.6 52 75.0
BcaC05g26083 Brassica carinata HOM05D006317 ORTHO05D007852 2.8e-06 55.1 49 65.3


User provided reference genes

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