Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_018854 Daucus carota HOM05D000137 ORTHO05D178141 6.5e-108 394.0 196 100.0
Nn2g10618 Nelumbo nucifera HOM05D000137 ORTHO05D000382 2.0e-08 63.5 50 54.0
Manes.02G018000 Manihot esculenta HOM05D000137 ORTHO05D000382 3.4e-08 62.8 61 50.8
EL10Ac9g22395 Beta vulgaris HOM05D000137 ORTHO05D000382 5.9e-08 62.0 50 54.0
Manes.01G058000 Manihot esculenta HOM05D000137 ORTHO05D000382 1.0e-07 61.2 57 50.9
Ah.05g180280 Amaranthus hybridus HOM05D000137 ORTHO05D000382 1.3e-07 60.8 68 42.6
MSTRG.11960 Avicennia marina HOM05D000137 ORTHO05D000382 1.3e-07 60.8 60 50.0
Thecc.03G285200 Theobroma cacao HOM05D000137 ORTHO05D000382 1.3e-07 60.8 43 58.1
Ah.01g002420 Amaranthus hybridus HOM05D000137 ORTHO05D000382 1.7e-07 60.5 50 52.0
CANSAT21G0684 Cannabis sativa HOM05D000137 ORTHO05D000382 1.7e-07 60.5 56 53.6
CANSAT21G1540 Cannabis sativa HOM05D000137 ORTHO05D000382 1.7e-07 60.5 56 53.6
Ciclev10020645m.g Citrus clementina HOM05D000137 ORTHO05D000382 1.7e-07 60.5 59 50.8
TAR369G0840 Trochodendron aralioides HOM05D000137 ORTHO05D000382 1.7e-07 60.5 41 58.5
Cpa.g.sc184.17 Carica papaya HOM05D000137 ORTHO05D000382 2.2e-07 60.1 43 58.1
Gohir.A08G132100 Gossypium hirsutum HOM05D000137 ORTHO05D000382 2.2e-07 60.1 62 46.8
Sabra02G0129300 Salix brachista HOM05D000137 ORTHO05D000382 2.2e-07 60.1 43 58.1
Aa31LG5G710 Aethionema arabicum HOM05D000137 ORTHO05D000386 2.9e-07 59.7 43 58.1
CSS0013507 Camellia sinensis var. sinensis HOM05D000137 ORTHO05D000382 2.9e-07 59.7 43 58.1
DCAR_008627 Daucus carota HOM05D000137 ORTHO05D000382 2.9e-07 59.7 43 58.1
vmacro13246 Vaccinium macrocarpon HOM05D000137 ORTHO05D000382 2.9e-07 59.7 59 47.5
vmacro14489 Vaccinium macrocarpon HOM05D000137 ORTHO05D000382 2.9e-07 59.7 57 50.9
CSS0019215 Camellia sinensis var. sinensis HOM05D000137 ORTHO05D000382 3.8e-07 59.3 54 46.3
CSS0019707 Camellia sinensis var. sinensis HOM05D000137 ORTHO05D000382 3.8e-07 59.3 54 46.3
AUR62004396 Chenopodium quinoa HOM05D000137 ORTHO05D000382 3.8e-07 59.3 68 42.6
Cc01_g11870 Coffea canephora HOM05D000137 ORTHO05D000382 3.8e-07 59.3 57 43.9
COL.COLO4_12757 Corchorus olitorius HOM05D000137 ORTHO05D000382 3.8e-07 59.3 43 58.1
ECA236G3871 Erigeron canadensis HOM05D000137 ORTHO05D000382 3.8e-07 59.3 47 53.2
Eucgr.E00103 Eucalyptus grandis HOM05D000137 ORTHO05D000382 3.8e-07 59.3 43 58.1
Thhalv10028738m.g Eutrema salsugineum HOM05D000137 ORTHO05D000382 3.8e-07 59.3 43 58.1
Hma1.2p1_2042F.1_g312220 Hydrangea macrophylla HOM05D000137 ORTHO05D000382 3.8e-07 59.3 54 51.9
Lsat_1_v5_gn_9_21161 Lactuca sativa HOM05D000137 ORTHO05D000382 3.8e-07 59.3 47 53.2
Potri.002G162500 Populus trichocarpa HOM05D000137 ORTHO05D000382 3.8e-07 59.3 43 58.1
Rhsim07G0011800 Rhododendron simsii HOM05D000137 ORTHO05D000382 3.8e-07 59.3 59 47.5
THA.LOC104825854 Tarenaya hassleriana HOM05D000137 ORTHO05D000382 3.8e-07 59.3 43 58.1
Dinv43848 Davidia involucrata HOM05D000137 ORTHO05D000382 5.0e-07 58.9 55 49.1
Lj7A509T110 Lonicera japonica HOM05D000137 ORTHO05D000382 5.0e-07 58.9 54 50.0
PSO384G2095 Papaver somniferum HOM05D000137 ORTHO05D000382 5.0e-07 58.9 61 44.3
Phvul.010G102800 Phaseolus vulgaris HOM05D000137 ORTHO05D000382 5.0e-07 58.9 43 53.5
SalBow3G4117 Salvia bowleyana HOM05D000137 ORTHO05D000382 5.0e-07 58.9 57 45.6
VMungo0331G1018 Vigna mungo HOM05D000137 ORTHO05D000382 5.0e-07 58.9 43 53.5
Zm00001eb393610 Zea mays HOM05D000137 ORTHO05D000382 5.0e-07 58.9 43 60.5
Atru.chr5.543 Acer truncatum HOM05D000137 ORTHO05D000382 6.5e-07 58.5 59 49.2
Aqoxy5G04025 Aquilegia oxysepala HOM05D000137 ORTHO05D000382 6.5e-07 58.5 78 39.7
CiPaw.02G033600 Carya illinoinensis HOM05D000137 ORTHO05D000382 6.5e-07 58.5 43 55.8
ClCG01G002400 Citrullus lanatus HOM05D000137 ORTHO05D000382 6.5e-07 58.5 56 51.8
Dinv06349 Davidia involucrata HOM05D000137 ORTHO05D000382 6.5e-07 58.5 54 48.1
FvH4_7g15060 Fragaria vesca HOM05D000137 ORTHO05D000382 6.5e-07 58.5 43 55.8
FAN01G1282 Fragaria x ananassa HOM05D000137 ORTHO05D000382 6.5e-07 58.5 43 55.8
FAN03G2229 Fragaria x ananassa HOM05D000137 ORTHO05D000382 6.5e-07 58.5 43 55.8
FAN06G2214 Fragaria x ananassa HOM05D000137 ORTHO05D000382 6.5e-07 58.5 43 55.8
FAN06G2783 Fragaria x ananassa HOM05D000137 ORTHO05D000382 6.5e-07 58.5 43 55.8
FAN10G0872 Fragaria x ananassa HOM05D000137 ORTHO05D000382 6.5e-07 58.5 43 55.8
FAN10G4227 Fragaria x ananassa HOM05D000137 ORTHO05D000382 6.5e-07 58.5 43 55.8
MD00G1111900 Malus domestica HOM05D000137 ORTHO05D000382 6.5e-07 58.5 43 55.8
Manes.01G253700 Manihot esculenta HOM05D000137 ORTHO05D000382 6.5e-07 58.5 59 47.5
Potri.001G099900 Populus trichocarpa HOM05D000137 ORTHO05D000382 6.5e-07 58.5 43 60.5
RcHm_v2.0_Chr1g0357171 Rosa chinensis HOM05D000137 ORTHO05D000382 6.5e-07 58.5 43 55.8
TWI14G0075 Tripterygium wilfordii HOM05D000137 ORTHO05D000382 6.5e-07 58.5 43 55.8
Cpa.g.sc139.35 Carica papaya HOM05D000137 ORTHO05D000382 8.5e-07 58.2 40 60.0
CDE07G0440 Ceratophyllum demersum HOM05D000137 ORTHO05D000382 8.5e-07 58.2 44 54.5
Ca_23594_v3 Cicer arietinum L. HOM05D000137 ORTHO05D000382 8.5e-07 58.2 43 53.5
Cc00_g17870 Coffea canephora HOM05D000137 ORTHO05D000382 8.5e-07 58.2 43 53.5
MELO3C005705.2 Cucumis melo HOM05D000137 ORTHO05D000382 8.5e-07 58.2 59 47.5
CsaV3_5G002510 Cucumis sativus L. HOM05D000137 ORTHO05D000382 8.5e-07 58.2 59 47.5
Eucgr.E00652 Eucalyptus grandis HOM05D000137 ORTHO05D000382 8.5e-07 58.2 43 58.1
Glyma.07G066800 Glycine max HOM05D000137 ORTHO05D000382 8.5e-07 58.2 43 53.5
Glyma.16G032900 Glycine max HOM05D000137 ORTHO05D000382 8.5e-07 58.2 43 53.5
MBI04_g06629_MAGBIO Magnolia biondii HOM05D000137 ORTHO05D000382 8.5e-07 58.2 43 53.5
Manes.05G031200 Manihot esculenta HOM05D000137 ORTHO05D000382 8.5e-07 58.2 43 55.8
PSO339G0216 Papaver somniferum HOM05D000137 ORTHO05D000382 8.5e-07 58.2 56 46.4
Potri.003G131800 Populus trichocarpa HOM05D000137 ORTHO05D000382 8.5e-07 58.2 43 58.1
QL04p054966 Quercus lobata HOM05D000137 ORTHO05D000382 8.5e-07 58.2 43 53.5
Sed0010730 Sechium edule HOM05D000137 ORTHO05D000382 8.5e-07 58.2 59 52.5
Thecc.01G354600 Theobroma cacao HOM05D000137 ORTHO05D000382 8.5e-07 58.2 43 55.8
TAR629G1276 Trochodendron aralioides HOM05D000137 ORTHO05D000382 8.5e-07 58.2 54 51.9
GSVIVG01019406001 Vitis vinifera HOM05D000137 ORTHO05D000382 8.5e-07 58.2 43 55.8
arahy.Tifrunner.gnm1.ann1.BC5GM2 Arachis hypogaea HOM05D000137 ORTHO05D000382 1.1e-06 57.8 43 53.5
arahy.Tifrunner.gnm1.ann1.L410JY Arachis hypogaea HOM05D000137 ORTHO05D000382 1.1e-06 57.8 43 53.5
Cfa003888 Carpinus fangiana HOM05D000137 ORTHO05D000382 1.1e-06 57.8 45 53.3
Ciclev10028684m.g Citrus clementina HOM05D000137 ORTHO05D000382 1.1e-06 57.8 50 46.0
MELO3C021187.2 Cucumis melo HOM05D000137 ORTHO05D000382 1.1e-06 57.8 43 51.2
CsaV3_6G000830 Cucumis sativus L. HOM05D000137 ORTHO05D000382 1.1e-06 57.8 43 51.2
HanXRQChr06g0175501 Helianthus annuus HOM05D000137 ORTHO05D000382 1.1e-06 57.8 57 43.9
PGR042G1440 Punica granatum HOM05D000137 ORTHO05D000382 1.1e-06 57.8 43 55.8
PGR042G1912 Punica granatum HOM05D000137 ORTHO05D000382 1.1e-06 57.8 43 58.1
Sc01g0003310 Simmondsia chinensis HOM05D000137 ORTHO05D000382 1.1e-06 57.8 68 42.6
TWI23G0658 Tripterygium wilfordii HOM05D000137 ORTHO05D000382 1.1e-06 57.8 43 55.8
Actinidia33735 Actinidia chinensis HOM05D000137 ORTHO05D014737 1.4e-06 57.4 61 45.9
Actinidia37281 Actinidia chinensis HOM05D000137 ORTHO05D000382 1.4e-06 57.4 43 53.5
CANSAT56G4075 Cannabis sativa HOM05D000137 ORTHO05D000382 1.4e-06 57.4 43 51.2
CARHR248970 Cardamine hirsuta HOM05D000137 ORTHO05D000382 1.4e-06 57.4 54 48.1
AUR62022602 Chenopodium quinoa HOM05D000137 ORTHO05D000382 1.4e-06 57.4 41 56.1
Duzib138G0345 Durio zibethinus HOM05D000137 ORTHO05D000382 1.4e-06 57.4 43 55.8
Nitab4.5_0004465g0050 Nicotiana tabacum HOM05D000137 ORTHO05D000382 1.4e-06 57.4 51 49.0
Sed0020796 Sechium edule HOM05D000137 ORTHO05D000382 1.4e-06 57.4 43 51.2
AL6G52040 Arabidopsis lyrata HOM05D000137 ORTHO05D000382 1.9e-06 57.0 43 55.8
Carub.0006s3641 Capsella rubella HOM05D000137 ORTHO05D000382 1.9e-06 57.0 43 55.8
CDE04G0662 Ceratophyllum demersum HOM05D000137 ORTHO05D000382 1.9e-06 57.0 44 52.3
Ciclev10020633m.g Citrus clementina HOM05D000137 ORTHO05D000382 1.9e-06 57.0 56 50.0
COL.COLO4_08374 Corchorus olitorius HOM05D000137 ORTHO05D000382 1.9e-06 57.0 43 55.8
Duzib068G0212 Durio zibethinus HOM05D000137 ORTHO05D000382 1.9e-06 57.0 43 55.8
Gohir.D07G146400 Gossypium hirsutum HOM05D000137 ORTHO05D000382 1.9e-06 57.0 43 58.1
Gohir.D08G153500 Gossypium hirsutum HOM05D000137 ORTHO05D000382 1.9e-06 57.0 62 45.2
Gorai.004G159400 Gossypium raimondii HOM05D000137 ORTHO05D000382 1.9e-06 57.0 62 45.2
MBI14_g13371_MAGBIO Magnolia biondii HOM05D000137 ORTHO05D000382 1.9e-06 57.0 50 52.0
Os10g0533600 Oryza sativa ssp. japonica HOM05D000137 ORTHO05D000382 1.9e-06 57.0 43 58.1
Prupe.5G105500 Prunus persica HOM05D000137 ORTHO05D000382 1.9e-06 57.0 56 50.0
Sp6g00790 Schrenkiella parvula HOM05D000137 ORTHO05D000382 1.9e-06 57.0 43 55.8
GSVIVG01025091001 Vitis vinifera HOM05D000137 ORTHO05D000382 1.9e-06 57.0 41 53.7
ATR0594G037 Amborella trichopoda HOM05D000137 ORTHO05D000382 2.5e-06 56.6 41 56.1
MSTRG.21159 Avicennia marina HOM05D000137 ORTHO05D000382 2.5e-06 56.6 57 45.6
CAN.G84.26 Capsicum annuum HOM05D000137 ORTHO05D000382 2.5e-06 56.6 41 56.1
Haze_15546 Corylus avellana HOM05D000137 ORTHO05D000382 2.5e-06 56.6 45 51.1
Gohir.A12G233900 Gossypium hirsutum HOM05D000137 ORTHO05D000382 2.5e-06 56.6 43 55.8
Gohir.D12G233400 Gossypium hirsutum HOM05D000137 ORTHO05D000382 2.5e-06 56.6 43 55.8
Gorai.008G249800 Gossypium raimondii HOM05D000137 ORTHO05D000382 2.5e-06 56.6 43 55.8
HanXRQChr06g0167011 Helianthus annuus HOM05D000137 ORTHO05D000382 2.5e-06 56.6 43 55.8
MD14G1110400 Malus domestica HOM05D000137 ORTHO05D000382 2.5e-06 56.6 54 50.0
Medtr7g078690 Medicago truncatula HOM05D000137 ORTHO05D000382 2.5e-06 56.6 43 53.5
Medtr8g028720 Medicago truncatula HOM05D000137 ORTHO05D000382 2.5e-06 56.6 43 51.2
Psat4g156640 Pisum sativum HOM05D000137 ORTHO05D000382 2.5e-06 56.6 43 51.2
Sc23g0002680 Simmondsia chinensis HOM05D000137 ORTHO05D000382 2.5e-06 56.6 42 54.8
TPR.G19394 Trifolium pratense HOM05D000137 ORTHO05D000382 2.5e-06 56.6 43 51.2
TPR.G22294 Trifolium pratense HOM05D000137 ORTHO05D000382 2.5e-06 56.6 43 53.5
TPR.G2985 Trifolium pratense HOM05D000137 ORTHO05D000382 2.5e-06 56.6 46 45.7
Atru.chr9.2132 Acer truncatum HOM05D000137 ORTHO05D000382 3.2e-06 56.2 43 55.8
ClCG06G003480 Citrullus lanatus HOM05D000137 ORTHO05D000382 3.2e-06 56.2 43 51.2
Gohir.A03G020500 Gossypium hirsutum HOM05D000137 ORTHO05D000382 3.2e-06 56.2 43 55.8
Gohir.D03G148200 Gossypium hirsutum HOM05D000137 ORTHO05D000382 3.2e-06 56.2 43 55.8
Gorai.001G158800 Gossypium raimondii HOM05D000137 ORTHO05D000382 3.2e-06 56.2 43 58.1
Gorai.001G159000 Gossypium raimondii HOM05D000137 ORTHO05D000382 3.2e-06 56.2 43 58.1
Gorai.003G155700 Gossypium raimondii HOM05D000137 ORTHO05D000382 3.2e-06 56.2 43 55.8
Prupe.2G175200 Prunus persica HOM05D000137 ORTHO05D000382 3.2e-06 56.2 43 53.5
Sed0011407 Sechium edule HOM05D000137 ORTHO05D000382 3.2e-06 56.2 43 51.2
THA.LOC104817028 Tarenaya hassleriana HOM05D000137 ORTHO05D000382 3.2e-06 56.2 43 55.8
TWI59G1073 Tripterygium wilfordii HOM05D000137 ORTHO05D000382 3.2e-06 56.2 43 55.8
Actinidia27368 Actinidia chinensis HOM05D000137 ORTHO05D000382 4.2e-06 55.8 56 46.4
arahy.Tifrunner.gnm1.ann1.WCN1YP Arachis hypogaea HOM05D000137 ORTHO05D000382 4.2e-06 55.8 43 51.2
arahy.Tifrunner.gnm1.ann1.YDHQ7Y Arachis hypogaea HOM05D000137 ORTHO05D000382 4.2e-06 55.8 43 51.2
CANSAT54G2958 Cannabis sativa HOM05D000137 ORTHO05D000382 4.2e-06 55.8 41 56.1
CiPaw.14G075800 Carya illinoinensis HOM05D000137 ORTHO05D000382 4.2e-06 55.8 41 51.2
COL.COLO4_18391 Corchorus olitorius HOM05D000137 ORTHO05D000382 4.2e-06 55.8 41 51.2
Duzib268G1501 Durio zibethinus HOM05D000137 ORTHO05D000382 4.2e-06 55.8 43 55.8
Gohir.D07G146632 Gossypium hirsutum HOM05D000137 ORTHO05D000382 4.2e-06 55.8 43 58.1
Lsat_1_v5_gn_3_137680 Lactuca sativa HOM05D000137 ORTHO05D000382 4.2e-06 55.8 56 48.2
Lsat_1_v5_gn_3_138401 Lactuca sativa HOM05D000137 ORTHO05D000382 4.2e-06 55.8 56 48.2
Oeu058508.1 Olea europaea HOM05D000137 ORTHO05D000382 4.2e-06 55.8 51 49.0
Os08g0157000 Oryza sativa ssp. japonica HOM05D000137 ORTHO05D000382 4.2e-06 55.8 44 54.5
QL01p035556 Quercus lobata HOM05D000137 ORTHO05D000382 4.2e-06 55.8 46 47.8
QL12p031977 Quercus lobata HOM05D000137 ORTHO05D000382 4.2e-06 55.8 58 46.6
Sabra03G0094200 Salix brachista HOM05D000137 ORTHO05D000382 4.2e-06 55.8 43 53.5
Sabra14G0064300 Salix brachista HOM05D000137 ORTHO05D014737 4.2e-06 55.8 43 55.8
Sed0006627 Sechium edule HOM05D000137 ORTHO05D000382 4.2e-06 55.8 56 51.8
Hund16664 Selenicereus undatus HOM05D000137 ORTHO05D000382 4.2e-06 55.8 42 52.4
TWI79G1779 Tripterygium wilfordii HOM05D000137 ORTHO05D000382 4.2e-06 55.8 40 57.5
HPP92_008922 Vanilla planifolia HOM05D000137 ORTHO05D014737 4.2e-06 55.8 62 43.5
CSS0033162 Camellia sinensis var. sinensis HOM05D000137 ORTHO05D000382 5.5e-06 55.5 59 44.1
Ca_00822_v3 Cicer arietinum L. HOM05D000137 ORTHO05D000382 5.5e-06 55.5 43 51.2
ECA236G2597 Erigeron canadensis HOM05D000137 ORTHO05D000382 5.5e-06 55.5 43 55.8
Gohir.A05G100000 Gossypium hirsutum HOM05D000137 ORTHO05D000382 5.5e-06 55.5 41 51.2
Gohir.D05G099800 Gossypium hirsutum HOM05D000137 ORTHO05D000382 5.5e-06 55.5 41 51.2
Gorai.009G103800 Gossypium raimondii HOM05D000137 ORTHO05D000382 5.5e-06 55.5 41 51.2
HanXRQChr08g0230171 Helianthus annuus HOM05D000137 ORTHO05D000382 5.5e-06 55.5 47 51.1
Nn6g33297 Nelumbo nucifera HOM05D000137 ORTHO05D000382 5.5e-06 55.5 43 53.5
Solyc11g072630.2 Solanum lycopersicum HOM05D000137 ORTHO05D000382 5.5e-06 55.5 53 47.2
Sopen11g030300 Solanum pennellii HOM05D000137 ORTHO05D000382 5.5e-06 55.5 53 47.2
TAR623G0110 Trochodendron aralioides HOM05D000137 ORTHO05D000382 5.5e-06 55.5 41 53.7
AagrBONN_evm.TU.Sc2ySwM_228.3528 Anthoceros agrestis HOM05D000137 ORTHO05D000382 7.2e-06 55.1 62 40.3
Cpa.g.sc139.47 Carica papaya HOM05D000137 ORTHO05D000382 7.2e-06 55.1 41 46.3
AUR62037169 Chenopodium quinoa HOM05D000137 ORTHO05D000382 7.2e-06 55.1 50 46.0
Dinv38907 Davidia involucrata HOM05D000137 ORTHO05D000382 7.2e-06 55.1 42 57.1
Rhsim01G0222800 Rhododendron simsii HOM05D000137 ORTHO05D000382 7.2e-06 55.1 57 47.4
GSVIVG01026984001 Vitis vinifera HOM05D000137 ORTHO05D000382 7.2e-06 55.1 55 47.3
EL10Ac1g00373 Beta vulgaris HOM05D000137 ORTHO05D000382 9.4e-06 54.7 43 48.8
CSS0036903 Camellia sinensis var. sinensis HOM05D000137 ORTHO05D000382 9.4e-06 54.7 42 54.8
CiPaw.11G130900 Carya illinoinensis HOM05D000137 ORTHO05D000382 9.4e-06 54.7 39 56.4
Ca_19221_v3 Cicer arietinum L. HOM05D000137 ORTHO05D000382 9.4e-06 54.7 41 53.7
Duzib150G0273 Durio zibethinus HOM05D000137 ORTHO05D000382 9.4e-06 54.7 41 51.2
Duzib170G0844 Durio zibethinus HOM05D000137 ORTHO05D000382 9.4e-06 54.7 41 51.2
Duzib205G1591 Durio zibethinus HOM05D000137 ORTHO05D000382 9.4e-06 54.7 43 53.5
Glyma.12G073700 Glycine max HOM05D000137 ORTHO05D000382 9.4e-06 54.7 54 44.4
Glyma.18G236800 Glycine max HOM05D000137 ORTHO05D000382 9.4e-06 54.7 43 51.2
MD06G1089500 Malus domestica HOM05D000137 ORTHO05D000382 9.4e-06 54.7 39 56.4
Prupe.6G090400 Prunus persica HOM05D000137 ORTHO05D000382 9.4e-06 54.7 50 46.0
PGR119G0891 Punica granatum HOM05D000137 ORTHO05D000382 9.4e-06 54.7 57 45.6
Sp6g06110 Schrenkiella parvula HOM05D000137 ORTHO05D000382 9.4e-06 54.7 59 44.1


User provided reference genes

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