Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_018786 Daucus carota HOM05D007861 ORTHO05D007271 2.1e-42 175.3 86 100.0
Haze_23757 Corylus avellana HOM05D007861 ORTHO05D007271 2.4e-14 82.0 81 54.3
Cfa010349 Carpinus fangiana HOM05D007861 ORTHO05D007271 3.1e-14 81.6 81 54.3
CiPaw.14G086500 Carya illinoinensis HOM05D007861 ORTHO05D007271 5.4e-14 80.9 83 53.0
Prupe.6G107700 Prunus persica HOM05D007861 ORTHO05D007271 9.1e-14 80.1 83 49.4
Sed0017526 Sechium edule HOM05D007861 ORTHO05D007271 4.5e-13 77.8 86 51.2
MSTRG.21100 Avicennia marina HOM05D007861 ORTHO05D007271 5.9e-13 77.4 74 55.4
CiPaw.13G118000 Carya illinoinensis HOM05D007861 ORTHO05D007271 7.7e-13 77.0 80 50.0
RcHm_v2.0_Chr5g0057831 Rosa chinensis HOM05D007861 ORTHO05D007271 5.0e-12 74.3 82 47.6
Medtr4g057830 Medicago truncatula HOM05D007861 ORTHO05D007271 6.6e-12 73.9 79 48.1
Glyma.11G195000 Glycine max HOM05D007861 ORTHO05D007271 8.6e-12 73.6 83 49.4
Nn2g13767 Nelumbo nucifera HOM05D007861 ORTHO05D007271 8.6e-12 73.6 79 48.1
FAN16G3504 Fragaria x ananassa HOM05D007861 ORTHO05D007271 1.5e-11 72.8 82 47.6
FvH4_3g31180 Fragaria vesca HOM05D007861 ORTHO05D007271 1.9e-11 72.4 82 46.3
FAN11G3777 Fragaria x ananassa HOM05D007861 ORTHO05D007271 1.9e-11 72.4 82 46.3
FAN25G1997 Fragaria x ananassa HOM05D007861 ORTHO05D007271 1.9e-11 72.4 82 46.3
Phvul.011G083700 Phaseolus vulgaris HOM05D007861 ORTHO05D007271 1.9e-11 72.4 83 49.4
TPR.G6167 Trifolium pratense HOM05D007861 ORTHO05D007271 2.5e-11 72.0 85 44.7
ClCG02G021400 Citrullus lanatus HOM05D007861 ORTHO05D007271 4.2e-11 71.2 72 52.8
Lalb_Chr14g0374511 Lupinus albus HOM05D007861 ORTHO05D007271 4.2e-11 71.2 82 45.1
FAN21G2212 Fragaria x ananassa HOM05D007861 ORTHO05D007271 5.5e-11 70.9 65 53.8
Glyma.12G079100 Glycine max HOM05D007861 ORTHO05D007271 5.5e-11 70.9 83 47.0
arahy.Tifrunner.gnm1.ann1.ALS1H8 Arachis hypogaea HOM05D007861 ORTHO05D007271 9.5e-11 70.1 86 44.2
CsaV3_6G014180 Cucumis sativus L. HOM05D007861 ORTHO05D007271 9.5e-11 70.1 72 52.8
Lalb_Chr24g0394821 Lupinus albus HOM05D007861 ORTHO05D007271 9.5e-11 70.1 82 43.9
Lj3g0027314 Lotus japonicus HOM05D007861 ORTHO05D007271 1.6e-10 69.3 82 46.3
Ciclev10029681m.g Citrus clementina HOM05D007861 ORTHO05D007271 2.8e-10 68.6 71 53.5
Hma1.2p1_0569F.1_g180260 Hydrangea macrophylla HOM05D007861 ORTHO05D007271 3.6e-10 68.2 65 52.3
VMungo1127G1395 Vigna mungo HOM05D007861 ORTHO05D007271 3.6e-10 68.2 83 48.2
COL.COLO4_34705 Corchorus olitorius HOM05D007861 ORTHO05D007271 1.4e-09 66.2 87 48.3
Sed0005749 Sechium edule HOM05D007861 ORTHO05D007271 1.4e-09 66.2 78 48.7
MELO3C026916.2 Cucumis melo HOM05D007861 ORTHO05D007271 1.8e-09 65.9 74 47.3
Glyma.12G177000 Glycine max HOM05D007861 ORTHO05D007271 1.8e-09 65.9 82 41.5
Sabra04G0145100 Salix brachista HOM05D007861 ORTHO05D007271 1.8e-09 65.9 68 55.9
PGSC0003DMG400019683 Solanum tuberosum HOM05D007861 ORTHO05D007271 1.8e-09 65.9 58 51.7
Lj3g0021425 Lotus japonicus HOM05D007861 ORTHO05D007271 2.3e-09 65.5 84 44.0
Manes.11G150200 Manihot esculenta HOM05D007861 ORTHO05D007271 2.3e-09 65.5 69 52.2
Eucgr.J00896 Eucalyptus grandis HOM05D007861 ORTHO05D007271 3.0e-09 65.1 73 49.3
Glyma.13G323700 Glycine max HOM05D007861 ORTHO05D007271 3.0e-09 65.1 82 41.5
Nn2g11569 Nelumbo nucifera HOM05D007861 ORTHO05D007271 3.0e-09 65.1 82 45.1
Lalb_Chr03g0027611 Lupinus albus HOM05D007861 ORTHO05D007271 4.0e-09 64.7 75 45.3
Solyc11g069730.1 Solanum lycopersicum HOM05D007861 ORTHO05D007271 8.9e-09 63.5 76 42.1
Atru.chr3.3557 Acer truncatum HOM05D007861 ORTHO05D007271 1.2e-08 63.2 80 46.2
TAR633G0087 Trochodendron aralioides HOM05D007861 ORTHO05D007271 1.2e-08 63.2 75 45.3
Hma1.2p1_0344F.1_g131140 Hydrangea macrophylla HOM05D007861 ORTHO05D007271 2.0e-08 62.4 86 44.2
Medtr2g095310 Medicago truncatula HOM05D007861 ORTHO05D007271 3.4e-08 61.6 83 42.2
Phvul.005G132100 Phaseolus vulgaris HOM05D007861 ORTHO05D007271 3.4e-08 61.6 83 39.8
Potri.009G008300 Populus trichocarpa HOM05D007861 ORTHO05D007271 4.4e-08 61.2 67 52.2
Migut.D02257 Erythranthe guttata HOM05D007861 ORTHO05D007271 5.7e-08 60.8 72 45.8
Migut.F01962 Erythranthe guttata HOM05D007861 ORTHO05D007271 5.7e-08 60.8 78 42.3
Thecc.09G347700 Theobroma cacao HOM05D007861 ORTHO05D007271 5.7e-08 60.8 83 42.2
Lalb_Chr01g0004491 Lupinus albus HOM05D007861 ORTHO05D007271 7.5e-08 60.5 82 42.7
TPR.G11489 Trifolium pratense HOM05D007861 ORTHO05D007271 7.5e-08 60.5 76 44.7
Gohir.A05G106400 Gossypium hirsutum HOM05D007861 ORTHO05D007271 9.8e-08 60.1 68 50.0
Potri.010G226200 Populus trichocarpa HOM05D007861 ORTHO05D007271 1.3e-07 59.7 71 39.4
Lsat_1_v5_gn_6_43600 Lactuca sativa HOM05D007861 ORTHO05D007271 1.7e-07 59.3 47 55.3
Rhsim03G0116500 Rhododendron simsii HOM05D009695 ORTHO05D007271 2.2e-07 58.9 74 43.2
Potri.004G213900 Populus trichocarpa HOM05D007861 ORTHO05D007271 2.8e-07 58.5 60 51.7
Gohir.D05G106401 Gossypium hirsutum HOM05D007861 ORTHO05D007271 4.9e-07 57.8 68 48.5
Gorai.009G110500 Gossypium raimondii HOM05D007861 ORTHO05D007271 4.9e-07 57.8 68 48.5
Sabra09G0004800 Salix brachista HOM05D007861 ORTHO05D007271 6.3e-07 57.4 59 50.8
Sopen06g031390 Solanum pennellii HOM05D039995 ORTHO05D007271 8.3e-07 57.0 64 45.3
Cc02_g11000 Coffea canephora HOM05D009695 ORTHO05D007271 3.1e-06 55.1 81 38.3
ECA233G4124 Erigeron canadensis HOM05D007861 ORTHO05D007271 3.1e-06 55.1 70 40.0
Cpa.g.sc65.32 Carica papaya HOM05D007861 ORTHO05D007271 7.0e-06 53.9 66 53.0
Gohir.A05G294400 Gossypium hirsutum HOM05D009695 ORTHO05D007271 7.0e-06 53.9 65 44.6
Manes.10G049800 Manihot esculenta HOM05D009695 ORTHO05D007271 9.2e-06 53.5 73 41.1
Potri.008G036000 Populus trichocarpa HOM05D007861 ORTHO05D007271 9.2e-06 53.5 63 41.3


User provided reference genes

Program Settings