Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_018785 Daucus carota HOM05D007330 ORTHO05D009368 8.7e-61 236.9 128 100.0
Dinv34698 Davidia involucrata HOM05D007330 ORTHO05D009368 5.1e-45 184.5 128 76.6
TAR636G1893 Trochodendron aralioides HOM05D007330 ORTHO05D009368 2.5e-44 182.2 125 73.6
Atru.chr3.3558 Acer truncatum HOM05D007330 ORTHO05D009368 1.6e-43 179.5 125 72.8
vmacro03274 Vaccinium macrocarpon HOM05D007330 ORTHO05D009368 2.8e-43 178.7 128 71.9
Thecc.09G347600 Theobroma cacao HOM05D007330 ORTHO05D009368 3.7e-43 178.3 118 73.7
Rhsim13G0098500 Rhododendron simsii HOM05D007330 ORTHO05D009368 8.2e-43 177.2 128 71.9
Manes.11G150100 Manihot esculenta HOM05D007330 ORTHO05D009368 1.1e-42 176.8 116 77.6
CiPaw.13G117900 Carya illinoinensis HOM05D007330 ORTHO05D009368 1.2e-41 173.3 127 69.3
Gohir.D05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 1.2e-41 173.3 112 77.7
Potri.009G008400 Populus trichocarpa HOM05D007330 ORTHO05D009368 1.2e-41 173.3 128 68.8
CSS0040476 Camellia sinensis var. sinensis HOM05D007330 ORTHO05D009368 1.5e-41 172.9 115 75.7
Gohir.A05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 2.0e-41 172.6 112 76.8
Ciclev10029423m.g Citrus clementina HOM05D007330 ORTHO05D009368 2.6e-41 172.2 113 76.1
Hma1.2p1_0569F.1_g180250 Hydrangea macrophylla HOM05D007330 ORTHO05D009368 4.5e-41 171.4 113 79.6
CANSAT35G1795 Cannabis sativa HOM05D007330 ORTHO05D009368 7.7e-41 170.6 129 69.8
HanXRQChr11g0346411 Helianthus annuus HOM05D007330 ORTHO05D009368 7.7e-41 170.6 111 81.1
PGR119G1592 Punica granatum HOM05D007330 ORTHO05D009368 7.7e-41 170.6 113 78.8
TWI31G1101 Tripterygium wilfordii HOM05D007330 ORTHO05D009368 7.7e-41 170.6 119 74.8
Nitab4.5_0000567g0040 Nicotiana tabacum HOM05D007330 ORTHO05D009368 1.0e-40 170.2 113 77.0
Glyma.11G195100 Glycine max HOM05D007330 ORTHO05D009368 1.3e-40 169.9 118 72.9
Glyma.12G079000 Glycine max HOM05D007330 ORTHO05D009368 2.2e-40 169.1 118 72.9
QL01p015978 Quercus lobata HOM05D007330 ORTHO05D009368 5.0e-40 167.9 116 74.1
Eucgr.J00897 Eucalyptus grandis HOM05D007330 ORTHO05D009368 6.5e-40 167.5 113 76.1
FvH4_3g31190 Fragaria vesca HOM05D007330 ORTHO05D009368 6.5e-40 167.5 113 74.3
FAN11G3216 Fragaria x ananassa HOM05D007330 ORTHO05D009368 6.5e-40 167.5 113 74.3
ECA248G2053 Erigeron canadensis HOM05D007330 ORTHO05D009368 1.1e-39 166.8 115 76.5
Solyc04g007410.4 Solanum lycopersicum HOM05D007330 ORTHO05D009368 1.1e-39 166.8 113 73.5
Sopen04g002470 Solanum pennellii HOM05D007330 ORTHO05D009368 1.1e-39 166.8 113 73.5
THA.LOC104814822 Tarenaya hassleriana HOM05D007330 ORTHO05D009368 1.9e-39 166.0 126 68.3
Lsat_1_v5_gn_1_63180 Lactuca sativa HOM05D007330 ORTHO05D009368 3.2e-39 165.2 118 73.7
MSTRG.18683 Avicennia marina HOM05D007330 ORTHO05D009368 4.2e-39 164.9 115 73.9
MELO3C004968.2 Cucumis melo HOM05D007330 ORTHO05D009368 4.2e-39 164.9 121 71.1
CsaV3_1G013380 Cucumis sativus L. HOM05D007330 ORTHO05D009368 4.2e-39 164.9 121 71.1
FAN25G0306 Fragaria x ananassa HOM05D007330 ORTHO05D009368 4.2e-39 164.9 113 72.6
Lj3g0015691 Lotus japonicus HOM05D007330 ORTHO05D009368 5.5e-39 164.5 113 73.5
GSVIVG01031517001 Vitis vinifera HOM05D000070 ORTHO05D001255 5.5e-39 164.5 113 77.0
FAN21G2017 Fragaria x ananassa HOM05D007330 ORTHO05D009368 7.2e-39 164.1 113 72.6
COL.COLO4_34706 Corchorus olitorius HOM05D007330 ORTHO05D009368 9.4e-39 163.7 115 72.2
ClCG03G002650 Citrullus lanatus HOM05D007330 ORTHO05D009368 1.6e-38 162.9 121 70.2
RcHm_v2.0_Chr5g0057841 Rosa chinensis HOM05D007330 ORTHO05D009368 2.1e-38 162.5 113 72.6
Cc01_g10610 Coffea canephora HOM05D007330 ORTHO05D009368 3.6e-38 161.8 116 71.6
Lalb_Chr19g0137021 Lupinus albus HOM05D007330 ORTHO05D009368 3.6e-38 161.8 129 66.7
Sp5g16210 Schrenkiella parvula HOM05D007330 ORTHO05D009368 7.9e-38 160.6 111 75.7
CAN.G1577.6 Capsicum annuum HOM05D007330 ORTHO05D009368 1.0e-37 160.2 113 71.7
Migut.N02576 Erythranthe guttata HOM05D007330 ORTHO05D009368 1.0e-37 160.2 115 69.6
Thhalv10002688m.g Eutrema salsugineum HOM05D007330 ORTHO05D009368 1.0e-37 160.2 113 75.2
BcaB05g23421 Brassica carinata HOM05D007330 ORTHO05D009368 1.4e-37 159.8 113 74.3
BcaC09g49699 Brassica carinata HOM05D007330 ORTHO05D009368 2.3e-37 159.1 113 74.3
A01p26570 Brassica napus HOM05D007330 ORTHO05D009368 2.3e-37 159.1 113 74.3
C01p33810 Brassica napus HOM05D007330 ORTHO05D009368 2.3e-37 159.1 113 74.3
BolC1t03342H Brassica oleracea HOM05D007330 ORTHO05D009368 2.3e-37 159.1 113 74.3
BraA01t02587Z Brassica rapa HOM05D007330 ORTHO05D009368 2.3e-37 159.1 113 74.3
Ah.01g003130 Amaranthus hybridus HOM05D007330 ORTHO05D009368 5.1e-37 157.9 121 68.6
SGA_v2.0_scaffold116G32214 Striga asiatica HOM05D007330 ORTHO05D009368 5.1e-37 157.9 102 76.5
CARHR150920 Cardamine hirsuta HOM05D007330 ORTHO05D009368 1.1e-36 156.8 115 70.4
Ca_19301_v3 Cicer arietinum L. HOM05D007330 ORTHO05D009368 1.1e-36 156.8 113 72.6
Nn2g13766 Nelumbo nucifera HOM05D007330 ORTHO05D009368 1.5e-36 156.4 125 64.0
Sed0025524 Sechium edule HOM05D007330 ORTHO05D009368 4.3e-36 154.8 113 69.9
MD11G1142300 Malus domestica HOM05D007330 ORTHO05D009368 5.7e-36 154.5 115 71.3
Peaxi162Scf00064g00193 Petunia axillaris HOM05D007330 ORTHO05D009368 7.4e-36 154.1 114 73.7
Aa31LG4G14100 Aethionema arabicum HOM05D007330 ORTHO05D009368 1.3e-35 153.3 110 72.7
VMungo1127G0312 Vigna mungo HOM05D007330 ORTHO05D009368 1.3e-35 153.3 118 66.1
AT3G45050 Arabidopsis thaliana HOM05D007330 ORTHO05D009368 4.8e-35 151.4 115 70.4
Carub.0005s1083 Capsella rubella HOM05D007330 ORTHO05D009368 8.2e-35 150.6 115 68.7
Actinidia07167 Actinidia chinensis HOM05D007330 ORTHO05D009368 1.8e-34 149.4 116 65.5
arahy.Tifrunner.gnm1.ann1.PP0PHB Arachis hypogaea HOM05D007330 ORTHO05D009368 4.1e-34 148.3 125 64.8
arahy.Tifrunner.gnm1.ann1.V5GM9G Arachis hypogaea HOM05D007330 ORTHO05D009368 4.1e-34 148.3 125 64.8
Psat4g155560 Pisum sativum HOM05D007330 ORTHO05D009368 4.1e-34 148.3 115 68.7
Medtr4g057845 Medicago truncatula HOM05D007330 ORTHO05D009368 5.3e-34 147.9 113 68.1
PSO339G1528 Papaver somniferum HOM05D007330 ORTHO05D009368 2.6e-33 145.6 127 61.4
Phvul.011G083600 Phaseolus vulgaris HOM05D007330 ORTHO05D009368 8.5e-32 140.6 94 72.3
AUR62022766 Chenopodium quinoa HOM05D007330 ORTHO05D009368 1.9e-31 139.4 113 65.5
Sc15g0001620 Simmondsia chinensis HOM05D007330 ORTHO05D009368 2.5e-31 139.0 113 61.1
Lj1A195G28 Lonicera japonica HOM05D007330 ORTHO05D009368 4.2e-31 138.3 124 64.5
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 7.2e-31 137.5 116 58.6
MBI18_g25263_MAGBIO Magnolia biondii HOM05D007330 ORTHO05D009368 9.4e-31 137.1 141 53.9
Peaxi162Scf00597g00033 Petunia axillaris HOM05D007330 ORTHO05D009368 1.8e-29 132.9 103 71.8
Lj1C194T4 Lonicera japonica HOM05D007330 ORTHO05D009368 3.3e-28 128.6 99 70.7
AL5G23540 Arabidopsis lyrata HOM05D007330 ORTHO05D009368 4.4e-28 128.3 113 62.8
Gorai.009G110400 Gossypium raimondii HOM05D007330 ORTHO05D009368 2.4e-26 122.5 87 72.4
Nitab4.5_0003325g0010 Nicotiana tabacum HOM05D007330 ORTHO05D009368 7.0e-26 120.9 87 74.7
PGSC0003DMG400005973 Solanum tuberosum HOM05D007330 ORTHO05D009368 1.5e-25 119.8 87 71.3
Prupe.6G107600 Prunus persica HOM05D007330 ORTHO05D009368 2.0e-25 119.4 91 69.2
PSO801G0259 Papaver somniferum HOM05D007330 ORTHO05D009368 5.9e-25 117.9 100 60.0
Peaxi162Scf00958g00023 Petunia axillaris HOM05D007330 ORTHO05D009368 1.7e-24 116.3 92 73.9
Cpa.g.sc65.31 Carica papaya HOM05D007330 ORTHO05D009368 2.2e-24 115.9 86 72.1
Aqoxy2G01788 Aquilegia oxysepala HOM05D007330 ORTHO05D009368 3.2e-23 112.1 95 65.3
Sabra09G0004900 Salix brachista HOM05D007330 ORTHO05D009368 5.5e-23 111.3 100 58.0
HPP92_007165 Vanilla planifolia HOM05D007330 ORTHO05D009368 3.6e-22 108.6 110 54.5
SEGI_17989 Sequoiadendron giganteum HOM05D007330 ORTHO05D009368 3.0e-21 105.5 122 46.7
Pp3c18_13360 Physcomitrium patens HOM05D007330 ORTHO05D009368 8.8e-21 104.0 122 45.9
Hund08155 Selenicereus undatus HOM05D007330 ORTHO05D009368 3.7e-19 98.6 84 63.1
AagrBONN_evm.TU.Sc2ySwM_228.4164 Anthoceros agrestis HOM05D007330 ORTHO05D009368 3.1e-18 95.5 114 45.6
Os06g0731300 Oryza sativa ssp. japonica HOM05D007330 ORTHO05D009368 2.0e-17 92.8 71 56.3
CBR_g54316 Chara braunii HOM05D007330 ORTHO05D009368 3.5e-17 92.0 115 43.5
MD03G1125100 Malus domestica HOM05D007330 ORTHO05D009368 4.5e-17 91.7 55 76.4
Mapoly0184s0021 Marchantia polymorpha HOM05D007330 ORTHO05D009368 3.8e-16 88.6 117 43.6
Haze_23760 Corylus avellana HOM05D007330 ORTHO05D009368 1.5e-15 86.7 153 39.9
AUR62029217 Chenopodium quinoa HOM05D007330 ORTHO05D009368 1.0e-13 80.5 104 51.0
SMO275G0064 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 2.6e-12 75.9 112 43.8
SMO367G0878 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 4.4e-12 75.1 112 43.8
Oeu013536.1 Olea europaea HOM05D000070 ORTHO05D001255 1.7e-11 73.2 108 44.4
EL10Ac9g22568 Beta vulgaris HOM05D007330 ORTHO05D009368 1.7e-08 63.2 113 40.7
arahy.Tifrunner.gnm1.ann1.N36MJA Arachis hypogaea HOM05D007330 ORTHO05D009368 2.9e-08 62.4 78 47.4
Actinidia24129 Actinidia chinensis HOM05D000070 ORTHO05D001255 8.5e-08 60.8 55 67.3


User provided reference genes

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