Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_018778 Daucus carota HOM05D007495 ORTHO05D009552 2.1e-89 332.4 175 100.0
CSS0017583 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 2.0e-55 219.5 172 67.4
Hma1.2p1_0051F.1_g029310 Hydrangea macrophylla HOM05D007495 ORTHO05D009552 9.8e-55 217.2 176 65.3
Rhsim13G0099600 Rhododendron simsii HOM05D007495 ORTHO05D009552 9.8e-55 217.2 162 72.8
Dinv34730 Davidia involucrata HOM05D007495 ORTHO05D009552 1.6e-52 209.9 173 68.2
Actinidia24137 Actinidia chinensis HOM05D007495 ORTHO05D009552 4.5e-52 208.4 159 74.2
Lj2C1012G12 Lonicera japonica HOM05D007495 ORTHO05D009552 7.7e-52 207.6 170 63.5
GSVIVG01031491001 Vitis vinifera HOM05D007495 ORTHO05D009552 1.7e-51 206.5 169 63.3
TAR633G0300 Trochodendron aralioides HOM05D007495 ORTHO05D009552 5.0e-51 204.9 171 60.8
MSTRG.17767 Avicennia marina HOM05D007495 ORTHO05D009552 1.9e-50 203.0 171 60.2
Oeu018477.1 Olea europaea HOM05D007495 ORTHO05D009552 1.9e-50 203.0 171 63.2
Cc01_g10460 Coffea canephora HOM05D007495 ORTHO05D009552 5.5e-50 201.4 171 62.6
Nitab4.5_0005092g0010 Nicotiana tabacum HOM05D007495 ORTHO05D009552 6.1e-49 198.0 173 59.0
Peaxi162Scf00892g00019 Petunia axillaris HOM05D007495 ORTHO05D009552 6.1e-49 198.0 158 66.5
Nitab4.5_0000329g0280 Nicotiana tabacum HOM05D007495 ORTHO05D009552 1.4e-48 196.8 166 60.8
SGA_v2.0_scaffold436G51603 Striga asiatica HOM05D007495 ORTHO05D009552 2.3e-48 196.1 171 59.1
Migut.N02567 Erythranthe guttata HOM05D007495 ORTHO05D009552 6.8e-48 194.5 172 59.3
Sopen11g025970 Solanum pennellii HOM05D007495 ORTHO05D009552 8.8e-48 194.1 161 65.2
Nn6g35262 Nelumbo nucifera HOM05D007495 ORTHO05D009552 2.6e-47 192.6 171 57.3
QL01p015526 Quercus lobata HOM05D007495 ORTHO05D009552 2.6e-47 192.6 174 56.9
Solyc11g066240.3 Solanum lycopersicum HOM05D007495 ORTHO05D009552 5.7e-47 191.4 162 65.4
SalBow3G3637 Salvia bowleyana HOM05D007495 ORTHO05D009552 7.5e-47 191.0 168 57.1
PGSC0003DMG400010906 Solanum tuberosum HOM05D007495 ORTHO05D009552 7.5e-47 191.0 161 65.2
PGSC0003DMG400000407 Solanum tuberosum HOM05D007495 ORTHO05D009552 9.8e-47 190.7 161 60.9
Lsat_1_v5_gn_2_96660 Lactuca sativa HOM05D007495 ORTHO05D009552 1.3e-46 190.3 178 57.3
SalBow1G5708 Salvia bowleyana HOM05D007495 ORTHO05D009552 2.8e-46 189.1 167 57.5
HanXRQChr09g0259381 Helianthus annuus HOM05D007495 ORTHO05D009552 4.9e-46 188.3 175 59.4
Atru.chr3.3537 Acer truncatum HOM05D007495 ORTHO05D009552 1.4e-45 186.8 173 54.3
Prupe.6G109500 Prunus persica HOM05D007495 ORTHO05D009552 1.4e-45 186.8 176 55.7
vmacro03264 Vaccinium macrocarpon HOM05D007495 ORTHO05D009552 1.8e-45 186.4 202 52.5
Sopen01g017570 Solanum pennellii HOM05D007495 ORTHO05D009552 3.1e-45 185.7 161 57.8
CiPaw.13G124600 Carya illinoinensis HOM05D007495 ORTHO05D009552 3.5e-44 182.2 173 54.3
ClCG02G021490 Citrullus lanatus HOM05D007495 ORTHO05D009552 3.5e-44 182.2 171 52.6
Haze_23728 Corylus avellana HOM05D007495 ORTHO05D009552 7.7e-44 181.0 174 54.6
CsaV3_6G014270 Cucumis sativus L. HOM05D007495 ORTHO05D009552 7.7e-44 181.0 171 54.4
Manes.04G014200 Manihot esculenta HOM05D007495 ORTHO05D009552 2.9e-43 179.1 173 55.5
MELO3C026944.2 Cucumis melo HOM05D007495 ORTHO05D009552 5.0e-43 178.3 171 52.0
FAN25G1473 Fragaria x ananassa HOM05D007495 ORTHO05D009552 5.0e-43 178.3 171 53.8
Cfa010302 Carpinus fangiana HOM05D007495 ORTHO05D009552 6.6e-43 177.9 174 54.6
RcHm_v2.0_Chr5g0057451 Rosa chinensis HOM05D007495 ORTHO05D009552 1.5e-42 176.8 171 52.0
Potri.004G215300 Populus trichocarpa HOM05D007495 ORTHO05D009552 1.9e-42 176.4 163 56.4
FAN21G3793 Fragaria x ananassa HOM05D007495 ORTHO05D009552 7.2e-42 174.5 171 52.0
Sabra04G0146300 Salix brachista HOM05D007495 ORTHO05D009552 7.2e-42 174.5 163 55.2
Ciclev10029419m.g Citrus clementina HOM05D007495 ORTHO05D009552 2.8e-41 172.6 176 50.0
Ah.01g003160 Amaranthus hybridus HOM05D007495 ORTHO05D009552 1.4e-40 170.2 167 56.9
MD11G1146400 Malus domestica HOM05D007495 ORTHO05D009552 1.4e-40 170.2 172 52.9
Hund08367 Selenicereus undatus HOM05D007495 ORTHO05D009552 2.0e-39 166.4 171 51.5
BcaB01g03091 Brassica carinata HOM05D007495 ORTHO05D009552 2.6e-39 166.0 167 51.5
Aqoxy1G01135 Aquilegia oxysepala HOM05D007495 ORTHO05D009552 3.4e-39 165.6 159 52.8
AUR62014942 Chenopodium quinoa HOM05D007495 ORTHO05D009552 9.8e-39 164.1 166 54.8
AUR62029199 Chenopodium quinoa HOM05D007495 ORTHO05D009552 9.8e-39 164.1 165 55.2
Thhalv10017338m.g Eutrema salsugineum HOM05D007495 ORTHO05D009552 9.8e-39 164.1 167 50.3
Glyma.13G322700 Glycine max HOM05D007495 ORTHO05D009552 9.8e-39 164.1 167 51.5
Eucgr.B03939 Eucalyptus grandis HOM05D007495 ORTHO05D009552 1.7e-38 163.3 163 51.5
Sed0010722 Sechium edule HOM05D007495 ORTHO05D009552 2.2e-38 162.9 159 52.8
Sp4g10910 Schrenkiella parvula HOM05D007495 ORTHO05D009552 2.9e-38 162.5 161 55.3
arahy.Tifrunner.gnm1.ann1.F5YJ3L Arachis hypogaea HOM05D007495 ORTHO05D009552 3.7e-38 162.2 165 50.9
arahy.Tifrunner.gnm1.ann1.KUS9HA Arachis hypogaea HOM05D007495 ORTHO05D009552 3.7e-38 162.2 168 51.8
A03p26400 Brassica napus HOM05D007495 ORTHO05D009552 4.9e-38 161.8 161 50.9
BraA03t11855Z Brassica rapa HOM05D007495 ORTHO05D009552 4.9e-38 161.8 161 50.9
Phvul.005G131100 Phaseolus vulgaris HOM05D007495 ORTHO05D009552 6.4e-38 161.4 168 50.0
C03p31690 Brassica napus HOM05D007495 ORTHO05D009552 1.4e-37 160.2 161 50.9
Carub.0004s0888 Capsella rubella HOM05D007495 ORTHO05D009552 1.4e-37 160.2 162 49.4
MBI11_g41957_MAGBIO Magnolia biondii HOM05D007495 ORTHO05D009552 1.4e-37 160.2 169 51.5
Lalb_Chr24g0394861 Lupinus albus HOM05D007495 ORTHO05D009552 2.4e-37 159.5 160 49.4
BcaC01g04959 Brassica carinata HOM05D007495 ORTHO05D009552 5.4e-37 158.3 161 50.3
BolC3t15512H Brassica oleracea HOM05D007495 ORTHO05D009552 5.4e-37 158.3 161 50.3
AL4G22050 Arabidopsis lyrata HOM05D007495 ORTHO05D009552 4.6e-36 155.2 162 47.5
THA.LOC104800583 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 4.6e-36 155.2 168 47.6
VMungo1080G0225 Vigna mungo HOM05D007495 ORTHO05D009552 4.6e-36 155.2 158 49.4
AT2G28105 Arabidopsis thaliana HOM05D007495 ORTHO05D009552 1.0e-35 154.1 162 47.5
PGR102G0900 Punica granatum HOM05D007495 ORTHO05D009552 1.0e-35 154.1 160 49.4
EL10Ac9g22596 Beta vulgaris HOM05D007495 ORTHO05D009552 1.7e-35 153.3 199 46.2
PSO210G3489 Papaver somniferum HOM05D007495 ORTHO05D009552 3.9e-35 152.1 171 49.1
CARHR120870 Cardamine hirsuta HOM05D007495 ORTHO05D009552 5.0e-35 151.8 162 48.1
THA.LOC104808393 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 6.6e-35 151.4 164 48.8
Thecc.09G349500 Theobroma cacao HOM05D007495 ORTHO05D009552 5.6e-34 148.3 168 47.6
PSO210G2188 Papaver somniferum HOM05D007495 ORTHO05D009552 8.0e-33 144.4 171 46.8
ATR1132G058 Amborella trichopoda HOM05D007495 ORTHO05D009552 4.0e-32 142.1 168 46.4
HPP92_026750 Vanilla planifolia HOM05D007495 ORTHO05D009552 8.9e-32 141.0 162 46.9
FvH4_3g30910 Fragaria vesca HOM05D007495 ORTHO05D009552 2.6e-31 139.4 142 51.4
CSS0034387 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 9.8e-31 137.5 117 63.2
Aa31LG5G8040 Aethionema arabicum HOM05D002446 ORTHO05D002941 2.9e-30 136.0 147 48.3
unitig_27.g25050 Utricularia gibba HOM05D007495 ORTHO05D009552 1.1e-29 134.0 100 63.0
CAN.G546.21 Capsicum annuum HOM05D007495 ORTHO05D009552 1.4e-29 133.7 96 66.7
Duzib168G1093 Durio zibethinus HOM05D007495 ORTHO05D009552 4.6e-28 128.6 170 43.5
Gorai.007G006500 Gossypium raimondii HOM05D007495 ORTHO05D009552 7.8e-28 127.9 169 42.6
Pp3c2_14140 Physcomitrium patens HOM05D007495 ORTHO05D009552 7.8e-28 127.9 160 41.9
Duzib147G1262 Durio zibethinus HOM05D007495 ORTHO05D009552 1.3e-27 127.1 161 43.5
Gohir.D11G005300 Gossypium hirsutum HOM05D007495 ORTHO05D009552 8.6e-27 124.4 169 40.8
Gohir.A11G006200 Gossypium hirsutum HOM05D007495 ORTHO05D009552 4.3e-26 122.1 169 40.8
CDE08G1192 Ceratophyllum demersum HOM05D007495 ORTHO05D009552 7.3e-26 121.3 152 40.8
Solyc01g034070.2 Solanum lycopersicum HOM05D007495 ORTHO05D009552 1.5e-23 113.6 110 52.7
COL.COLO4_31833 Corchorus olitorius HOM05D000070 ORTHO05D005950 1.5e-18 97.1 113 47.8
arahy.Tifrunner.gnm1.ann1.48A6J1 Arachis hypogaea HOM05D007495 ORTHO05D009552 4.3e-18 95.5 95 52.6
QL01p015485 Quercus lobata HOM05D007495 ORTHO05D000007 4.0e-16 89.0 96 53.1
Thecc.09G349300 Theobroma cacao HOM05D007495 ORTHO05D009552 1.5e-15 87.0 119 40.3
AagrBONN_evm.TU.Sc2ySwM_228.3308 Anthoceros agrestis HOM05D007495 ORTHO05D009552 5.8e-15 85.1 138 34.1
TAR636G3027 Trochodendron aralioides HOM05D007495 ORTHO05D009552 2.2e-14 83.2 79 54.4
SEGI_19183 Sequoiadendron giganteum HOM05D007495 ORTHO05D009552 8.4e-14 81.3 107 39.3
Actinidia07176 Actinidia chinensis HOM05D007495 ORTHO05D009552 1.0e-11 74.3 43 79.1
arahy.Tifrunner.gnm1.ann1.SCS43X Arachis hypogaea HOM05D007495 ORTHO05D009552 2.6e-07 59.7 50 54.0
arahy.Tifrunner.gnm1.ann1.U22N6I Arachis hypogaea HOM05D001167 ORTHO05D014890 3.4e-07 59.3 35 74.3


User provided reference genes

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