Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_018770 Daucus carota HOM05D006101 ORTHO05D007422 8.1e-205 716.8 361 100.0
Dinv16214 Davidia involucrata HOM05D006101 ORTHO05D007422 2.3e-111 406.4 367 58.0
CSS0020443 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 1.2e-110 404.1 367 57.8
TAR636G3121 Trochodendron aralioides HOM05D006101 ORTHO05D007422 1.4e-103 380.6 371 53.6
Lj2C1009G5 Lonicera japonica HOM05D006101 ORTHO05D007422 2.3e-103 379.8 361 54.6
GSVIVG01031479001 Vitis vinifera HOM05D006101 ORTHO05D007422 6.4e-101 371.7 367 54.8
CSS0026133 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 3.2e-100 369.4 325 59.1
Hma1.2p1_0051F.1_g029390 Hydrangea macrophylla HOM05D006101 ORTHO05D007422 4.6e-99 365.5 348 53.2
MSTRG.21091 Avicennia marina HOM05D006101 ORTHO05D007422 3.9e-98 362.5 367 51.5
QL01p015279 Quercus lobata HOM05D006101 ORTHO05D007422 1.5e-97 360.5 369 51.8
MD11G1147300 Malus domestica HOM05D006101 ORTHO05D007422 1.4e-95 354.0 364 52.2
Actinidia03696 Actinidia chinensis HOM05D006101 ORTHO05D007422 3.1e-95 352.8 367 55.6
Migut.D02287 Erythranthe guttata HOM05D006101 ORTHO05D007422 6.8e-95 351.7 371 50.1
Atru.chr3.3528 Acer truncatum HOM05D006101 ORTHO05D007422 1.5e-94 350.5 365 51.8
RcHm_v2.0_Chr5g0056961 Rosa chinensis HOM05D006101 ORTHO05D007422 5.8e-94 348.6 367 49.9
Nn2g13844 Nelumbo nucifera HOM05D006101 ORTHO05D007422 3.8e-93 345.9 370 49.2
CiPaw.13G123600 Carya illinoinensis HOM05D006101 ORTHO05D007422 1.4e-92 344.0 363 50.7
CAN.G546.34 Capsicum annuum HOM05D006101 ORTHO05D007422 3.2e-92 342.8 373 46.9
SGA_v2.0_scaffold27G11561 Striga asiatica HOM05D006101 ORTHO05D007422 3.2e-92 342.8 371 48.8
Cfa010291 Carpinus fangiana HOM05D006101 ORTHO05D007422 4.1e-92 342.4 369 50.1
PGR102G2892 Punica granatum HOM05D006101 ORTHO05D007422 4.1e-92 342.4 368 48.4
Dinv29372 Davidia involucrata HOM05D006101 ORTHO05D007422 5.4e-92 342.0 325 54.5
Lsat_1_v5_gn_6_44300 Lactuca sativa HOM05D006101 ORTHO05D007422 3.5e-91 339.3 359 50.4
Haze_23705 Corylus avellana HOM05D006101 ORTHO05D007422 6.0e-91 338.6 362 51.4
Nitab4.5_0000329g0130 Nicotiana tabacum HOM05D006101 ORTHO05D007422 7.8e-91 338.2 371 47.2
Potri.009G006200 Populus trichocarpa HOM05D006101 ORTHO05D007422 1.7e-90 337.0 364 50.0
Peaxi162Scf00086g01114 Petunia axillaris HOM05D006101 ORTHO05D007422 3.0e-90 336.3 357 48.7
Manes.04G013700 Manihot esculenta HOM05D006101 ORTHO05D007422 3.9e-90 335.9 370 48.6
Solyc11g066340.2 Solanum lycopersicum HOM05D006101 ORTHO05D007422 7.3e-89 331.6 372 45.7
Prupe.6G111800 Prunus persica HOM05D006101 ORTHO05D007422 9.6e-89 331.3 367 48.5
Cc01_g10370 Coffea canephora HOM05D006101 ORTHO05D007422 2.1e-88 330.1 375 46.1
Phvul.011G085500 Phaseolus vulgaris HOM05D006101 ORTHO05D007422 2.8e-88 329.7 368 48.4
FvH4_3g30770 Fragaria vesca HOM05D006101 ORTHO05D007422 3.6e-88 329.3 367 48.2
FAN21G1086 Fragaria x ananassa HOM05D006101 ORTHO05D007422 8.1e-88 328.2 361 49.0
Eucgr.B03934 Eucalyptus grandis HOM05D006101 ORTHO05D007422 1.1e-87 327.8 368 50.0
SalBow4G3219 Salvia bowleyana HOM05D006101 ORTHO05D007422 2.4e-87 326.6 361 47.4
PGSC0003DMG400000413 Solanum tuberosum HOM05D006101 ORTHO05D007422 2.4e-87 326.6 371 44.7
Sopen11g026080 Solanum pennellii HOM05D006101 ORTHO05D007422 3.1e-87 326.2 372 44.9
AT2G28130 Arabidopsis thaliana HOM05D006101 ORTHO05D007422 1.2e-86 324.3 365 47.1
Oeu007313.2 Olea europaea HOM05D006101 ORTHO05D007422 1.5e-86 323.9 396 44.4
FAN25G1259 Fragaria x ananassa HOM05D006101 ORTHO05D007422 4.4e-86 322.4 367 48.2
HanXRQChr13g0396251 Helianthus annuus HOM05D006101 ORTHO05D007422 7.6e-86 321.6 365 47.7
ClCG03G002470 Citrullus lanatus HOM05D006101 ORTHO05D007422 1.3e-85 320.9 368 46.5
TWI75G1238 Tripterygium wilfordii HOM05D006101 ORTHO05D007422 1.3e-85 320.9 366 48.9
CsaV3_1G013150 Cucumis sativus L. HOM05D006101 ORTHO05D007422 2.2e-85 320.1 368 46.2
FAN11G1700 Fragaria x ananassa HOM05D002446 ORTHO05D007422 6.4e-85 318.5 366 47.5
Glyma.11G193400 Glycine max HOM05D006101 ORTHO05D007422 6.4e-85 318.5 366 47.5
Carub.0004s0893 Capsella rubella HOM05D006101 ORTHO05D007422 8.4e-85 318.2 364 47.0
THA.LOC104800579 Tarenaya hassleriana HOM05D006101 ORTHO05D007422 4.2e-84 315.8 372 46.8
Aa31LG5G8010 Aethionema arabicum HOM05D006101 ORTHO05D007422 5.4e-84 315.5 360 48.9
Lalb_Chr19g0136961 Lupinus albus HOM05D006101 ORTHO05D007422 5.4e-84 315.5 372 46.5
FAN16G0923 Fragaria x ananassa HOM05D006101 ORTHO05D007422 7.1e-84 315.1 362 47.5
CANSAT56G2622 Cannabis sativa HOM05D006101 ORTHO05D007422 9.3e-84 314.7 363 47.1
Aqoxy1G01111 Aquilegia oxysepala HOM05D006101 ORTHO05D007422 1.2e-83 314.3 378 46.0
PSO339G3309 Papaver somniferum HOM05D006101 ORTHO05D007422 2.7e-83 313.2 378 44.4
PSO063G0796 Papaver somniferum HOM05D006101 ORTHO05D007422 4.6e-83 312.4 378 44.2
Sc06g0010850 Simmondsia chinensis HOM05D006101 ORTHO05D007422 1.3e-82 310.8 386 43.5
Medtr4g057493 Medicago truncatula HOM05D006101 ORTHO05D007422 1.7e-82 310.5 370 44.9
VMungo1127G1509 Vigna mungo HOM05D006101 ORTHO05D007422 2.3e-82 310.1 371 46.4
Duzib150G0708 Durio zibethinus HOM05D006101 ORTHO05D007422 6.6e-82 308.5 367 46.9
Ca_30122_v3 Cicer arietinum L. HOM05D006101 ORTHO05D007422 8.7e-82 308.1 369 45.3
Rhsim01G0211100 Rhododendron simsii HOM05D006101 ORTHO05D007422 8.7e-82 308.1 363 50.1
Sed0008610 Sechium edule HOM05D006101 ORTHO05D007422 8.7e-82 308.1 368 45.4
Gohir.D03G139000 Gossypium hirsutum HOM05D006101 ORTHO05D007422 2.5e-81 306.6 370 45.1
Lj3g0002990 Lotus japonicus HOM05D006101 ORTHO05D007422 3.3e-81 306.2 374 44.7
BcaC02g10947 Brassica carinata HOM05D006101 ORTHO05D007422 7.3e-81 305.1 366 45.6
Gohir.A03G029500 Gossypium hirsutum HOM05D006101 ORTHO05D007422 7.3e-81 305.1 370 44.9
Thecc.09G350300 Theobroma cacao HOM05D006101 ORTHO05D007422 7.3e-81 305.1 367 46.3
BolC4t23840H Brassica oleracea HOM05D006101 ORTHO05D007422 9.6e-81 304.7 359 46.5
COL.COLO4_11107 Corchorus olitorius HOM05D006101 ORTHO05D007422 1.3e-80 304.3 366 46.4
EL10Ac9g22610 Beta vulgaris HOM05D006101 ORTHO05D007422 2.8e-80 303.1 375 45.6
Sp4g10940 Schrenkiella parvula HOM05D006101 ORTHO05D007422 3.6e-80 302.8 364 45.3
Ca_02469_v3 Cicer arietinum L. HOM05D006101 ORTHO05D007422 4.8e-80 302.4 363 45.2
Gorai.003G145800 Gossypium raimondii HOM05D006101 ORTHO05D007422 4.8e-80 302.4 370 44.9
C04p23380 Brassica napus HOM05D006101 ORTHO05D007422 6.2e-80 302.0 361 46.3
Psat0s1387g0080 Pisum sativum HOM05D006101 ORTHO05D007422 8.1e-80 301.6 370 44.1
MELO3C004994.2 Cucumis melo HOM05D006101 ORTHO05D007422 1.1e-79 301.2 389 43.2
BcaB02g10150 Brassica carinata HOM05D006101 ORTHO05D007422 5.8e-78 295.4 366 44.8
AUR62029180 Chenopodium quinoa HOM05D006101 ORTHO05D007422 1.3e-77 294.3 377 44.3
AL4G22020 Arabidopsis lyrata HOM05D006101 ORTHO05D007422 1.7e-77 293.9 367 45.5
ATR0088G017 Amborella trichopoda HOM05D006101 ORTHO05D007422 2.2e-77 293.5 351 43.9
BraA07t29579Z Brassica rapa HOM05D006101 ORTHO05D007422 2.2e-77 293.5 365 43.8
A07p18660 Brassica napus HOM05D006101 ORTHO05D007422 8.4e-77 291.6 378 42.9
CARHR120970 Cardamine hirsuta HOM05D006101 ORTHO05D007422 1.8e-74 283.9 362 43.9
vmacro14396 Vaccinium macrocarpon HOM05D006101 ORTHO05D007422 6.7e-74 282.0 361 45.7
Ciclev10028403m.g Citrus clementina HOM05D006101 ORTHO05D007422 1.5e-73 280.8 369 44.4
MBI13_g39328_MAGBIO Magnolia biondii HOM05D006101 ORTHO05D007422 3.3e-73 279.6 402 40.5
Thhalv10016576m.g Eutrema salsugineum HOM05D006101 ORTHO05D007422 4.3e-73 279.3 394 42.9
Sabra09G0003500 Salix brachista HOM05D006101 ORTHO05D007422 8.1e-72 275.0 291 50.2
CDE09G0605 Ceratophyllum demersum HOM05D006101 ORTHO05D007422 3.4e-70 269.6 362 40.1
ECA233G2185 Erigeron canadensis HOM05D006101 ORTHO05D007422 1.7e-69 267.3 367 42.8
Glyma.12G080600 Glycine max HOM05D006101 ORTHO05D007422 1.9e-68 263.8 368 42.1
Os01g0241100 Oryza sativa ssp. japonica HOM05D006101 ORTHO05D007422 8.1e-64 248.4 370 42.2
HPP92_020176 Vanilla planifolia HOM05D006101 ORTHO05D007422 3.2e-60 236.5 370 38.4
unitig_747.g21973 Utricularia gibba HOM05D006101 ORTHO05D007422 9.3e-60 235.0 269 43.5
Hund08365 Selenicereus undatus HOM05D006101 ORTHO05D007422 8.2e-56 221.9 374 35.8
Ah.01g014140 Amaranthus hybridus HOM05D006101 ORTHO05D007422 6.9e-55 218.8 393 35.1
HanXRQChr04g0111151 Helianthus annuus HOM05D006101 ORTHO05D007422 4.5e-54 216.1 276 43.8
Nitab4.5_0003880g0040 Nicotiana tabacum HOM05D006101 ORTHO05D007422 2.7e-51 206.8 384 34.1
Zm00001eb118850 Zea mays HOM05D006101 ORTHO05D007422 5.5e-44 182.6 271 39.5
arahy.Tifrunner.gnm1.ann1.P58SHS Arachis hypogaea HOM05D006101 ORTHO05D007422 1.0e-42 178.3 380 32.6
arahy.Tifrunner.gnm1.ann1.V5BWPF Arachis hypogaea HOM05D006101 ORTHO05D007422 1.4e-42 177.9 380 32.4
arahy.Tifrunner.gnm1.ann1.66BK9V Arachis hypogaea HOM05D006101 ORTHO05D007422 3.3e-41 173.3 360 31.9
AUR62014957 Chenopodium quinoa HOM05D006101 ORTHO05D007422 2.2e-40 170.6 273 37.7
SHI06228 Sapria himalayana HOM05D006101 ORTHO05D007422 1.8e-39 167.5 192 44.3
Hma1.2p1_0051F.1_g029400 Hydrangea macrophylla HOM05D006101 ORTHO05D007422 5.5e-36 156.0 139 54.7
Pp3c4_7040 Physcomitrium patens HOM05D006101 ORTHO05D007422 2.2e-29 134.0 353 29.2
Actinidia20431 Actinidia chinensis HOM05D006101 ORTHO05D007422 1.1e-28 131.7 115 58.3
SEGI_30921 Sequoiadendron giganteum HOM05D006101 ORTHO05D007422 4.2e-28 129.8 223 35.9
Mapoly0094s0062 Marchantia polymorpha HOM05D006101 ORTHO05D007422 2.7e-27 127.1 293 29.4
VMungo1215G2511 Vigna mungo HOM05D006101 ORTHO05D007422 8.8e-26 122.1 141 45.4
arahy.Tifrunner.gnm1.ann1.PH2QKZ Arachis hypogaea HOM05D006101 ORTHO05D007422 1.0e-18 98.6 247 30.4
arahy.Tifrunner.gnm1.ann1.EU9JMW Arachis hypogaea HOM05D006101 ORTHO05D007422 2.9e-13 80.5 162 32.7
arahy.Tifrunner.gnm1.ann1.88XJ4T Arachis hypogaea HOM05D006101 ORTHO05D007422 3.2e-12 77.0 119 35.3
SHI06230 Sapria himalayana HOM05D006101 ORTHO05D007422 3.2e-12 77.0 137 40.1
CBR_g12009 Chara braunii HOM05D006101 ORTHO05D007422 7.2e-12 75.9 391 24.3
arahy.Tifrunner.gnm1.ann1.KM9ELV Arachis hypogaea HOM05D006101 ORTHO05D007422 1.7e-08 64.7 194 27.8
unitig_747.g21974 Utricularia gibba HOM05D006101 ORTHO05D007422 3.5e-06 57.0 79 45.6


User provided reference genes

Program Settings