Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_018745 Daucus carota HOM05D006227 ORTHO05D007714 4.9e-44 180.6 85 100.0
DCAR_015484 Daucus carota HOM05D006227 ORTHO05D007714 5.4e-35 150.6 78 88.5
Hma1.2p1_0051F.1_g029840 Hydrangea macrophylla HOM05D006227 ORTHO05D007714 5.6e-32 140.6 78 83.3
Rhsim01G0209000 Rhododendron simsii HOM05D006227 ORTHO05D007714 7.4e-32 140.2 80 81.2
Peaxi162Scf00428g01022 Petunia axillaris HOM05D006227 ORTHO05D007714 1.3e-31 139.4 77 84.4
RcHm_v2.0_Chr5g0055601 Rosa chinensis HOM05D006227 ORTHO05D007714 2.8e-31 138.3 78 79.5
CSS0048767 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 8.1e-31 136.7 78 82.1
CSS0049374 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 1.1e-30 136.3 79 79.7
ECA238G2178 Erigeron canadensis HOM05D006227 ORTHO05D007714 1.8e-30 135.6 75 80.0
Prupe.6G117700 Prunus persica HOM05D006227 ORTHO05D007714 1.8e-30 135.6 78 78.2
MD14G1038500 Malus domestica HOM05D006227 ORTHO05D007714 3.1e-30 134.8 78 78.2
Manes.11G155900 Manihot esculenta HOM05D006227 ORTHO05D007714 3.1e-30 134.8 78 76.9
CsaV3_1G014480 Cucumis sativus L. HOM05D006227 ORTHO05D007714 5.3e-30 134.0 78 75.6
Sed0008116 Sechium edule HOM05D006227 ORTHO05D007714 6.9e-30 133.7 78 75.6
Sopen01g033870 Solanum pennellii HOM05D006227 ORTHO05D007714 9.0e-30 133.3 75 84.0
vmacro14378 Vaccinium macrocarpon HOM05D006227 ORTHO05D007714 1.2e-29 132.9 78 79.5
CAN.G170.132 Capsicum annuum HOM05D006227 ORTHO05D007714 1.5e-29 132.5 75 81.3
HanXRQChr07g0197671 Helianthus annuus HOM05D006227 ORTHO05D007714 2.0e-29 132.1 76 77.6
Nitab4.5_0001542g0090 Nicotiana tabacum HOM05D006227 ORTHO05D007714 2.0e-29 132.1 76 80.3
Solyc01g086860.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 2.0e-29 132.1 75 82.7
Nitab4.5_0006850g0030 Nicotiana tabacum HOM05D006227 ORTHO05D007714 3.4e-29 131.3 77 79.2
PGSC0003DMG400025251 Solanum tuberosum HOM05D006227 ORTHO05D007714 3.4e-29 131.3 77 81.8
AUR62036497 Chenopodium quinoa HOM05D006227 ORTHO05D007714 4.5e-29 131.0 80 71.2
MELO3C004803.2 Cucumis melo HOM05D006227 ORTHO05D007714 4.5e-29 131.0 78 73.1
Oeu050173.1 Olea europaea HOM05D006227 ORTHO05D007714 4.5e-29 131.0 78 76.9
Actinidia07213 Actinidia chinensis HOM05D006227 ORTHO05D007714 5.8e-29 130.6 78 76.9
Ciclev10029628m.g Citrus clementina HOM05D006227 ORTHO05D007714 5.8e-29 130.6 78 76.9
AUR62037073 Chenopodium quinoa HOM05D006227 ORTHO05D007714 7.6e-29 130.2 80 71.2
Solyc01g112370.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 7.6e-29 130.2 75 82.7
Cc01_g09910 Coffea canephora HOM05D006227 ORTHO05D007714 9.9e-29 129.8 78 75.6
Eucgr.J00418 Eucalyptus grandis HOM05D006227 ORTHO05D007714 9.9e-29 129.8 78 75.6
MSTRG.21069 Avicennia marina HOM05D006227 ORTHO05D007714 1.3e-28 129.4 78 74.4
Nitab4.5_0002781g0010 Nicotiana tabacum HOM05D006227 ORTHO05D007714 1.3e-28 129.4 75 80.0
Dinv12530 Davidia involucrata HOM05D006227 ORTHO05D007714 1.7e-28 129.0 78 78.2
Dinv29415 Davidia involucrata HOM05D006227 ORTHO05D007714 2.2e-28 128.6 77 77.9
TWI56G0405 Tripterygium wilfordii HOM05D006227 ORTHO05D007714 2.9e-28 128.3 78 73.1
CANSAT54G1955 Cannabis sativa HOM05D006227 ORTHO05D007714 3.8e-28 127.9 78 71.8
Lj4g0025300 Lotus japonicus HOM05D006227 ORTHO05D007714 4.9e-28 127.5 77 71.4
TAR623G1401 Trochodendron aralioides HOM05D006227 ORTHO05D007714 4.9e-28 127.5 78 71.8
ATR0712G069 Amborella trichopoda HOM05D006227 ORTHO05D007714 6.4e-28 127.1 78 74.4
Potri.004G189300 Populus trichocarpa HOM05D006227 ORTHO05D007714 6.4e-28 127.1 79 75.9
SGA_v2.0_scaffold45G17093 Striga asiatica HOM05D006227 ORTHO05D007714 6.4e-28 127.1 78 71.8
GSVIVG01023006001 Vitis vinifera HOM05D006227 ORTHO05D007714 6.4e-28 127.1 78 71.8
AUR62023956 Chenopodium quinoa HOM05D006227 ORTHO05D007714 8.4e-28 126.7 78 74.4
Atru.chr3.3392 Acer truncatum HOM05D006227 ORTHO05D007714 3.2e-27 124.8 78 73.1
EL10Ac9g21059 Beta vulgaris HOM05D006227 ORTHO05D007714 3.2e-27 124.8 78 73.1
CiPaw.13G141700 Carya illinoinensis HOM05D006227 ORTHO05D007714 4.2e-27 124.4 78 71.8
ClCG01G012780 Citrullus lanatus HOM05D006227 ORTHO05D007714 7.1e-27 123.6 78 67.9
QL01p013949 Quercus lobata HOM05D006227 ORTHO05D007714 7.1e-27 123.6 76 73.7
Ca_18451_v3 Cicer arietinum L. HOM05D006227 ORTHO05D007714 1.6e-26 122.5 78 70.5
Sc12g0004090 Simmondsia chinensis HOM05D006227 ORTHO05D007714 1.6e-26 122.5 75 73.3
Migut.D02328 Erythranthe guttata HOM05D006227 ORTHO05D007714 2.1e-26 122.1 78 70.5
Thecc.09G292900 Theobroma cacao HOM05D006227 ORTHO05D007714 2.1e-26 122.1 78 67.9
TPR.G13925 Trifolium pratense HOM05D006227 ORTHO05D007714 2.7e-26 121.7 78 70.5
Glyma.07G187100 Glycine max HOM05D006227 ORTHO05D007714 3.5e-26 121.3 79 65.8
Duzib170G0407 Durio zibethinus HOM05D006227 ORTHO05D007714 4.6e-26 120.9 78 70.5
Sc06g0007110 Simmondsia chinensis HOM05D006227 ORTHO05D007714 4.6e-26 120.9 75 72.0
Lalb_Chr09g0327121 Lupinus albus HOM05D006227 ORTHO05D007714 3.9e-25 117.9 74 70.3
VMungo0251G3527 Vigna mungo HOM05D006227 ORTHO05D007714 3.9e-25 117.9 77 68.8
FAN11G2712 Fragaria x ananassa HOM05D006227 ORTHO05D007714 5.1e-25 117.5 72 70.8
Hund07714 Selenicereus undatus HOM05D006227 ORTHO05D007714 5.1e-25 117.5 79 69.6
arahy.Tifrunner.gnm1.ann1.U4LPMY Arachis hypogaea HOM05D006227 ORTHO05D007714 8.7e-25 116.7 78 66.7
Duzib168G0197 Durio zibethinus HOM05D006227 ORTHO05D007714 8.7e-25 116.7 78 65.4
MSTRG.18723 Avicennia marina HOM05D006227 ORTHO05D007714 1.1e-24 116.3 78 67.9
CDE02G3751 Ceratophyllum demersum HOM05D006227 ORTHO05D007714 1.1e-24 116.3 75 68.0
Psat7g105560 Pisum sativum HOM05D006227 ORTHO05D007714 1.1e-24 116.3 78 69.2
Phvul.002G218500 Phaseolus vulgaris HOM05D006227 ORTHO05D007714 1.5e-24 115.9 77 67.5
FvH4_3g30110 Fragaria vesca HOM05D006227 ORTHO05D007714 1.9e-24 115.5 70 71.4
Psat7g105760 Pisum sativum HOM05D006227 ORTHO05D007714 2.5e-24 115.2 78 69.2
HPP92_003486 Vanilla planifolia HOM05D006227 ORTHO05D007714 3.3e-24 114.8 70 72.9
HPP92_026884 Vanilla planifolia HOM05D006227 ORTHO05D007714 3.3e-24 114.8 70 72.9
Duzib170G0945 Durio zibethinus HOM05D006227 ORTHO05D007714 5.6e-24 114.0 78 65.4
Gohir.A09G092200 Gossypium hirsutum HOM05D006227 ORTHO05D007714 5.6e-24 114.0 74 68.9
Gohir.D09G092300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 5.6e-24 114.0 74 68.9
Gorai.006G108900 Gossypium raimondii HOM05D006227 ORTHO05D007714 5.6e-24 114.0 74 68.9
unitig_899.g15369 Utricularia gibba HOM05D006227 ORTHO05D007714 1.6e-23 112.5 73 69.9
Gorai.006G108700 Gossypium raimondii HOM05D006227 ORTHO05D007714 2.8e-23 111.7 74 67.6
Aqoxy2G01473 Aquilegia oxysepala HOM05D006227 ORTHO05D007714 4.8e-23 110.9 78 67.9
Oeu023727.1 Olea europaea HOM05D006227 ORTHO05D007714 4.8e-23 110.9 73 72.6
Gohir.A03G000008 Gossypium hirsutum HOM05D006227 ORTHO05D007714 8.2e-23 110.2 74 67.6
Gohir.A04G148400 Gossypium hirsutum HOM05D006227 ORTHO05D007714 8.2e-23 110.2 74 67.6
Medtr3g014200 Medicago truncatula HOM05D006227 ORTHO05D007714 1.4e-22 109.4 79 63.3
arahy.Tifrunner.gnm1.ann1.ME5340 Arachis hypogaea HOM05D006227 ORTHO05D007714 1.8e-22 109.0 81 61.7
FAN16G3386 Fragaria x ananassa HOM05D006227 ORTHO05D007714 1.8e-22 109.0 79 64.6
THA.LOC104799532 Tarenaya hassleriana HOM05D006227 ORTHO05D007714 1.8e-22 109.0 75 65.3
Gohir.D09G092100 Gossypium hirsutum HOM05D006227 ORTHO05D007714 3.1e-22 108.2 72 68.1
PSO339G0999 Papaver somniferum HOM05D006227 ORTHO05D007714 4.0e-22 107.8 75 65.3
Medtr4g092090 Medicago truncatula HOM05D006227 ORTHO05D007714 9.0e-22 106.7 79 60.8
Pp3c23_15340 Physcomitrium patens HOM05D006227 ORTHO05D007714 3.4e-21 104.8 75 60.0
Os09g0516800 Oryza sativa ssp. japonica HOM05D006227 ORTHO05D007714 1.3e-20 102.8 73 58.9
AL7G27820 Arabidopsis lyrata HOM05D006227 ORTHO05D007714 3.8e-20 101.3 81 59.3
Gohir.A08G253700 Gossypium hirsutum HOM05D006227 ORTHO05D007714 3.8e-20 101.3 74 63.5
Gohir.A10G243300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 6.5e-20 100.5 74 62.2
C01p20840 Brassica napus HOM05D006227 ORTHO05D007714 1.1e-19 99.8 83 59.0
SalBow5G0633 Salvia bowleyana HOM05D006227 ORTHO05D007714 1.1e-19 99.8 73 60.3
SalBow5G1351 Salvia bowleyana HOM05D006227 ORTHO05D007714 1.1e-19 99.8 73 60.3
Thhalv10026551m.g Eutrema salsugineum HOM05D006227 ORTHO05D007714 1.9e-19 99.0 83 57.8
Sp7g23330 Schrenkiella parvula HOM05D006227 ORTHO05D007714 1.9e-19 99.0 77 59.7
Zm00001eb314390 Zea mays HOM05D006227 ORTHO05D007714 1.9e-19 99.0 72 59.7
A01p16610 Brassica napus HOM05D006227 ORTHO05D007714 2.5e-19 98.6 83 57.8
BolC7t45904H Brassica oleracea HOM05D006227 ORTHO05D007714 2.5e-19 98.6 83 55.4
BraA01t01616Z Brassica rapa HOM05D006227 ORTHO05D007714 2.5e-19 98.6 83 57.8
Aa31sc16G160 Aethionema arabicum HOM05D006227 ORTHO05D007714 3.2e-19 98.2 76 60.5
SEGI_33746 Sequoiadendron giganteum HOM05D006227 ORTHO05D007714 3.2e-19 98.2 78 56.4
CARHR232720 Cardamine hirsuta HOM05D006227 ORTHO05D007714 5.5e-19 97.4 77 57.1
AT4G25315 Arabidopsis thaliana HOM05D006227 ORTHO05D007714 9.3e-19 96.7 77 58.4
BraA03t14660Z Brassica rapa HOM05D006227 ORTHO05D007714 9.3e-19 96.7 77 58.4
BcaNung06163 Brassica carinata HOM05D006227 ORTHO05D007714 1.2e-18 96.3 77 58.4
A03p55890 Brassica napus HOM05D006227 ORTHO05D007714 2.1e-18 95.5 77 57.1
MBI01_g43174_MAGBIO Magnolia biondii HOM05D006227 ORTHO05D007714 2.7e-18 95.1 74 62.2
C07p54180 Brassica napus HOM05D006227 ORTHO05D007714 3.5e-18 94.7 77 55.8
Mapoly0046s0116 Marchantia polymorpha HOM05D006227 ORTHO05D007714 3.5e-18 94.7 75 54.7
Carub.0007s1570 Capsella rubella HOM05D006227 ORTHO05D007714 4.6e-18 94.4 77 57.1
Carub.0008s1058 Capsella rubella HOM05D006227 ORTHO05D007714 1.0e-17 93.2 76 57.9
BcaC06g32822 Brassica carinata HOM05D006227 ORTHO05D007714 3.9e-17 91.3 77 54.5
AagrBONN_evm.TU.Sc2ySwM_228.5102 Anthoceros agrestis HOM05D006227 ORTHO05D007714 2.5e-16 88.6 75 48.0
MD03G1133000 Malus domestica HOM05D006227 ORTHO05D007714 2.6e-13 78.6 40 85.0
CSS0004675 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 1.7e-12 75.9 42 78.6
Lsat_1_v5_gn_2_96480 Lactuca sativa HOM05D006227 ORTHO05D007714 3.8e-12 74.7 42 71.4
PGR119G0591 Punica granatum HOM05D006227 ORTHO05D007714 2.5e-11 72.0 40 72.5
Nn6g35079 Nelumbo nucifera HOM05D006227 ORTHO05D007714 2.1e-10 68.9 40 72.5
BolC1t02011H Brassica oleracea HOM05D006227 ORTHO05D007714 7.9e-10 67.0 83 44.6
Manes.04G009950 Manihot esculenta HOM05D006227 ORTHO05D007714 1.0e-09 66.6 40 70.0
CDE11G0759 Ceratophyllum demersum HOM05D006227 ORTHO05D129109 4.3e-08 61.2 52 55.8
SMO144G0106 Selaginella moellendorffii HOM05D006227 ORTHO05D007714 1.7e-07 59.3 77 35.1
Lalb_Chr16g0383271 Lupinus albus HOM05D006227 ORTHO05D007714 4.8e-07 57.8 49 53.1
RcHm_v2.0_Chr4g0411551 Rosa chinensis HOM05D000001 ORTHO05D000003 6.3e-07 57.4 61 47.5


User provided reference genes

Program Settings